RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 KCNK17Q96T54 332 aa8.39□□□□□ -1.07
MACF1-220ENST00000485063 DNAI2Q9GZS0 605 aa8.39□□□□□ -1.07
MACF1-220ENST00000485063 CLSTN2Q9H4D0 955 aa8.39□□□□□ -1.07
MACF1-220ENST00000485063 POMKQ9H5K3 350 aa8.39□□□□□ -1.07
MACF1-220ENST00000485063 METTL14Q9HCE5 456 aaKnown RBP8.39□□□□□ -1.07
MACF1-220ENST00000485063 LMBRD1Q9NUN5 540 aa8.39□□□□□ -1.07
MACF1-220ENST00000485063 DDX43Q9NXZ2 648 aaKnown RBP8.39□□□□□ -1.07
MACF1-220ENST00000485063 DACH1Q9UI36 760 aa8.39□□□□□ -1.07
MACF1-220ENST00000485063 SIX4Q9UIU6 781 aa8.39□□□□□ -1.07
MACF1-220ENST00000485063 VPS9D1Q9Y2B5 631 aa8.39□□□□□ -1.07
MACF1-220ENST00000485063 USTQ9Y2C2 406 aa8.39□□□□□ -1.07
MACF1-220ENST00000485063 DENND4AQ7Z401 1863 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 CLUHO75153 1309 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 CCL16O15467 120 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 STAU1O95793 577 aaKnown RBP8.38□□□□□ -1.07
MACF1-220ENST00000485063 MBD3O95983 291 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 C4BPAP04003 597 aaKnown RBP8.38□□□□□ -1.07
MACF1-220ENST00000485063 FAM163BP0C2L3 166 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 OR4Q2P0C623 313 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 PTPN2P17706 415 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 GBP2P32456 591 aaPredicted RBP8.38□□□□□ -1.07
MACF1-220ENST00000485063 TUFMP49411 452 aaKnown RBP8.38□□□□□ -1.07
MACF1-220ENST00000485063 MYL6P60660 151 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 DLG4P78352 724 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 PAK1Q13153 545 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 NCOA4Q13772 614 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 MAPRE1Q15691 268 aaKnown RBP8.38□□□□□ -1.07
MACF1-220ENST00000485063 TAF12Q16514 161 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 NFE2Q16621 373 aaPredicted RBP8.38□□□□□ -1.07
MACF1-220ENST00000485063 TPD52L1Q16890 204 aaPredicted RBP8.38□□□□□ -1.07
MACF1-220ENST00000485063 ZNF699Q32M78 642 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 CCDC40Q4G0X9 1142 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 SLC39A12Q504Y0 691 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 DCAF17Q5H9S7 520 aaPredicted RBP8.38□□□□□ -1.07
MACF1-220ENST00000485063 ZNF667Q5HYK9 610 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 TDRD10Q5VZ19 366 aaKnown RBP8.38□□□□□ -1.07
MACF1-220ENST00000485063 PDCL2Q8N4E4 241 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 CXorf38Q8TB03 319 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 SPPL2BQ8TCT7 592 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 NELFBQ8WX92 580 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 TAF4BQ92750 862 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 ZNF512Q96ME7 567 aaPredicted RBP8.38□□□□□ -1.07
MACF1-220ENST00000485063 CEP63Q96MT8 703 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 NECAB3Q96P71 396 aaPredicted RBP8.38□□□□□ -1.07
MACF1-220ENST00000485063 PGLYRP2Q96PD5 576 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 ACBD6Q9BR61 282 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 ZCWPW1Q9H0M4 648 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 SNX25Q9H3E2 840 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 MMRN2Q9H8L6 949 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 WDR6Q9NNW5 1121 aaKnown RBP8.38□□□□□ -1.07
MACF1-220ENST00000485063 HSFX1Q9UBD0 423 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 NXF1Q9UBU9 619 aaKnown RBP8.38□□□□□ -1.07
MACF1-220ENST00000485063 ARMCX3Q9UH62 379 aaPredicted RBP8.38□□□□□ -1.07
MACF1-220ENST00000485063 L1RE1Q9UN81 338 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 CTNND2Q9UQB3 1225 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 INSL5Q9Y5Q6 135 aa8.38□□□□□ -1.07
MACF1-220ENST00000485063 EYSQ5T1H1 3165 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 REV3LO60673 3130 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 MTMR11A4FU01 709 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 TRIM49BA6NDI0 452 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 LOC730098B7Z3J9 87 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 PPP1R3GB7ZBB8 358 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 ZNF197O14709 1029 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 TACC1O75410 805 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 GNA14O95837 355 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 POU2F2P09086 479 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 TRIM49P0CI25 452 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 TRIM49CP0CI26 452 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 CCDC192P0DO97 292 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 ALADP13716 330 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 SP100P23497 879 aaPredicted RBP8.37□□□□□ -1.07
MACF1-220ENST00000485063 FSHRP23945 695 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 GTF2H1P32780 548 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 GNL1P36915 607 aaPredicted RBP8.37□□□□□ -1.07
MACF1-220ENST00000485063 EPHB3P54753 998 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 TWF1Q12792 350 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 CETN1Q12798 172 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 DUSP4Q13115 394 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 VEPH1Q14D04 833 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 SOWAHAQ2M3V2 549 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 MGAT5BQ3V5L5 792 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 ZACNQ401N2 412 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 PABPC1LQ4VXU2 614 aaKnown RBP8.37□□□□□ -1.07
MACF1-220ENST00000485063 CYP4A22Q5TCH4 519 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 KRT39Q6A163 491 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 FOXR2Q6PJQ5 311 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 C4orf50Q6ZRC1 276 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 SV2AQ7L0J3 742 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 GET4Q7L5D6 327 aaPredicted RBP8.37□□□□□ -1.07
MACF1-220ENST00000485063 GRASPQ7Z6J2 395 aaPredicted RBP8.37□□□□□ -1.07
MACF1-220ENST00000485063 FRMD5Q7Z6J6 570 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 FILIP1Q7Z7B0 1213 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 ITIH5Q86UX2 942 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 SPATA2LQ8IUW3 424 aaPredicted RBP8.37□□□□□ -1.07
MACF1-220ENST00000485063 MLKLQ8NB16 471 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 LEMD2Q8NC56 503 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 OR6B3Q8NGW1 331 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 OR10T2Q8NGX3 314 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 FAM200AQ8TCP9 573 aa8.37□□□□□ -1.07
MACF1-220ENST00000485063 PLEKHO2Q8TD55 490 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms