RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 NT5C1BQ96P26 610 aa16.56■□□□□ 0.24
RPUSD3-217ENST00000485705 CDCA3Q99618 268 aaPredicted RBP16.56■□□□□ 0.24
RPUSD3-217ENST00000485705 LPIN3Q9BQK8 851 aa16.56■□□□□ 0.24
RPUSD3-217ENST00000485705 ZCWPW1Q9H0M4 648 aa16.56■□□□□ 0.24
RPUSD3-217ENST00000485705 SNX25Q9H3E2 840 aa16.56■□□□□ 0.24
RPUSD3-217ENST00000485705 HMGXB4Q9UGU5 601 aa16.56■□□□□ 0.24
RPUSD3-217ENST00000485705 MYH10P35580 1976 aa16.56■□□□□ 0.24
RPUSD3-217ENST00000485705 PTPRDP23468 1912 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 LGALS16A8MUM7 142 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 GOLGA6L19H0YKK7 550 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 VNN2O95498 520 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 GLUD1P00367 558 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 FAM163BP0C2L3 166 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 CPB1P15086 417 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 CD58P19256 250 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 PSMC1P62191 440 aaKnown RBP16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 DLX2Q07687 328 aaPredicted RBP16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 ORC1Q13415 861 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 ADAM15Q13444 863 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 CUL2Q13617 745 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 SKIV2LQ15477 1246 aaKnown RBP16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 CTC1Q2NKJ3 1217 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 DPY19L2P1Q6NXN4 242 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 TRIM65Q6PJ69 517 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 RNF19BQ6ZMZ0 732 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 RRAGAQ7L523 313 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 GAS2L3Q86XJ1 694 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 PGLYRP2Q96PD5 576 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 ACBD6Q9BR61 282 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 DPEP3Q9H4B8 488 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 CYP3A43Q9HB55 503 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 TMLHEQ9NVH6 421 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 CLDND1Q9NY35 253 aa16.55■□□□□ 0.24
RPUSD3-217ENST00000485705 MYBPHLA2RUH7 354 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 TBX10O75333 385 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 ABLIM3O94929 683 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 TPM2P07951 284 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 LTBRP36941 435 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 KLK7P49862 253 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 NDST1P52848 882 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 COL19A1Q14993 1142 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 PTPN21Q16825 1174 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 SLC39A12Q504Y0 691 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 INTS6LQ5JSJ4 861 aaKnown RBP16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 EP400NLQ6ZTU2 488 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 PPFIBP1Q86W92 1011 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 PPM1KQ8N3J5 372 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 FEZF2Q8TBJ5 459 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 WHAMMQ8TF30 809 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 KREMEN1Q96MU8 473 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 NAP1L5Q96NT1 182 aaPredicted RBP16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 TWNKQ96RR1 684 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 PKMYT1Q99640 499 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 SYT15Q9BQS2 421 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 OXCT2Q9BYC2 517 aaPredicted RBP16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 CRISPLD1Q9H336 500 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 SIX2Q9NPC8 291 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 CRTAC1Q9NQ79 661 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 PRDM6Q9NQX0 595 aa16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 BARX2Q9UMQ3 279 aaPredicted RBP16.54■□□□□ 0.24
RPUSD3-217ENST00000485705 A8MXQ7 604 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 TEX33O43247 280 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 SEC24AO95486 1093 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 PCSK1P29120 753 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 TPM4P67936 248 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 FANCCQ00597 558 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 TSPY1Q01534 308 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 INCA1Q0VD86 236 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 GPR17Q13304 367 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 TTC9BQ8N6N2 239 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 UBR7Q8N806 425 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 ATAD1Q8NBU5 361 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 KREMEN2Q8NCW0 462 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 ZNF461Q8TAF7 563 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 PABPC5Q96DU9 382 aaKnown RBP16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 FAXDC2Q96IV6 333 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 LSM14BQ9BX40 385 aaKnown RBP16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 ELOVL4Q9GZR5 314 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 UBE2TQ9NPD8 197 aaPredicted RBP16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 RTN4Q9NQC3 1192 aaKnown RBP16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 MAN1C1Q9NR34 630 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 CISHQ9NSE2 258 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 CLEC1BQ9P126 229 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 FBXW11Q9UKB1 542 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 AJAP1Q9UKB5 411 aaPredicted RBP16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 GTF3C4Q9UKN8 822 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 CDH9Q9ULB4 789 aa16.53■□□□□ 0.24
RPUSD3-217ENST00000485705 XIRP2A4UGR9 3374 aa16.52■□□□□ 0.24
RPUSD3-217ENST00000485705 C2orf16Q68DN1 1984 aa16.52■□□□□ 0.24
RPUSD3-217ENST00000485705 MTMR11A4FU01 709 aa16.52■□□□□ 0.24
RPUSD3-217ENST00000485705 DLL1O00548 723 aa16.52■□□□□ 0.24
RPUSD3-217ENST00000485705 CILPO75339 1184 aa16.52■□□□□ 0.24
RPUSD3-217ENST00000485705 ATF2P15336 505 aa16.52■□□□□ 0.24
RPUSD3-217ENST00000485705 UBXN1Q04323 297 aa16.52■□□□□ 0.24
RPUSD3-217ENST00000485705 ADCY1Q08828 1119 aa16.52■□□□□ 0.24
RPUSD3-217ENST00000485705 FKBP15Q5T1M5 1219 aa16.52■□□□□ 0.24
RPUSD3-217ENST00000485705 TPGS2Q68CL5 300 aa16.52■□□□□ 0.24
RPUSD3-217ENST00000485705 FAM171BQ6P995 826 aa16.52■□□□□ 0.24
RPUSD3-217ENST00000485705 TMEM184AQ6ZMB5 413 aa16.52■□□□□ 0.24
RPUSD3-217ENST00000485705 ACOT1Q86TX2 421 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms