RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 KIF3CO14782 793 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 B4GALT5O43286 388 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 HBP1O60381 514 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 CNGA2Q16280 664 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 Q3C1V9 767 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 CCDC38Q502W7 563 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 EEF1DP3Q658K8 133 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 KAZNQ674X7 775 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 SPOCD1Q6ZMY3 1216 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 FOXP3Q9BZS1 431 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 INO80BQ9C086 356 aaPredicted RBP19■□□□□ 0.63
PDLIM7-207ENST00000486828 DDX56Q9NY93 547 aaKnown RBP19■□□□□ 0.63
PDLIM7-207ENST00000486828 STRIP2Q9ULQ0 834 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 KCNH4Q9UQ05 1017 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 IL18RAPO95256 599 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 GJB1P08034 283 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 ATF7P17544 494 aaPredicted RBP19■□□□□ 0.63
PDLIM7-207ENST00000486828 OSTNP61366 133 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 MBTD1Q05BQ5 628 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 TMEM132AQ24JP5 1023 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 CEP128Q6ZU80 1094 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 CCDC121Q6ZUS5 278 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 ANKRD13AQ8IZ07 590 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 CEP120Q8N960 986 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 ZNF668Q96K58 619 aaPredicted RBP19■□□□□ 0.63
PDLIM7-207ENST00000486828 PWWP2AQ96N64 755 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 CDT1Q9H211 546 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 DNPEPQ9ULA0 475 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 TNFSF13BQ9Y275 285 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 ASAP2O43150 1006 aa18.99■□□□□ 0.63
PDLIM7-207ENST00000486828 LACTBP83111 547 aaPredicted RBP18.99■□□□□ 0.63
PDLIM7-207ENST00000486828 P3H1Q32P28 736 aa18.99■□□□□ 0.63
PDLIM7-207ENST00000486828 MAP1SQ66K74 1059 aaPredicted RBP18.99■□□□□ 0.63
PDLIM7-207ENST00000486828 EFCAB12Q6NXP0 572 aa18.99■□□□□ 0.63
PDLIM7-207ENST00000486828 COPS5Q92905 334 aa18.99■□□□□ 0.63
PDLIM7-207ENST00000486828 ARHGEF2Q92974 986 aaKnown RBP18.99■□□□□ 0.63
PDLIM7-207ENST00000486828 PRMT1Q99873 361 aaKnown RBP18.99■□□□□ 0.63
PDLIM7-207ENST00000486828 LHX5Q9H2C1 402 aa18.99■□□□□ 0.63
PDLIM7-207ENST00000486828 CAPN7Q9Y6W3 813 aa18.99■□□□□ 0.63
PDLIM7-207ENST00000486828 ANK1P16157 1881 aa18.99■□□□□ 0.63
PDLIM7-207ENST00000486828 hCG_1818297A0A087WSY0 165 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 TXNP10599 105 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 CLCN3P51790 818 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 CYP4A22Q5TCH4 519 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 DENND1BQ6P3S1 775 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 PRUNE1Q86TP1 453 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 ZCCHC9Q8N567 271 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 NFKBIZQ9BYH8 718 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 RPF1Q9H9Y2 349 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 TMEM51Q9NW97 253 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 NXF1Q9UBU9 619 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 POLIQ9UNA4 740 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 DRG1Q9Y295 367 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 MED7O43513 233 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 CXCL8P10145 99 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 POLR2BP30876 1174 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 ACTN3Q08043 901 aaPredicted RBP18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 PPIL2Q13356 520 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 TFDP3Q5H9I0 405 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 TXNRD3NBQ6F5E7 133 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 CDR2LQ86X02 465 aaPredicted RBP18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 ALLCQ8N6M5 410 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 KAT2BQ92831 832 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 FAXDC2Q96IV6 333 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 BCO2Q9BYV7 579 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 MINDY3Q9H8M7 445 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 LGALS13Q9UHV8 139 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 ZNF148Q9UQR1 794 aa18.98■□□□□ 0.63
PDLIM7-207ENST00000486828 LOC102724159A0A0B4J2E5 919 aa18.97■□□□□ 0.63
PDLIM7-207ENST00000486828 DNALI1O14645 258 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-207ENST00000486828 OSBPP22059 807 aa18.97■□□□□ 0.63
PDLIM7-207ENST00000486828 CDKN2BP42772 138 aa18.97■□□□□ 0.63
PDLIM7-207ENST00000486828 MOGSQ13724 837 aa18.97■□□□□ 0.63
PDLIM7-207ENST00000486828 PWP2Q15269 919 aaKnown RBP18.97■□□□□ 0.63
PDLIM7-207ENST00000486828 PTPN20Q4JDL3 420 aa18.97■□□□□ 0.63
PDLIM7-207ENST00000486828 ZNF667Q5HYK9 610 aa18.97■□□□□ 0.63
PDLIM7-207ENST00000486828 POLNQ7Z5Q5 900 aa18.97■□□□□ 0.63
PDLIM7-207ENST00000486828 TMEM192Q8IY95 271 aa18.97■□□□□ 0.63
PDLIM7-207ENST00000486828 LRRC34Q8IZ02 419 aa18.97■□□□□ 0.63
PDLIM7-207ENST00000486828 CDCA5Q96FF9 252 aa18.97■□□□□ 0.63
PDLIM7-207ENST00000486828 MROH8Q9H579 483 aa18.97■□□□□ 0.63
PDLIM7-207ENST00000486828 ACTR5Q9H9F9 607 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-207ENST00000486828 CTNNAL1Q9UBT7 734 aa18.97■□□□□ 0.63
PDLIM7-207ENST00000486828 SIX4Q9UIU6 781 aa18.97■□□□□ 0.63
PDLIM7-207ENST00000486828 SIGLEC16A6NMB1 481 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 C22orf31O95567 290 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 KRT19P08727 400 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 CD19P15391 556 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 RAP1GAPP47736 663 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 VCPP55072 806 aaKnown RBP18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 TTLL4Q14679 1199 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 STAT4Q14765 748 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 TMEM63BQ5T3F8 832 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 CHADLQ6NUI6 762 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 VSTM1Q6UX27 236 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 PIGWQ7Z7B1 504 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 CNPY4Q8N129 248 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 GLIS1Q8NBF1 620 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 CCDC197Q8NCU1 140 aa18.96■□□□□ 0.63
PDLIM7-207ENST00000486828 P3H4Q92791 437 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms