RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 HS6ST3Q8IZP7 471 aa13.84□□□□□ -0.19
CHMP3-208ENST00000486404 TTC9BQ8N6N2 239 aa13.84□□□□□ -0.19
CHMP3-208ENST00000486404 SPATA18Q8TC71 538 aa13.84□□□□□ -0.19
CHMP3-208ENST00000486404 GPR152Q8TDT2 470 aa13.84□□□□□ -0.19
CHMP3-208ENST00000486404 TCEAL4Q96EI5 215 aa13.84□□□□□ -0.19
CHMP3-208ENST00000486404 RTP3Q9BQQ7 232 aa13.84□□□□□ -0.19
CHMP3-208ENST00000486404 CRISPLD1Q9H336 500 aa13.84□□□□□ -0.19
CHMP3-208ENST00000486404 ARHGEF3Q9NR81 526 aa13.84□□□□□ -0.19
CHMP3-208ENST00000486404 GDAP2Q9NXN4 497 aa13.84□□□□□ -0.19
CHMP3-208ENST00000486404 HSFX1Q9UBD0 423 aa13.84□□□□□ -0.19
CHMP3-208ENST00000486404 ASB3Q9Y575 518 aa13.84□□□□□ -0.19
CHMP3-208ENST00000486404 PCDHB5Q9Y5E4 795 aa13.84□□□□□ -0.19
CHMP3-208ENST00000486404 CALUO43852 315 aaPredicted RBP13.83□□□□□ -0.2
CHMP3-208ENST00000486404 ECI2O75521 394 aa13.83□□□□□ -0.2
CHMP3-208ENST00000486404 MICAL2O94851 1124 aa13.83□□□□□ -0.2
CHMP3-208ENST00000486404 ZNF202O95125 648 aa13.83□□□□□ -0.2
CHMP3-208ENST00000486404 FGF19O95750 216 aa13.83□□□□□ -0.2
CHMP3-208ENST00000486404 NR3C1P04150 777 aa13.83□□□□□ -0.2
CHMP3-208ENST00000486404 ACAT1P24752 427 aaKnown RBP13.83□□□□□ -0.2
CHMP3-208ENST00000486404 CCR2P41597 374 aa13.83□□□□□ -0.2
CHMP3-208ENST00000486404 LHX1P48742 406 aa13.83□□□□□ -0.2
CHMP3-208ENST00000486404 PTPN5P54829 565 aa13.83□□□□□ -0.2
CHMP3-208ENST00000486404 TNNC1P63316 161 aa13.83□□□□□ -0.2
CHMP3-208ENST00000486404 PFKPQ01813 784 aa13.83□□□□□ -0.2
CHMP3-208ENST00000486404 ARHGAP15Q53QZ3 475 aa13.83□□□□□ -0.2
CHMP3-208ENST00000486404 INTS6LQ5JSJ4 861 aaKnown RBP13.83□□□□□ -0.2
CHMP3-208ENST00000486404 TRAPPC11Q7Z392 1133 aa13.83□□□□□ -0.2
CHMP3-208ENST00000486404 BORCS6Q96GS4 357 aa13.83□□□□□ -0.2
CHMP3-208ENST00000486404 MMS19Q96T76 1030 aa13.83□□□□□ -0.2
CHMP3-208ENST00000486404 LPIN3Q9BQK8 851 aa13.83□□□□□ -0.2
CHMP3-208ENST00000486404 SLC2A4RGQ9NR83 387 aa13.83□□□□□ -0.2
CHMP3-208ENST00000486404 WNT16Q9UBV4 365 aa13.83□□□□□ -0.2
CHMP3-208ENST00000486404 FRMD4BQ9Y2L6 1034 aa13.83□□□□□ -0.2
CHMP3-208ENST00000486404 A0A1W2PRU2 124 aa13.82□□□□□ -0.2
CHMP3-208ENST00000486404 PDXKO00764 312 aa13.82□□□□□ -0.2
CHMP3-208ENST00000486404 RHOBTB3O94955 611 aa13.82□□□□□ -0.2
CHMP3-208ENST00000486404 GJA1P17302 382 aa13.82□□□□□ -0.2
CHMP3-208ENST00000486404 AVPR2P30518 371 aa13.82□□□□□ -0.2
CHMP3-208ENST00000486404 EPHA5P54756 1037 aa13.82□□□□□ -0.2
CHMP3-208ENST00000486404 DPYDQ12882 1025 aa13.82□□□□□ -0.2
CHMP3-208ENST00000486404 TEAD2Q15562 447 aa13.82□□□□□ -0.2
CHMP3-208ENST00000486404 CEP135Q66GS9 1140 aa13.82□□□□□ -0.2
CHMP3-208ENST00000486404 CWF19L1Q69YN2 538 aaKnown RBP13.82□□□□□ -0.2
CHMP3-208ENST00000486404 SPATA2LQ8IUW3 424 aaPredicted RBP13.82□□□□□ -0.2
CHMP3-208ENST00000486404 CXorf38Q8TB03 319 aa13.82□□□□□ -0.2
CHMP3-208ENST00000486404 PSMG2Q969U7 264 aa13.82□□□□□ -0.2
CHMP3-208ENST00000486404 ACBD6Q9BR61 282 aa13.82□□□□□ -0.2
CHMP3-208ENST00000486404 PI4K2AQ9BTU6 479 aa13.82□□□□□ -0.2
CHMP3-208ENST00000486404 DNAJC25Q9H1X3 360 aa13.82□□□□□ -0.2
CHMP3-208ENST00000486404 TBC1D17Q9HA65 648 aa13.82□□□□□ -0.2
CHMP3-208ENST00000486404 ZFP14Q9HCL3 533 aa13.82□□□□□ -0.2
CHMP3-208ENST00000486404 RMND1Q9NWS8 449 aa13.82□□□□□ -0.2
CHMP3-208ENST00000486404 HOOK1Q9UJC3 728 aaKnown RBP13.82□□□□□ -0.2
CHMP3-208ENST00000486404 HAPLN1P10915 354 aaPredicted RBP13.81□□□□□ -0.2
CHMP3-208ENST00000486404 ATF6P18850 670 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 GABRR2P28476 465 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 CDC25CP30307 473 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 AP3M2P53677 418 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 KCNB1Q14721 858 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 SOWAHAQ2M3V2 549 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 FAM78AQ5JUQ0 283 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 OSTM1Q86WC4 334 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 TMC8Q8IU68 726 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 TMEM105Q8N8V8 129 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 PRSS33Q8NF86 280 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 SHKBP1Q8TBC3 707 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 ZSCAN18Q8TBC5 510 aaPredicted RBP13.81□□□□□ -0.2
CHMP3-208ENST00000486404 SMARCD2Q92925 531 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 SYAP1Q96A49 352 aaPredicted RBP13.81□□□□□ -0.2
CHMP3-208ENST00000486404 ELSPBP1Q96BH3 223 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 SHDQ96IW2 340 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 ASB16Q96NS5 453 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 SYT15Q9BQS2 421 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 RPP25Q9BUL9 199 aaKnown RBP13.81□□□□□ -0.2
CHMP3-208ENST00000486404 GPR88Q9GZN0 384 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 SNX25Q9H3E2 840 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 KCTD10Q9H3F6 313 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 ATXN3LQ9H3M9 355 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 ABCB6Q9NP58 842 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 MYH10P35580 1976 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 COL4A2P08572 1712 aa13.81□□□□□ -0.2
CHMP3-208ENST00000486404 HELZP42694 1942 aaKnown RBP13.8□□□□□ -0.2
CHMP3-208ENST00000486404 GREB1Q4ZG55 1949 aa13.8□□□□□ -0.2
CHMP3-208ENST00000486404 KRBA1A5PL33 1030 aa13.8□□□□□ -0.2
CHMP3-208ENST00000486404 SMC2O95347 1197 aa13.8□□□□□ -0.2
CHMP3-208ENST00000486404 AOC1P19801 751 aa13.8□□□□□ -0.2
CHMP3-208ENST00000486404 NR2F2P24468 414 aa13.8□□□□□ -0.2
CHMP3-208ENST00000486404 CASP4P49662 377 aa13.8□□□□□ -0.2
CHMP3-208ENST00000486404 CLCN5P51795 746 aa13.8□□□□□ -0.2
CHMP3-208ENST00000486404 NUBP1P53384 320 aa13.8□□□□□ -0.2
CHMP3-208ENST00000486404 PSMC1P62191 440 aaKnown RBP13.8□□□□□ -0.2
CHMP3-208ENST00000486404 RPL10AP62906 217 aaKnown RBP13.8□□□□□ -0.2
CHMP3-208ENST00000486404 GPC5P78333 572 aa13.8□□□□□ -0.2
CHMP3-208ENST00000486404 FAM160A1Q05DH4 1040 aa13.8□□□□□ -0.2
CHMP3-208ENST00000486404 PNOCQ13519 176 aa13.8□□□□□ -0.2
CHMP3-208ENST00000486404 SNW1Q13573 536 aaKnown RBP13.8□□□□□ -0.2
CHMP3-208ENST00000486404 GRM2Q14416 872 aa13.8□□□□□ -0.2
CHMP3-208ENST00000486404 MAPRE1Q15691 268 aaKnown RBP13.8□□□□□ -0.2
CHMP3-208ENST00000486404 ZNF699Q32M78 642 aa13.8□□□□□ -0.2
CHMP3-208ENST00000486404 WDR72Q3MJ13 1102 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms