RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 DPYSL4O14531 572 aa12.35□□□□□ -0.43
SCFD1-206ENST00000484733 EXTL3O43909 919 aa12.35□□□□□ -0.43
SCFD1-206ENST00000484733 PAPSS2O95340 614 aaPredicted RBP12.35□□□□□ -0.43
SCFD1-206ENST00000484733 GCNT3O95395 438 aa12.35□□□□□ -0.43
SCFD1-206ENST00000484733 STAT6P42226 847 aa12.35□□□□□ -0.43
SCFD1-206ENST00000484733 LRRC32Q14392 662 aa12.35□□□□□ -0.43
SCFD1-206ENST00000484733 DGKKQ5KSL6 1271 aa12.35□□□□□ -0.43
SCFD1-206ENST00000484733 RALGPS2Q86X27 583 aaPredicted RBP12.35□□□□□ -0.43
SCFD1-206ENST00000484733 TMEM86AQ8N2M4 240 aa12.35□□□□□ -0.43
SCFD1-206ENST00000484733 FAM200AQ8TCP9 573 aa12.35□□□□□ -0.43
SCFD1-206ENST00000484733 LRRC3BQ96PB8 259 aa12.35□□□□□ -0.43
SCFD1-206ENST00000484733 GCNAQ96QF7 691 aa12.35□□□□□ -0.43
SCFD1-206ENST00000484733 ACBD6Q9BR61 282 aa12.35□□□□□ -0.43
SCFD1-206ENST00000484733 LRRC27Q9C0I9 530 aa12.35□□□□□ -0.43
SCFD1-206ENST00000484733 GDAP2Q9NXN4 497 aa12.35□□□□□ -0.43
SCFD1-206ENST00000484733 ITGA11Q9UKX5 1188 aa12.35□□□□□ -0.43
SCFD1-206ENST00000484733 DENND4CQ5VZ89 1909 aa12.35□□□□□ -0.43
SCFD1-206ENST00000484733 A0A087X0B3 334 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 CCNE1P24864 410 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 DDX6P26196 483 aaKnown RBP eCLIP12.34□□□□□ -0.43
SCFD1-206ENST00000484733 CASP5P51878 434 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 WNT7BP56706 349 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 NFE2Q16621 373 aaPredicted RBP12.34□□□□□ -0.43
SCFD1-206ENST00000484733 KIAA2013Q8IYS2 634 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 C1orf127Q8N9H9 656 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 BPIFB1Q8TDL5 484 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 ABCB6Q9NP58 842 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 TBC1D7Q9P0N9 293 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 PTPRZ1P23471 2315 aaPredicted RBP12.34□□□□□ -0.43
SCFD1-206ENST00000484733 F11P03951 625 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 IDEP14735 1019 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 HMGA1P17096 107 aaKnown RBP12.34□□□□□ -0.43
SCFD1-206ENST00000484733 KPNA1P52294 538 aaPredicted RBP12.34□□□□□ -0.43
SCFD1-206ENST00000484733 TSPY1Q01534 308 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 CEBPZQ03701 1054 aaKnown RBP12.34□□□□□ -0.43
SCFD1-206ENST00000484733 CCDC65Q8IXS2 484 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 SYCP3Q8IZU3 236 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 PDCL2Q8N4E4 241 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 SPEM1Q8N4L4 309 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 ZSWIM2Q8NEG5 633 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 SECISBP2LQ93073 1101 aaKnown RBP12.34□□□□□ -0.43
SCFD1-206ENST00000484733 SAAL1Q96ER3 474 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 SLC46A2Q9BY10 475 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 TNMDQ9H2S6 317 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 CUEDC2Q9H467 287 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 RBAKQ9NYW8 714 aaPredicted RBP12.34□□□□□ -0.43
SCFD1-206ENST00000484733 AGAP1Q9UPQ3 857 aa12.34□□□□□ -0.43
SCFD1-206ENST00000484733 SPECC1L-ADORA2AF8WAN1 911 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 STX6O43752 255 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 PPP6R2O75170 966 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 POLR2BP30876 1174 aaKnown RBP12.33□□□□□ -0.44
SCFD1-206ENST00000484733 RBP5P82980 135 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 TFAMQ00059 246 aaKnown RBP12.33□□□□□ -0.44
SCFD1-206ENST00000484733 SURF1Q15526 300 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 CNNM4Q6P4Q7 775 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 TSSK4Q6SA08 328 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 LIMS2Q7Z4I7 341 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 GPD1LQ8N335 351 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 SYNPOQ8N3V7 929 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 DCLK2Q8N568 766 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 TOP6BLQ8N6T0 577 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 CELF5Q8N6W0 485 aaKnown RBP12.33□□□□□ -0.44
SCFD1-206ENST00000484733 LINC00301Q8NCQ3 95 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 RMDN1Q96DB5 314 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 PKMYT1Q99640 499 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 HINFPQ9BQA5 517 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 TMLHEQ9NVH6 421 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 THG1LQ9NWX6 298 aaKnown RBP12.33□□□□□ -0.44
SCFD1-206ENST00000484733 NCDNQ9UBB6 729 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 L1RE1Q9UN81 338 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 SMG5Q9UPR3 1016 aaKnown RBP12.33□□□□□ -0.44
SCFD1-206ENST00000484733 RIF1Q5UIP0 2472 aaKnown RBP12.33□□□□□ -0.44
SCFD1-206ENST00000484733 K7ELQ4 463 aaPredicted RBP12.33□□□□□ -0.44
SCFD1-206ENST00000484733 HUS1O60921 280 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 ITGB3P05106 788 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 CSH1P0DML2 217 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 CSH2P0DML3 217 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 CTHP32929 405 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 CXCL12P48061 93 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 NLRP12P59046 1061 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 CYP4F8P98187 520 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 MYL7Q01449 175 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 PUM1Q14671 1186 aaKnown RBP eCLIP12.33□□□□□ -0.44
SCFD1-206ENST00000484733 TAF12Q16514 161 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 STXBP4Q6ZWJ1 553 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 DPH6Q7L8W6 267 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 TMEM150AQ86TG1 271 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 GIPC2Q8TF65 315 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 CBWD1Q9BRT8 395 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 FGFBP2Q9BYJ0 223 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 KIF9Q9HAQ2 790 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 KBTBD4Q9NVX7 518 aa12.33□□□□□ -0.44
SCFD1-206ENST00000484733 ABI2Q9NYB9 513 aaPredicted RBP12.33□□□□□ -0.44
SCFD1-206ENST00000484733 GABRDO14764 452 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 NOL4O94818 638 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 PRAMEF12O95522 483 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 LHX1P48742 406 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 GAS6Q14393 721 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 ZNF268Q14587 947 aaPredicted RBP12.32□□□□□ -0.44
SCFD1-206ENST00000484733 WDR44Q5JSH3 913 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 308.9 ms