RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 VNN2O95498 520 aa28.56■■■□□ 2.16
SMDT1-203ENST00000484235 TSPY1Q01534 308 aa28.56■■■□□ 2.16
SMDT1-203ENST00000484235 ZNF699Q32M78 642 aa28.56■■■□□ 2.16
SMDT1-203ENST00000484235 SLC39A12Q504Y0 691 aa28.56■■■□□ 2.16
SMDT1-203ENST00000484235 METTL14Q9HCE5 456 aaKnown RBP28.56■■■□□ 2.16
SMDT1-203ENST00000484235 TMEM8AQ9HCN3 771 aa28.56■■■□□ 2.16
SMDT1-203ENST00000484235 HSFX1Q9UBD0 423 aa28.56■■■□□ 2.16
SMDT1-203ENST00000484235 NXF1Q9UBU9 619 aaKnown RBP28.56■■■□□ 2.16
SMDT1-203ENST00000484235 INSL5Q9Y5Q6 135 aa28.56■■■□□ 2.16
SMDT1-203ENST00000484235 TACC1O75410 805 aa28.55■■■□□ 2.16
SMDT1-203ENST00000484235 MBD3O95983 291 aa28.55■■■□□ 2.16
SMDT1-203ENST00000484235 LRG1P02750 347 aa28.55■■■□□ 2.16
SMDT1-203ENST00000484235 WARSP23381 471 aaKnown RBP28.55■■■□□ 2.16
SMDT1-203ENST00000484235 PCSK1P29120 753 aa28.55■■■□□ 2.16
SMDT1-203ENST00000484235 STX17P56962 302 aa28.55■■■□□ 2.16
SMDT1-203ENST00000484235 DUSP4Q13115 394 aa28.55■■■□□ 2.16
SMDT1-203ENST00000484235 ZNF667Q5HYK9 610 aa28.55■■■□□ 2.16
SMDT1-203ENST00000484235 FRMD5Q7Z6J6 570 aa28.55■■■□□ 2.16
SMDT1-203ENST00000484235 LRRTM3Q86VH5 581 aa28.55■■■□□ 2.16
SMDT1-203ENST00000484235 OSTM1Q86WC4 334 aa28.55■■■□□ 2.16
SMDT1-203ENST00000484235 ATAD1Q8NBU5 361 aa28.55■■■□□ 2.16
SMDT1-203ENST00000484235 C2orf15Q8WU43 125 aaKnown RBP28.55■■■□□ 2.16
SMDT1-203ENST00000484235 KBTBD7Q8WVZ9 684 aa28.55■■■□□ 2.16
SMDT1-203ENST00000484235 RWDD2AQ9UIY3 292 aa28.55■■■□□ 2.16
SMDT1-203ENST00000484235 POLIQ9UNA4 740 aa28.55■■■□□ 2.16
SMDT1-203ENST00000484235 USTQ9Y2C2 406 aa28.55■■■□□ 2.16
SMDT1-203ENST00000484235 MTMR11A4FU01 709 aa28.54■■■□□ 2.16
SMDT1-203ENST00000484235 HLA-DRAP01903 254 aa28.54■■■□□ 2.16
SMDT1-203ENST00000484235 KRT39Q6A163 491 aa28.54■■■□□ 2.16
SMDT1-203ENST00000484235 GRASPQ7Z6J2 395 aaPredicted RBP28.54■■■□□ 2.16
SMDT1-203ENST00000484235 CLUHO75153 1309 aa28.53■■■□□ 2.16
SMDT1-203ENST00000484235 ASS1P00966 412 aaKnown RBP28.53■■■□□ 2.16
SMDT1-203ENST00000484235 P4HA1P13674 534 aa28.53■■■□□ 2.16
SMDT1-203ENST00000484235 GNL1P36915 607 aaPredicted RBP28.53■■■□□ 2.16
SMDT1-203ENST00000484235 PIK3CAP42336 1068 aa28.53■■■□□ 2.16
SMDT1-203ENST00000484235 NFE2Q16621 373 aaPredicted RBP28.53■■■□□ 2.16
SMDT1-203ENST00000484235 TAS1R2Q8TE23 839 aa28.53■■■□□ 2.16
SMDT1-203ENST00000484235 SNX25Q9H3E2 840 aa28.53■■■□□ 2.16
SMDT1-203ENST00000484235 MMRN2Q9H8L6 949 aa28.53■■■□□ 2.16
SMDT1-203ENST00000484235 SLC27A5Q9Y2P5 690 aa28.53■■■□□ 2.16
SMDT1-203ENST00000484235 CLSTN1O94985 981 aa28.52■■■□□ 2.16
SMDT1-203ENST00000484235 FGFR1OPO95684 399 aaKnown RBP28.52■■■□□ 2.16
SMDT1-203ENST00000484235 GNA14O95837 355 aa28.52■■■□□ 2.16
SMDT1-203ENST00000484235 ACAT1P24752 427 aaKnown RBP28.52■■■□□ 2.16
SMDT1-203ENST00000484235 LMO2P25791 158 aa28.52■■■□□ 2.16
SMDT1-203ENST00000484235 TUFMP49411 452 aaKnown RBP28.52■■■□□ 2.16
SMDT1-203ENST00000484235 INTS6LQ5JSJ4 861 aaKnown RBP28.52■■■□□ 2.16
SMDT1-203ENST00000484235 TCERG1LQ5VWI1 586 aa28.52■■■□□ 2.16
SMDT1-203ENST00000484235 OTOP3Q7RTS5 596 aa28.52■■■□□ 2.16
SMDT1-203ENST00000484235 MRPL45Q9BRJ2 306 aaKnown RBP28.52■■■□□ 2.16
SMDT1-203ENST00000484235 SRRTQ9BXP5 876 aaKnown RBP28.52■■■□□ 2.16
SMDT1-203ENST00000484235 IMPG2Q9BZV3 1241 aa28.52■■■□□ 2.16
SMDT1-203ENST00000484235 CRISPLD1Q9H336 500 aa28.52■■■□□ 2.16
SMDT1-203ENST00000484235 TSC2P49815 1807 aa28.51■■■□□ 2.15
SMDT1-203ENST00000484235 PTPN2P17706 415 aa28.51■■■□□ 2.15
SMDT1-203ENST00000484235 ALDH1A3P47895 512 aa28.51■■■□□ 2.15
SMDT1-203ENST00000484235 NLRP12P59046 1061 aa28.51■■■□□ 2.15
SMDT1-203ENST00000484235 TWF1Q12792 350 aa28.51■■■□□ 2.15
SMDT1-203ENST00000484235 PLD1Q13393 1074 aa28.51■■■□□ 2.15
SMDT1-203ENST00000484235 CCDC40Q4G0X9 1142 aa28.51■■■□□ 2.15
SMDT1-203ENST00000484235 DCAF17Q5H9S7 520 aaPredicted RBP28.51■■■□□ 2.15
SMDT1-203ENST00000484235 ELMOD1Q8N336 334 aa28.51■■■□□ 2.15
SMDT1-203ENST00000484235 SPPL2BQ8TCT7 592 aa28.51■■■□□ 2.15
SMDT1-203ENST00000484235 ACSF2Q96CM8 615 aaPredicted RBP28.51■■■□□ 2.15
SMDT1-203ENST00000484235 DNMT3BQ9UBC3 853 aaKnown RBP28.51■■■□□ 2.15
SMDT1-203ENST00000484235 CDH9Q9ULB4 789 aa28.51■■■□□ 2.15
SMDT1-203ENST00000484235 PCDHB5Q9Y5E4 795 aa28.51■■■□□ 2.15
SMDT1-203ENST00000484235 SP100P23497 879 aaPredicted RBP28.5■■■□□ 2.15
SMDT1-203ENST00000484235 MXI1P50539 228 aa28.5■■■□□ 2.15
SMDT1-203ENST00000484235 RBM43Q6ZSC3 357 aaKnown RBP28.5■■■□□ 2.15
SMDT1-203ENST00000484235 PLCD3Q8N3E9 789 aa28.5■■■□□ 2.15
SMDT1-203ENST00000484235 CCDC150Q8NCX0 1101 aa28.5■■■□□ 2.15
SMDT1-203ENST00000484235 FBXL13Q8NEE6 735 aa28.5■■■□□ 2.15
SMDT1-203ENST00000484235 OR6B3Q8NGW1 331 aa28.5■■■□□ 2.15
SMDT1-203ENST00000484235 SLC35C1Q96A29 364 aa28.5■■■□□ 2.15
SMDT1-203ENST00000484235 ZNF512Q96ME7 567 aaPredicted RBP28.5■■■□□ 2.15
SMDT1-203ENST00000484235 PKMYT1Q99640 499 aa28.5■■■□□ 2.15
SMDT1-203ENST00000484235 TMLHEQ9NVH6 421 aa28.5■■■□□ 2.15
SMDT1-203ENST00000484235 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.5■■■□□ 2.15
SMDT1-203ENST00000484235 GTF3C4Q9UKN8 822 aa28.5■■■□□ 2.15
SMDT1-203ENST00000484235 YIPF1Q9Y548 306 aa28.5■■■□□ 2.15
SMDT1-203ENST00000484235 TRIOO75962 3097 aa28.49■■■□□ 2.15
SMDT1-203ENST00000484235 C2CD4DB7Z1M9 353 aa28.49■■■□□ 2.15
SMDT1-203ENST00000484235 PDGFRBP09619 1106 aa28.49■■■□□ 2.15
SMDT1-203ENST00000484235 FSHRP23945 695 aa28.49■■■□□ 2.15
SMDT1-203ENST00000484235 EPHB3P54753 998 aa28.49■■■□□ 2.15
SMDT1-203ENST00000484235 IQCEQ6IPM2 695 aa28.49■■■□□ 2.15
SMDT1-203ENST00000484235 FAM171BQ6P995 826 aa28.49■■■□□ 2.15
SMDT1-203ENST00000484235 ZDHHC14Q8IZN3 488 aa28.49■■■□□ 2.15
SMDT1-203ENST00000484235 TDRD5Q8NAT2 981 aaKnown RBP28.49■■■□□ 2.15
SMDT1-203ENST00000484235 ELMO3Q96BJ8 720 aa28.49■■■□□ 2.15
SMDT1-203ENST00000484235 SYT15Q9BQS2 421 aa28.49■■■□□ 2.15
SMDT1-203ENST00000484235 HCFC1R1Q9NWW0 138 aa28.49■■■□□ 2.15
SMDT1-203ENST00000484235 DACH1Q9UI36 760 aa28.49■■■□□ 2.15
SMDT1-203ENST00000484235 HCRTO43612 131 aa28.48■■■□□ 2.15
SMDT1-203ENST00000484235 CDH8P55286 799 aa28.48■■■□□ 2.15
SMDT1-203ENST00000484235 NTHL1P78549 312 aa28.48■■■□□ 2.15
SMDT1-203ENST00000484235 MAPRE1Q15691 268 aaKnown RBP28.48■■■□□ 2.15
SMDT1-203ENST00000484235 DPCR1Q3MIW9 517 aa28.48■■■□□ 2.15
SMDT1-203ENST00000484235 PABPC1LQ4VXU2 614 aaKnown RBP28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms