RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 SCNN1GP51170 649 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 RNASE9P60153 205 aaKnown RBP5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 STARD3Q14849 445 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 GGT6Q6P531 493 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 HTR3DQ70Z44 454 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 BEND5Q7L4P6 421 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 RHOT2Q8IXI1 618 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 SDR16C5Q8N3Y7 309 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 OR56A1Q8NGH5 318 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 SPSB4Q96A44 273 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 TMEM41AQ96HV5 264 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 SLC46A1Q96NT5 459 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 TRIB1Q96RU8 372 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 PNKPQ96T60 521 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 SMOQ99835 787 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 TTYH3Q9C0H2 523 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 HSFX1Q9UBD0 423 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 ZNF212Q9UDV6 495 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 MID2Q9UJV3 735 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 HDAC9Q9UKV0 1011 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 MAGED2Q9UNF1 606 aaPredicted RBP5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 MAN2B2Q9Y2E5 1009 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 ATP11BQ9Y2G3 1177 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 FANCD2Q9BXW9 1451 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 WIZO95785 1651 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 AREL1O15033 823 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 DCLK1O15075 740 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 PIP5K1CO60331 668 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 PLA2G6O60733 806 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 ZNF623O75123 536 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 CHRM3P20309 590 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 HIBADHP31937 336 aaKnown RBP5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 VIPR2P41587 438 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 PIGFQ07326 219 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 ZNF844Q08AG5 666 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 ELF2Q15723 593 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 TAPT1Q6NXT6 567 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 CATSPERGQ6ZRH7 1159 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 ANKRD42Q8N9B4 389 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 PSD4Q8NDX1 1056 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 LRRC46Q96FV0 321 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 FAM89AQ96GI7 184 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 RBM15Q96T37 977 aaKnown RBP eCLIP5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 ZSWIM1Q9BR11 485 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 HERPUD2Q9BSE4 406 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 XDHP47989 1333 aa5.95□□□□□ -1.46
PRPF38A-203ENST00000487160 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 A0A1B0GTW7 788 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 RAB27BO00194 218 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 MYL4P12829 197 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 XRCC6P12956 609 aaKnown RBP eCLIP5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 BTF3P20290 206 aaKnown RBP5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 FGFR4P22455 802 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 IL1R2P27930 398 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 CHKAP35790 457 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 MAN2A2P49641 1150 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 WNT3P56703 355 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 HSD11B2P80365 405 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 SLC29A2Q14542 456 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 ICAM4Q14773 271 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 IQCB1Q15051 598 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 PUM3Q15397 648 aaKnown RBP5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 C4orf46Q504U0 113 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 TAF2Q6P1X5 1199 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 PGBD2Q6P3X8 592 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 YAF2Q8IY57 180 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 VGLL2Q8N8G2 317 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 ZNF527Q8NB42 609 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 FANCBQ8NB91 859 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 ZNF483Q8TF39 744 aaPredicted RBP5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 IPCEF1Q8WWN9 437 aaPredicted RBP5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 TEPSINQ96N21 525 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 MESP1Q9BRJ9 268 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 TEX101Q9BY14 249 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 KRTAP4-6Q9BYQ5 205 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 AS3MTQ9HBK9 375 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 CTTNBP2NLQ9P2B4 639 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 EIF2B4Q9UI10 523 aaKnown RBP5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 RAD54BQ9Y620 910 aa5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 MORC2Q9Y6X9 1032 aaPredicted RBP5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 URB2Q14146 1524 aaKnown RBP5.94□□□□□ -1.46
PRPF38A-203ENST00000487160 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.93□□□□□ -1.46
PRPF38A-203ENST00000487160 CLCA1A8K7I4 914 aa5.93□□□□□ -1.46
PRPF38A-203ENST00000487160 CYP27B1O15528 508 aa5.93□□□□□ -1.46
PRPF38A-203ENST00000487160 FFAR2O15552 330 aa5.93□□□□□ -1.46
PRPF38A-203ENST00000487160 NDST3O95803 873 aa5.93□□□□□ -1.46
PRPF38A-203ENST00000487160 A1BGP04217 495 aa5.93□□□□□ -1.46
PRPF38A-203ENST00000487160 ITGB3P05106 788 aa5.93□□□□□ -1.46
PRPF38A-203ENST00000487160 CYP2C9P11712 490 aa5.93□□□□□ -1.46
PRPF38A-203ENST00000487160 TYRP1P17643 537 aa5.93□□□□□ -1.46
PRPF38A-203ENST00000487160 ALDH9A1P49189 494 aa5.93□□□□□ -1.46
PRPF38A-203ENST00000487160 ICA1Q05084 483 aa5.93□□□□□ -1.46
PRPF38A-203ENST00000487160 GRM1Q13255 1194 aa5.93□□□□□ -1.46
PRPF38A-203ENST00000487160 CNGB1Q14028 1251 aaPredicted RBP5.93□□□□□ -1.46
PRPF38A-203ENST00000487160 PDCD2Q16342 344 aaPredicted RBP5.93□□□□□ -1.46
PRPF38A-203ENST00000487160 PDCD4Q53EL6 469 aaKnown RBP5.93□□□□□ -1.46
PRPF38A-203ENST00000487160 PLA1AQ53H76 456 aa5.93□□□□□ -1.46
PRPF38A-203ENST00000487160 ZNF280BQ86YH2 543 aa5.93□□□□□ -1.46
PRPF38A-203ENST00000487160 POC1BQ8TC44 478 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms