RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 WDFY4Q6ZS81 3184 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 MTMR11A4FU01 709 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 GOLGA8IPA6NC78 632 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 GOLGA8JA6NMD2 632 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 MAPK13O15264 365 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 HUS1O60921 280 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 ECI2O75521 394 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 RHOBTB3O94955 611 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 KIF20AO95235 890 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 FGF19O95750 216 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 CPB1P15086 417 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 PFKFB1P16118 471 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 NPR3P17342 541 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 SYKP43405 635 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 AFMP43652 599 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 ALDH1A3P47895 512 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 LHX1P48742 406 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 AP3M2P53677 418 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 EPHB3P54753 998 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 MLLT6P55198 1093 aaPredicted RBP7.54□□□□□ -1.2
VPS50-218ENST00000485994 ARPP19P56211 112 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 WNT7BP56706 349 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 STARD6P59095 220 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 NTHL1P78549 312 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 TFAMQ00059 246 aaKnown RBP7.54□□□□□ -1.2
VPS50-218ENST00000485994 ENPEPQ07075 957 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 MYO1EQ12965 1108 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 STK4Q13043 487 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 DUSP4Q13115 394 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 KCNB1Q14721 858 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 PSMD6Q15008 389 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 NFIL3Q16649 462 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 FOXD4L6Q3SYB3 417 aaPredicted RBP7.54□□□□□ -1.2
VPS50-218ENST00000485994 FOXD4L3Q6VB84 417 aaPredicted RBP7.54□□□□□ -1.2
VPS50-218ENST00000485994 HS2ST1Q7LGA3 356 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 WDR49Q8IV35 697 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 NPAS3Q8IXF0 933 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 ELOA2Q8IYF1 753 aaPredicted RBP7.54□□□□□ -1.2
VPS50-218ENST00000485994 DCP1BQ8IZD4 617 aaKnown RBP7.54□□□□□ -1.2
VPS50-218ENST00000485994 TMEM130Q8N3G9 435 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 TOP6BLQ8N6T0 577 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 ITFG1Q8TB96 612 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 RSAD2Q8WXG1 361 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 FGF14Q92915 247 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 HPS3Q969F9 1004 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 PSMG2Q969U7 264 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 E2F7Q96AV8 911 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 CEP295NLQ96MC4 621 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 OSBPL6Q9BZF3 934 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 BLZF1Q9H2G9 400 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 KCTD10Q9H3F6 313 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 SLC39A2Q9NP94 309 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 TRPV5Q9NQA5 729 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 SIX4Q9UIU6 781 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 ZMYM5Q9UJ78 669 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 POLIQ9UNA4 740 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 AGAP1Q9UPQ3 857 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 TRAF3IP3Q9Y228 551 aa7.54□□□□□ -1.2
VPS50-218ENST00000485994 MRPS23Q9Y3D9 190 aaKnown RBP7.54□□□□□ -1.2
VPS50-218ENST00000485994 IKBKBO14920 756 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 MOSPD3O75425 235 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 ZNF202O95125 648 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 CST3P01034 146 aaPredicted RBP7.53□□□□□ -1.2
VPS50-218ENST00000485994 TNNC2P02585 160 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 ITGB3P05106 788 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 TMEM191BP0C7N4 346 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 HAPLN1P10915 354 aaPredicted RBP7.53□□□□□ -1.2
VPS50-218ENST00000485994 AOC1P19801 751 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 ATICP31939 592 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 NDUFA8P51970 172 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 PFKPQ01813 784 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 PRKCQQ04759 706 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 CYP24A1Q07973 514 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 TWF1Q12792 350 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 DPYDQ12882 1025 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 SNRNP35Q16560 246 aaKnown RBP7.53□□□□□ -1.2
VPS50-218ENST00000485994 NFE2Q16621 373 aaPredicted RBP7.53□□□□□ -1.2
VPS50-218ENST00000485994 SLC5A9Q2M3M2 681 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 SOWAHAQ2M3V2 549 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 KMT5BQ4FZB7 885 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 WSCD1Q658N2 575 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 FAM171BQ6P995 826 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 PARM1Q6UWI2 310 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 KRBA2Q6ZNG9 492 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 PDZD4Q76G19 769 aaPredicted RBP7.53□□□□□ -1.2
VPS50-218ENST00000485994 GET4Q7L5D6 327 aaPredicted RBP7.53□□□□□ -1.2
VPS50-218ENST00000485994 TRAPPC11Q7Z392 1133 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 DNAJB7Q7Z6W7 309 aaPredicted RBP7.53□□□□□ -1.2
VPS50-218ENST00000485994 ITIH5Q86UX2 942 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 LRRTM3Q86VH5 581 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 CBWD2Q8IUF1 395 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 ATAD1Q8NBU5 361 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 OR10T2Q8NGX3 314 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 PARD3BQ8TEW8 1205 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 ELSPBP1Q96BH3 223 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 FAM122AQ96E09 287 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 CCDC34Q96HJ3 373 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 SHDQ96IW2 340 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 ASB16Q96NS5 453 aa7.53□□□□□ -1.2
VPS50-218ENST00000485994 EPAS1Q99814 870 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms