RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 KRBA1A5PL33 1030 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 GOLGA6L4A6NEF3 574 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 GABRDO14764 452 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 NPR3P17342 541 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 ATF6P18850 670 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 TUFMP49411 452 aaKnown RBP13.85□□□□□ -0.19
HDAC1-209ENST00000484305 GPC5P78333 572 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 TSPY1Q01534 308 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 PNOCQ13519 176 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 SNW1Q13573 536 aaKnown RBP13.85□□□□□ -0.19
HDAC1-209ENST00000484305 MGAT5BQ3V5L5 792 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 LIMS2Q7Z4I7 341 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 DNAJB7Q7Z6W7 309 aaPredicted RBP13.85□□□□□ -0.19
HDAC1-209ENST00000484305 TMC8Q8IU68 726 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 SLC9A9Q8IVB4 645 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 DCP1BQ8IZD4 617 aaKnown RBP13.85□□□□□ -0.19
HDAC1-209ENST00000484305 ADGRF2Q8IZF7 708 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 LEMD2Q8NC56 503 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 ENGASEQ8NFI3 743 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 SHKBP1Q8TBC3 707 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 TMEM174Q8WUU8 243 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 CCDC47Q96A33 483 aaKnown RBP13.85□□□□□ -0.19
HDAC1-209ENST00000484305 LPIN3Q9BQK8 851 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 ACBD6Q9BR61 282 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 PLA2G2FQ9BZM2 168 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 MFSD1Q9H3U5 465 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 ZNF334Q9HCZ1 680 aaPredicted RBP13.85□□□□□ -0.19
HDAC1-209ENST00000484305 SLC2A4RGQ9NR83 387 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 ABI2Q9NYB9 513 aaPredicted RBP13.85□□□□□ -0.19
HDAC1-209ENST00000484305 CA14Q9ULX7 337 aa13.85□□□□□ -0.19
HDAC1-209ENST00000484305 DENND4CQ5VZ89 1909 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 NR3C1P04150 777 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 HAPLN1P10915 354 aaPredicted RBP13.84□□□□□ -0.19
HDAC1-209ENST00000484305 LHX1P48742 406 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 MYL7Q01449 175 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 SMARCB1Q12824 385 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 KCNB1Q14721 858 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 TEAD2Q15562 447 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 CCDC142Q17RM4 750 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 FAM78AQ5JUQ0 283 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 CWF19L1Q69YN2 538 aaKnown RBP13.84□□□□□ -0.19
HDAC1-209ENST00000484305 ASTLQ6HA08 431 aaPredicted RBP13.84□□□□□ -0.19
HDAC1-209ENST00000484305 TANGO2Q6ICL3 276 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 DPH6Q7L8W6 267 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 TMEM105Q8N8V8 129 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 FLCNQ8NFG4 579 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 SPATA18Q8TC71 538 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 SPPL2BQ8TCT7 592 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 PARD3BQ8TEW8 1205 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 C2orf15Q8WU43 125 aaKnown RBP13.84□□□□□ -0.19
HDAC1-209ENST00000484305 KBTBD7Q8WVZ9 684 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 PSMG2Q969U7 264 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 PKMYT1Q99640 499 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 PI4K2AQ9BTU6 479 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 KCNH6Q9H252 994 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 GTF3C4Q9UKN8 822 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 TRAF3IP3Q9Y228 551 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 ASB3Q9Y575 518 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 PCDHB5Q9Y5E4 795 aa13.84□□□□□ -0.19
HDAC1-209ENST00000484305 COL4A3Q01955 1670 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 A0A1W2PRU2 124 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 LRRIQ3A6PVS8 624 aaPredicted RBP13.83□□□□□ -0.2
HDAC1-209ENST00000484305 PI15O43692 258 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 ATP2C2O75185 946 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 ECI2O75521 394 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 KIF20AO95235 890 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 FCARP24071 287 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 LMO2P25791 158 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 PLA2G5P39877 138 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 MYL6P60660 151 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 DLG4P78352 724 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 CLDN10P78369 228 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 INTS6LQ5JSJ4 861 aaKnown RBP13.83□□□□□ -0.2
HDAC1-209ENST00000484305 GAREM2Q75VX8 874 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 ITIH5Q86UX2 942 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 SMYD4Q8IYR2 804 aaPredicted RBP13.83□□□□□ -0.2
HDAC1-209ENST00000484305 GUF1Q8N442 669 aaKnown RBP13.83□□□□□ -0.2
HDAC1-209ENST00000484305 PRSS33Q8NF86 280 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 FAM200AQ8TCP9 573 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 GIPC2Q8TF65 315 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 FAM122AQ96E09 287 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 ASB16Q96NS5 453 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 MMS19Q96T76 1030 aa13.83□□□□□ -0.2
HDAC1-209ENST00000484305 OBSL1O75147 1896 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 PTPRDP23468 1912 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 MYBPHLA2RUH7 354 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 CALUO43852 315 aaPredicted RBP13.82□□□□□ -0.2
HDAC1-209ENST00000484305 PHACTR2O75167 634 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 C4BPAP04003 597 aaKnown RBP13.82□□□□□ -0.2
HDAC1-209ENST00000484305 WARSP23381 471 aaKnown RBP13.82□□□□□ -0.2
HDAC1-209ENST00000484305 CYP2F1P24903 491 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 PCSK1P29120 753 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 GPR15P49685 360 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 CLCN5P51795 746 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 FAM160A1Q05DH4 1040 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 TRPC3Q13507 836 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 NFE2Q16621 373 aaPredicted RBP13.82□□□□□ -0.2
HDAC1-209ENST00000484305 WDR72Q3MJ13 1102 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 STXBP5Q5T5C0 1151 aa13.82□□□□□ -0.2
HDAC1-209ENST00000484305 TDRD10Q5VZ19 366 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms