RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 GNL1P36915 607 aaPredicted RBP10.13□□□□□ -0.79
CTSA-208ENST00000485627 TERF1P54274 439 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 RAD23BP54727 409 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 CENPCQ03188 943 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 TLE2Q04725 743 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 SOX4Q06945 474 aaPredicted RBP10.13□□□□□ -0.79
CTSA-208ENST00000485627 GRIK3Q13003 919 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 MBTPS1Q14703 1052 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 DSTYKQ6XUX3 929 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 DPH6Q7L8W6 267 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 DAAM2Q86T65 1068 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 UNC93AQ86WB7 457 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 MCOLN2Q8IZK6 566 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 SLC4A11Q8NBS3 891 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 TPCN2Q8NHX9 752 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 DDX27Q96GQ7 796 aaKnown RBP10.13□□□□□ -0.79
CTSA-208ENST00000485627 VCPIP1Q96JH7 1222 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 UROC1Q96N76 676 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 C11orf49Q9H6J7 331 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 PRDM6Q9NQX0 595 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 ADAM22Q9P0K1 906 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 KANSL3Q9P2N6 904 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 UVRAGQ9P2Y5 699 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 CNOT8Q9UFF9 292 aaKnown RBP10.13□□□□□ -0.79
CTSA-208ENST00000485627 SALL4Q9UJQ4 1053 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 CDC23Q9UJX2 597 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 GTF3C4Q9UKN8 822 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 LRFN2Q9ULH4 789 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 PCDHGC3Q9UN70 934 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 ATP11BQ9Y2G3 1177 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 PCDHGC5Q9Y5F6 944 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 SAR1BQ9Y6B6 198 aa10.13□□□□□ -0.79
CTSA-208ENST00000485627 SPTBN5Q9NRC6 3674 aaKnown RBP10.13□□□□□ -0.79
CTSA-208ENST00000485627 ARHGEF37A1IGU5 675 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 CASTOR2A6NHX0 329 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 ATP1A1P05023 1023 aaKnown RBP10.12□□□□□ -0.79
CTSA-208ENST00000485627 CYP1A2P05177 515 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 CALB1P05937 261 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 FAM163BP0C2L3 166 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 COL6A1P12109 1028 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 TCP1P17987 556 aaKnown RBP10.12□□□□□ -0.79
CTSA-208ENST00000485627 SSTR3P32745 418 aaPredicted RBP10.12□□□□□ -0.79
CTSA-208ENST00000485627 LILRA4P59901 499 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 NOMO3P69849 1222 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 RNASELQ05823 741 aaKnown RBP10.12□□□□□ -0.79
CTSA-208ENST00000485627 ORC1Q13415 861 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 TUSC3Q13454 348 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 WHAMMP3Q1A5X7 153 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 TRIM60Q495X7 471 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 PLEKHG4Q58EX7 1191 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 C1orf53Q5VUE5 145 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 PEX26Q7Z412 305 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 ZNF598Q86UK7 904 aaKnown RBP10.12□□□□□ -0.79
CTSA-208ENST00000485627 ERICH1Q86X53 443 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 ADGRF2Q8IZF7 708 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 ABI1Q8IZP0 508 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 TOP6BLQ8N6T0 577 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 CEP112Q8N8E3 955 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 DBF4BQ8NFT6 615 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 MYRIPQ8NFW9 859 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 ZNF564Q8TBZ8 553 aaPredicted RBP10.12□□□□□ -0.79
CTSA-208ENST00000485627 WHAMMQ8TF30 809 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 ARHGEF26Q96DR7 871 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 TNIP3Q96KP6 325 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 FAM193BQ96PV7 902 aaPredicted RBP10.12□□□□□ -0.79
CTSA-208ENST00000485627 MRPL45Q9BRJ2 306 aaKnown RBP10.12□□□□□ -0.79
CTSA-208ENST00000485627 NUP85Q9BW27 656 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 PPP1R12CQ9BZL4 782 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 ELOVL4Q9GZR5 314 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 LHX5Q9H2C1 402 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 SYNCQ9H7C4 482 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 L2HGDHQ9H9P8 463 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 MRPL47Q9HD33 250 aaKnown RBP10.12□□□□□ -0.79
CTSA-208ENST00000485627 TMEM39AQ9NV64 488 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 MIOSQ9NXC5 875 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 HESX1Q9UBX0 185 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 AMFRQ9UKV5 643 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 HYOU1Q9Y4L1 999 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 PCDHB7Q9Y5E2 793 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 MRFAP1Q9Y605 127 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 SCINQ9Y6U3 715 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 PRUNE2Q8WUY3 3088 aa10.12□□□□□ -0.79
CTSA-208ENST00000485627 TTC28Q96AY4 2481 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 LAMA2P24043 3122 aaKnown RBP10.11□□□□□ -0.79
CTSA-208ENST00000485627 GRID2IPA4D2P6 1211 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 M0QYV0 167 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 HOXA2O43364 376 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 NBNO60934 754 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 KIF4AO95239 1232 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 FTCDO95954 541 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 ODC1P11926 461 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 CLCNKBP51801 687 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 CCL23P55773 120 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 SNX16P57768 344 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 FAM189BP81408 668 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 CKAP4Q07065 602 aaKnown RBP10.11□□□□□ -0.79
CTSA-208ENST00000485627 FAAP100Q0VG06 881 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 TCEAL1Q15170 157 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 RPS6KA1Q15418 735 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 CNGA2Q16280 664 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms