RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 MFN1Q8IWA4 741 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 GSPT2Q8IYD1 628 aaKnown RBP6.03□□□□□ -1.44
COPS3-209ENST00000486810 PQLC1Q8N2U9 271 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 AFAP1Q8N556 730 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 ARL6IP6Q8N6S5 226 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 ZNF397Q8NF99 534 aaPredicted RBP6.03□□□□□ -1.44
COPS3-209ENST00000486810 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.03□□□□□ -1.44
COPS3-209ENST00000486810 CTCFLQ8NI51 663 aaPredicted RBP6.03□□□□□ -1.44
COPS3-209ENST00000486810 TEKT4Q8WW24 435 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 ARHGAP45Q92619 1136 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 SLC35B4Q969S0 331 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 DTNBP1Q96EV8 351 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 SMAD5Q99717 465 aaKnown RBP6.03□□□□□ -1.44
COPS3-209ENST00000486810 SLC13A1Q9BZW2 595 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 EPC1Q9H2F5 836 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 MMADHCQ9H3L0 296 aaPredicted RBP6.03□□□□□ -1.44
COPS3-209ENST00000486810 ZSCAN16Q9H4T2 348 aaPredicted RBP6.03□□□□□ -1.44
COPS3-209ENST00000486810 LDAHQ9H6V9 325 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 BATF3Q9NR55 127 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 TRMT1Q9NXH9 659 aaKnown RBP6.03□□□□□ -1.44
COPS3-209ENST00000486810 LCMT1Q9UIC8 334 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 G3BP2Q9UN86 482 aaKnown RBP6.03□□□□□ -1.44
COPS3-209ENST00000486810 DNM3Q9UQ16 869 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 TTLL3Q9Y4R7 772 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 PNPLA7Q6ZV29 1317 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 RSF1Q96T23 1441 aaPredicted RBP6.02□□□□□ -1.45
COPS3-209ENST00000486810 GOLGA6L10A6NI86 522 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 CXorf49A8MYA2 514 aaPredicted RBP6.02□□□□□ -1.45
COPS3-209ENST00000486810 KIF2AO00139 706 aaPredicted RBP6.02□□□□□ -1.45
COPS3-209ENST00000486810 EIF3FO00303 357 aaPredicted RBP6.02□□□□□ -1.45
COPS3-209ENST00000486810 SGTAO43765 313 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 AMY1AP04745 511 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 FPR1P21462 350 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 IL4RP24394 825 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 PSMA3P25788 255 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 PTPN7P35236 360 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 WASP42768 502 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 FLT3LGP49771 235 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 CCT8P50990 548 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 NEK2P51955 445 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 SLC8A3P57103 927 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 CRHR2Q13324 411 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 ACAP2Q15057 778 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 VPS72Q15906 364 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 FAM47AQ5JRC9 791 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 RRP12Q5JTH9 1297 aaKnown RBP6.02□□□□□ -1.45
COPS3-209ENST00000486810 METTL24Q5JXM2 366 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 CCDC158Q5M9N0 1113 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 SKAP1Q86WV1 359 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 BRSK2Q8IWQ3 736 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 ZGPATQ8N5A5 531 aaKnown RBP6.02□□□□□ -1.45
COPS3-209ENST00000486810 ARL10Q8N8L6 244 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 STON2Q8WXE9 905 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 SSH1Q8WYL5 1049 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 LRRC45Q96CN5 670 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 SAAL1Q96ER3 474 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 NAP1L3Q99457 506 aaPredicted RBP6.02□□□□□ -1.45
COPS3-209ENST00000486810 KRTAP4-11Q9BYQ6 195 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 SLC7A5P2Q9GIP4 190 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 VPS11Q9H270 941 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 RABEP2Q9H5N1 569 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 ZNHIT6Q9NWK9 470 aaKnown RBP6.02□□□□□ -1.45
COPS3-209ENST00000486810 SERPINB13Q9UIV8 391 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 SLC45A1Q9Y2W3 748 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.02□□□□□ -1.45
COPS3-209ENST00000486810 UHRF1BP1LA0JNW5 1464 aa6.02□□□□□ -1.45
COPS3-209ENST00000486810 EIF3CLB5ME19 914 aaKnown RBP6.01□□□□□ -1.45
COPS3-209ENST00000486810 XPOTO43592 962 aaKnown RBP6.01□□□□□ -1.45
COPS3-209ENST00000486810 PLIN1O60240 522 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 PYGLP06737 847 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 IDO1P14902 403 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 PCSK1P29120 753 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 TCF7P36402 384 aaPredicted RBP6.01□□□□□ -1.45
COPS3-209ENST00000486810 NCBP1Q09161 790 aaKnown RBP6.01□□□□□ -1.45
COPS3-209ENST00000486810 BIRC3Q13489 604 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 BMT2Q1RMZ1 405 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 BOLA3Q53S33 107 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 FNDC7Q5VTL7 733 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 METRNLQ641Q3 311 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 LRRC31Q6UY01 552 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 DAAM2Q86T65 1068 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 WDR63Q8IWG1 891 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 RPAP2Q8IXW5 612 aaPredicted RBP6.01□□□□□ -1.45
COPS3-209ENST00000486810 RAVER1Q8IY67 606 aaKnown RBP6.01□□□□□ -1.45
COPS3-209ENST00000486810 NGDNQ8NEJ9 315 aaKnown RBP6.01□□□□□ -1.45
COPS3-209ENST00000486810 EIF3CQ99613 913 aaKnown RBP6.01□□□□□ -1.45
COPS3-209ENST00000486810 CAPS2Q9BXY5 557 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 TSGA10Q9BZW7 698 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 VCX3BQ9H321 246 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 ZHX3Q9H4I2 956 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 CASS4Q9NQ75 786 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 AURKAIP1Q9NWT8 199 aaPredicted RBP6.01□□□□□ -1.45
COPS3-209ENST00000486810 DDX25Q9UHL0 483 aaKnown RBP6.01□□□□□ -1.45
COPS3-209ENST00000486810 CFAP45Q9UL16 551 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 INTUQ9ULD6 942 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 LIMCH1Q9UPQ0 1083 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 SSX2IPQ9Y2D8 614 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 IPPQ9Y573 584 aa6.01□□□□□ -1.45
COPS3-209ENST00000486810 AKNAQ7Z591 1439 aa6□□□□□ -1.45
COPS3-209ENST00000486810 GOLGA6L10A0A0M3HER8 536 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms