RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 ITGA11Q9UKX5 1188 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PCDHA7Q9UN72 937 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 LAMA1P25391 3075 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 POLR2DO15514 142 aaKnown RBP12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 TGFB1I1O43294 461 aa12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 LDHAP00338 332 aaKnown RBP12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 ALDH1A3P47895 512 aa12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 UBXN2BQ14CS0 331 aa12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 OSTM1Q86WC4 334 aa12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 METTL23Q86XA0 190 aa12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 IQUBQ8NA54 791 aa12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 STKLD1Q8NE28 680 aa12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 SPPL2BQ8TCT7 592 aa12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 C2orf15Q8WU43 125 aaKnown RBP12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 DEPDC1BQ8WUY9 529 aa12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 LEO1Q8WVC0 666 aaPredicted RBP12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 SCFD1Q8WVM8 642 aa12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 C7orf25Q9BPX7 421 aa12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 OSBPL6Q9BZF3 934 aa12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 GZF1Q9H116 711 aaPredicted RBP12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 SLITRK6Q9H5Y7 841 aa12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 AGPAT3Q9NRZ7 376 aa12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 ABI2Q9NYB9 513 aaPredicted RBP12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 HSPBP1Q9NZL4 362 aa12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 AGAP1Q9UPQ3 857 aa12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 ASB3Q9Y575 518 aa12.08□□□□□ -0.48
RAB11FIP3-210ENST00000487899 CACNA1AO00555 2505 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 EP300Q09472 2414 aaPredicted RBP12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 HEPACAM2A8MVW5 462 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 KIAA0391O15091 583 aaKnown RBP12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 ACTN4O43707 911 aaKnown RBP12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 PSMC3P17980 439 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 ACAT1P24752 427 aaKnown RBP12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 GABRR2P28476 465 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 GDI1P31150 447 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 CYP4F8P98187 520 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 DNM1Q05193 864 aaKnown RBP12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 FCHO2Q0JRZ9 810 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 BFSP1Q12934 665 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 FZD5Q13467 585 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 BMT2Q1RMZ1 405 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 MGAT5BQ3V5L5 792 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 STXBP4Q6ZWJ1 553 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 UNC13DQ70J99 1090 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 LIMS2Q7Z4I7 341 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 DNAJB7Q7Z6W7 309 aaPredicted RBP12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 TMEM150AQ86TG1 271 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 C1orf210Q8IVY1 113 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 GRAMD1CQ8IYS0 662 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 ZNF507Q8TCN5 953 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 NOC3LQ8WTT2 800 aaKnown RBP12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 KBTBD7Q8WVZ9 684 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 NKD2Q969F2 451 aaPredicted RBP12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 CLDN23Q96B33 292 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 CHAMP1Q96JM3 812 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 LRRC3BQ96PB8 259 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 TRMT61BQ9BVS5 477 aaKnown RBP12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 BLZF1Q9H2G9 400 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 BRD9Q9H8M2 597 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 TRPV5Q9NQA5 729 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 INTS13Q9NVM9 706 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 GDAP2Q9NXN4 497 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 ZDHHC9Q9Y397 364 aa12.07□□□□□ -0.48
RAB11FIP3-210ENST00000487899 PTPRZ1P23471 2315 aaPredicted RBP12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 GPR179Q6PRD1 2367 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 SPAG17Q6Q759 2223 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 ATG2BQ96BY7 2078 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 GABRDO14764 452 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 KLRC4O43908 158 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 TADA3O75528 432 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 HSP90AA1P07900 732 aaKnown RBP12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 TMEM191BP0C7N4 346 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 SP9P0CG40 484 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 HAPLN1P10915 354 aaPredicted RBP12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 PDIA4P13667 645 aaKnown RBP12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 HMGA1P17096 107 aaKnown RBP12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 ME1P48163 572 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 GPR15P49685 360 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 CUL4BQ13620 913 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 SNRNP35Q16560 246 aaKnown RBP12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 WDR44Q5JSH3 913 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 INTS6LQ5JSJ4 861 aaKnown RBP12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 ITIH5Q86UX2 942 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 WDR49Q8IV35 697 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 ARID3BQ8IVW6 561 aaPredicted RBP12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 MFSD6LQ8IWD5 586 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 NELFCDQ8IXH7 590 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 ADGRF2Q8IZF7 708 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 TMEM86AQ8N2M4 240 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 TOP6BLQ8N6T0 577 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 SPRYD3Q8NCJ5 442 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 IRF7Q92985 503 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 LRRC27Q9C0I9 530 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 PRMT8Q9NR22 394 aaPredicted RBP12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 DDX43Q9NXZ2 648 aaKnown RBP12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 NME7Q9Y5B8 376 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 SNX9Q9Y5X1 595 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 PIAS3Q9Y6X2 628 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 R4GN57 208 aa12.06□□□□□ -0.48
RAB11FIP3-210ENST00000487899 FAM170BA6NMN3 283 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms