RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 NPR3P17342 541 aa18.96■□□□□ 0.63
COL6A1-204ENST00000486023 TRPC3Q13507 836 aa18.96■□□□□ 0.63
COL6A1-204ENST00000486023 GRM2Q14416 872 aa18.96■□□□□ 0.63
COL6A1-204ENST00000486023 VEPH1Q14D04 833 aa18.96■□□□□ 0.63
COL6A1-204ENST00000486023 PSMD6Q15008 389 aa18.96■□□□□ 0.63
COL6A1-204ENST00000486023 ITIH5Q86UX2 942 aa18.96■□□□□ 0.63
COL6A1-204ENST00000486023 OSTM1Q86WC4 334 aa18.96■□□□□ 0.63
COL6A1-204ENST00000486023 ADGRF2Q8IZF7 708 aa18.96■□□□□ 0.63
COL6A1-204ENST00000486023 GOLGA5Q8TBA6 731 aa18.96■□□□□ 0.63
COL6A1-204ENST00000486023 SHKBP1Q8TBC3 707 aa18.96■□□□□ 0.63
COL6A1-204ENST00000486023 CGRRF1Q99675 332 aa18.96■□□□□ 0.63
COL6A1-204ENST00000486023 KCNH6Q9H252 994 aa18.96■□□□□ 0.63
COL6A1-204ENST00000486023 ZFP14Q9HCL3 533 aa18.96■□□□□ 0.63
COL6A1-204ENST00000486023 ARHGEF3Q9NR81 526 aa18.96■□□□□ 0.63
COL6A1-204ENST00000486023 CGNQ9P2M7 1197 aaKnown RBP18.96■□□□□ 0.63
COL6A1-204ENST00000486023 GTF3C4Q9UKN8 822 aa18.96■□□□□ 0.63
COL6A1-204ENST00000486023 H0Y858 1186 aa18.95■□□□□ 0.62
COL6A1-204ENST00000486023 MOSPD3O75425 235 aa18.95■□□□□ 0.62
COL6A1-204ENST00000486023 PDGFRBP09619 1106 aa18.95■□□□□ 0.62
COL6A1-204ENST00000486023 GABRR2P28476 465 aa18.95■□□□□ 0.62
COL6A1-204ENST00000486023 VIPR2P41587 438 aa18.95■□□□□ 0.62
COL6A1-204ENST00000486023 CLCN5P51795 746 aa18.95■□□□□ 0.62
COL6A1-204ENST00000486023 SOWAHAQ2M3V2 549 aa18.95■□□□□ 0.62
COL6A1-204ENST00000486023 SDHAF4Q5VUM1 108 aa18.95■□□□□ 0.62
COL6A1-204ENST00000486023 CEP135Q66GS9 1140 aa18.95■□□□□ 0.62
COL6A1-204ENST00000486023 CWF19L1Q69YN2 538 aaKnown RBP18.95■□□□□ 0.62
COL6A1-204ENST00000486023 TMEM86AQ8N2M4 240 aa18.95■□□□□ 0.62
COL6A1-204ENST00000486023 TOP6BLQ8N6T0 577 aa18.95■□□□□ 0.62
COL6A1-204ENST00000486023 LEMD2Q8NC56 503 aa18.95■□□□□ 0.62
COL6A1-204ENST00000486023 STKLD1Q8NE28 680 aa18.95■□□□□ 0.62
COL6A1-204ENST00000486023 ZSCAN18Q8TBC5 510 aaPredicted RBP18.95■□□□□ 0.62
COL6A1-204ENST00000486023 SPPL2BQ8TCT7 592 aa18.95■□□□□ 0.62
COL6A1-204ENST00000486023 PSMG2Q969U7 264 aa18.95■□□□□ 0.62
COL6A1-204ENST00000486023 TBC1D17Q9HA65 648 aa18.95■□□□□ 0.62
COL6A1-204ENST00000486023 ZNF334Q9HCZ1 680 aaPredicted RBP18.95■□□□□ 0.62
COL6A1-204ENST00000486023 GDAP2Q9NXN4 497 aa18.95■□□□□ 0.62
COL6A1-204ENST00000486023 MAGED2Q9UNF1 606 aaPredicted RBP18.95■□□□□ 0.62
COL6A1-204ENST00000486023 SCN1AP35498 2009 aa18.95■□□□□ 0.62
COL6A1-204ENST00000486023 ANK1P16157 1881 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 FAM237AA0A1B0GTK4 181 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 MYL1P05976 194 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 ATF6P18850 670 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 LHX1P48742 406 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 GPR15P49685 360 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 PTPN5P54829 565 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 NHLH1Q02575 133 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 DPYDQ12882 1025 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 BIRC3Q13489 604 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 CCDC142Q17RM4 750 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 SLC44A4Q53GD3 710 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 STXBP5Q5T5C0 1151 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 TMC8Q8IU68 726 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 ZNF516Q92618 1163 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 ATOH1Q92858 354 aaPredicted RBP18.94■□□□□ 0.62
COL6A1-204ENST00000486023 SMARCD2Q92925 531 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 PRRX2Q99811 253 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 ACBD6Q9BR61 282 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 SLC2A4RGQ9NR83 387 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 FAM86C1Q9NVL1 165 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 NXF1Q9UBU9 619 aaKnown RBP18.94■□□□□ 0.62
COL6A1-204ENST00000486023 ASB3Q9Y575 518 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 MUC6Q6W4X9 2439 aa18.94■□□□□ 0.62
COL6A1-204ENST00000486023 ATP2C2O75185 946 aa18.93■□□□□ 0.62
COL6A1-204ENST00000486023 ECI2O75521 394 aa18.93■□□□□ 0.62
COL6A1-204ENST00000486023 MICAL2O94851 1124 aa18.93■□□□□ 0.62
COL6A1-204ENST00000486023 NR3C1P04150 777 aa18.93■□□□□ 0.62
COL6A1-204ENST00000486023 HAPLN1P10915 354 aaPredicted RBP18.93■□□□□ 0.62
COL6A1-204ENST00000486023 AOC1P19801 751 aa18.93■□□□□ 0.62
COL6A1-204ENST00000486023 CYP2F1P24903 491 aa18.93■□□□□ 0.62
COL6A1-204ENST00000486023 LMO2P25791 158 aa18.93■□□□□ 0.62
COL6A1-204ENST00000486023 PSMC1P62191 440 aaKnown RBP18.93■□□□□ 0.62
COL6A1-204ENST00000486023 TCF15Q12870 199 aa18.93■□□□□ 0.62
COL6A1-204ENST00000486023 NFE2Q16621 373 aaPredicted RBP18.93■□□□□ 0.62
COL6A1-204ENST00000486023 DDR2Q16832 855 aa18.93■□□□□ 0.62
COL6A1-204ENST00000486023 INTS6LQ5JSJ4 861 aaKnown RBP18.93■□□□□ 0.62
COL6A1-204ENST00000486023 GPR158Q5T848 1215 aa18.93■□□□□ 0.62
COL6A1-204ENST00000486023 SPATA2LQ8IUW3 424 aaPredicted RBP18.93■□□□□ 0.62
COL6A1-204ENST00000486023 C12orf56Q8IXR9 622 aa18.93■□□□□ 0.62
COL6A1-204ENST00000486023 C2orf15Q8WU43 125 aaKnown RBP18.93■□□□□ 0.62
COL6A1-204ENST00000486023 ELSPBP1Q96BH3 223 aa18.93■□□□□ 0.62
COL6A1-204ENST00000486023 ELMO3Q96BJ8 720 aa18.93■□□□□ 0.62
COL6A1-204ENST00000486023 CCDC34Q96HJ3 373 aa18.93■□□□□ 0.62
COL6A1-204ENST00000486023 ASB16Q96NS5 453 aa18.93■□□□□ 0.62
COL6A1-204ENST00000486023 LRRC3Q9BY71 257 aa18.93■□□□□ 0.62
COL6A1-204ENST00000486023 SNX25Q9H3E2 840 aa18.93■□□□□ 0.62
COL6A1-204ENST00000486023 BRD9Q9H8M2 597 aa18.93■□□□□ 0.62
COL6A1-204ENST00000486023 MYBPHLA2RUH7 354 aa18.92■□□□□ 0.62
COL6A1-204ENST00000486023 PDXKO00764 312 aa18.92■□□□□ 0.62
COL6A1-204ENST00000486023 CALUO43852 315 aaPredicted RBP18.92■□□□□ 0.62
COL6A1-204ENST00000486023 DCNP07585 359 aaKnown RBP18.92■□□□□ 0.62
COL6A1-204ENST00000486023 CD72P21854 359 aa18.92■□□□□ 0.62
COL6A1-204ENST00000486023 PCSK1P29120 753 aa18.92■□□□□ 0.62
COL6A1-204ENST00000486023 EPHA5P54756 1037 aa18.92■□□□□ 0.62
COL6A1-204ENST00000486023 MYL6P60660 151 aa18.92■□□□□ 0.62
COL6A1-204ENST00000486023 TNNC1P63316 161 aa18.92■□□□□ 0.62
COL6A1-204ENST00000486023 CYP4F8P98187 520 aa18.92■□□□□ 0.62
COL6A1-204ENST00000486023 SMARCB1Q12824 385 aa18.92■□□□□ 0.62
COL6A1-204ENST00000486023 PNOCQ13519 176 aa18.92■□□□□ 0.62
COL6A1-204ENST00000486023 WDR72Q3MJ13 1102 aa18.92■□□□□ 0.62
COL6A1-204ENST00000486023 ALYREFQ86V81 257 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms