RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 SPPL3Q8TCT6 385 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 NETO1Q8TDF5 533 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 PIGOQ8TEQ8 1089 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 Q96M66 194 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 SAMD11Q96NU1 681 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 CASD1Q96PB1 797 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 EIF2AK1Q9BQI3 630 aaKnown RBP6.58□□□□□ -1.36
CDHR3-213ENST00000488386 C11orf84Q9BUA3 381 aaPredicted RBP6.58□□□□□ -1.36
CDHR3-213ENST00000488386 APOL5Q9BWW9 433 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 TNKS2Q9H2K2 1166 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 EPHX3Q9H6B9 360 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 CWH43Q9H720 699 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 MINDY3Q9H8M7 445 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 ATP6V0A4Q9HBG4 840 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 POLD4Q9HCU8 107 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 LMCD1Q9NZU5 365 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 CCDC39Q9UFE4 941 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 COG5Q9UP83 839 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 LIMCH1Q9UPQ0 1083 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 PIN4Q9Y237 131 aaKnown RBP6.58□□□□□ -1.36
CDHR3-213ENST00000488386 CAPN6Q9Y6Q1 641 aa6.58□□□□□ -1.36
CDHR3-213ENST00000488386 FAM86C2PA6NEL3 165 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 B4GALT3O60512 393 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 NEMFO60524 1076 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 MED24O75448 989 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 SLITRK3O94933 977 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 BAG4O95429 457 aaKnown RBP6.57□□□□□ -1.36
CDHR3-213ENST00000488386 CBX7O95931 251 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 PRNPP04156 253 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 RPLP2P05387 115 aaKnown RBP6.57□□□□□ -1.36
CDHR3-213ENST00000488386 NME1P15531 152 aaKnown RBP6.57□□□□□ -1.36
CDHR3-213ENST00000488386 GCFC2P16383 781 aaKnown RBP6.57□□□□□ -1.36
CDHR3-213ENST00000488386 ZSCAN20P17040 1043 aaPredicted RBP6.57□□□□□ -1.36
CDHR3-213ENST00000488386 CA8P35219 290 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 TECP42680 631 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 NRIP1P48552 1158 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 NASPP49321 788 aaPredicted RBP6.57□□□□□ -1.36
CDHR3-213ENST00000488386 ERVFC1P60507 584 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 FAM189BP81408 668 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 BNIP3Q12983 259 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 EMC2Q15006 297 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 LEXMQ3ZCV2 418 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 CDCP2Q5VXM1 449 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 PLPP4Q5VZY2 271 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 TWF2Q6IBS0 349 aaKnown RBP6.57□□□□□ -1.36
CDHR3-213ENST00000488386 C22orf34Q6ZV56 151 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 NLRC3Q7RTR2 1065 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 CATSPER4Q7RTX7 472 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 TMEM173Q86WV6 379 aaPredicted RBP6.57□□□□□ -1.36
CDHR3-213ENST00000488386 CDR2LQ86X02 465 aaPredicted RBP6.57□□□□□ -1.36
CDHR3-213ENST00000488386 LSRQ86X29 649 aaPredicted RBP6.57□□□□□ -1.36
CDHR3-213ENST00000488386 THNSL1Q8IYQ7 743 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 COLGALT1Q8NBJ5 622 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 FEZF2Q8TBJ5 459 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 MICAL1Q8TDZ2 1067 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 CPB2Q96IY4 423 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 C8orf76Q96K31 380 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 CCDC74BQ96LY2 380 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 FAM20AQ96MK3 541 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 FERD3LQ96RJ6 166 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 GCOM2Q9BZD3 368 aaPredicted RBP6.57□□□□□ -1.36
CDHR3-213ENST00000488386 GBP3Q9H0R5 595 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 TTC12Q9H892 705 aaPredicted RBP6.57□□□□□ -1.36
CDHR3-213ENST00000488386 IFT122Q9HBG6 1241 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 GPRC5CQ9NQ84 441 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 XPNPEP1Q9NQW7 623 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 C1orf112Q9NSG2 853 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 TMEM161AQ9NX61 479 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 CDH22Q9UJ99 828 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 BARX2Q9UMQ3 279 aaPredicted RBP6.57□□□□□ -1.36
CDHR3-213ENST00000488386 COL4A3BPQ9Y5P4 624 aa6.57□□□□□ -1.36
CDHR3-213ENST00000488386 LOC100996750A0A140TA64 210 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 PP2D1A8MPX8 630 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 HIDE1A8MVS5 230 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 TBX3O15119 743 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 USO1O60763 962 aaKnown RBP6.56□□□□□ -1.36
CDHR3-213ENST00000488386 LRRN2O75325 713 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 FGF18O76093 207 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 GLP2RO95838 553 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 RB1P06400 928 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 ETV3P41162 512 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 DNM2P50570 870 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 LAMTOR4Q0VGL1 99 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 IFI16Q16666 785 aaKnown RBP6.56□□□□□ -1.36
CDHR3-213ENST00000488386 AAK1Q2M2I8 961 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 FBXW10Q5XX13 1052 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 FERMT3Q86UX7 667 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 C4orf19Q8IY42 314 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 ABI1Q8IZP0 508 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 FAM177A1Q8N128 213 aaPredicted RBP6.56□□□□□ -1.36
CDHR3-213ENST00000488386 MFSD4AQ8N468 514 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 FAM184AQ8NB25 1140 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 RNF149Q8NC42 400 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 VN1R2Q8NFZ6 395 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 NEK9Q8TD19 979 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 BCL7CQ8WUZ0 217 aaPredicted RBP6.56□□□□□ -1.36
CDHR3-213ENST00000488386 PRPF31Q8WWY3 499 aaKnown RBP6.56□□□□□ -1.36
CDHR3-213ENST00000488386 AUTS2Q8WXX7 1259 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 PABPC5Q96DU9 382 aaKnown RBP6.56□□□□□ -1.36
CDHR3-213ENST00000488386 MTMR9Q96QG7 549 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms