RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 TMEM150AQ86TG1 271 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 ITIH5Q86UX2 942 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 GIPC2Q8TF65 315 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 USP13Q92995 863 aaPredicted RBP11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 SEPT5Q99719 369 aaPredicted RBP11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 RUSC1Q9BVN2 902 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 DDX19AQ9NUU7 478 aaKnown RBP11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 EBF1Q9UH73 591 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 KLK13Q9UKR3 277 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 OBSL1O75147 1896 aa11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 ASCC3Q8N3C0 2202 aaKnown RBP11.82□□□□□ -0.52
SMARCC1-205ENST00000483847 THADAQ6YHU6 1953 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 LOC400499M0QZD8 3231 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 TTC26A0AVF1 554 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 ANTXRLA6NF34 631 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 E9PMD0 336 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 KHNYNO15037 678 aaKnown RBP11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 JAK2O60674 1132 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 TOM1L1O75674 476 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 TYMPP19971 482 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 DRD1P21728 446 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 BCKDHBP21953 392 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 MUTP22033 750 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 CDC25CP30307 473 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 GJA4P35212 333 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 TNFSF9P41273 254 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 DGKEP52429 567 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 DMP1Q13316 513 aaPredicted RBP11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 KARSQ15046 597 aaKnown RBP11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 SLC39A12Q504Y0 691 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 PMS2CLQ68D20 193 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 MAB21L3Q8N8X9 362 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 NSUN7Q8NE18 718 aaKnown RBP11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 KIF12Q96FN5 646 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 P2RY13Q9BPV8 354 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 TPSD1Q9BZJ3 242 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 TBX20Q9UMR3 447 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 CACNA1EQ15878 2313 aa11.81□□□□□ -0.52
SMARCC1-205ENST00000483847 ZNF638Q14966 1978 aaKnown RBP11.8□□□□□ -0.52
SMARCC1-205ENST00000483847 LACTBL1A8MY62 500 aa11.8□□□□□ -0.52
SMARCC1-205ENST00000483847 TAF4O00268 1085 aa11.8□□□□□ -0.52
SMARCC1-205ENST00000483847 GUCY1B3Q02153 619 aa11.8□□□□□ -0.52
SMARCC1-205ENST00000483847 VEPH1Q14D04 833 aa11.8□□□□□ -0.52
SMARCC1-205ENST00000483847 ME3Q16798 604 aa11.8□□□□□ -0.52
SMARCC1-205ENST00000483847 MGAT5BQ3V5L5 792 aa11.8□□□□□ -0.52
SMARCC1-205ENST00000483847 HAUS3Q68CZ6 603 aa11.8□□□□□ -0.52
SMARCC1-205ENST00000483847 TXNDC8Q6A555 127 aa11.8□□□□□ -0.52
SMARCC1-205ENST00000483847 ARMCX5Q6P1M9 558 aa11.8□□□□□ -0.52
SMARCC1-205ENST00000483847 CYP2U1Q7Z449 544 aa11.8□□□□□ -0.52
SMARCC1-205ENST00000483847 STKLD1Q8NE28 680 aa11.8□□□□□ -0.52
SMARCC1-205ENST00000483847 SENP8Q96LD8 212 aa11.8□□□□□ -0.52
SMARCC1-205ENST00000483847 GCNAQ96QF7 691 aa11.8□□□□□ -0.52
SMARCC1-205ENST00000483847 HSFX1Q9UBD0 423 aa11.8□□□□□ -0.52
SMARCC1-205ENST00000483847 UBQLN1Q9UMX0 589 aaKnown RBP11.8□□□□□ -0.52
SMARCC1-205ENST00000483847 RBM19Q9Y4C8 960 aaKnown RBP11.8□□□□□ -0.52
SMARCC1-205ENST00000483847 NEUROG3Q9Y4Z2 214 aa11.8□□□□□ -0.52
SMARCC1-205ENST00000483847 SMG1Q96Q15 3661 aaKnown RBP11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 SPAARA0A1B0GVQ0 90 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 PP2D1A8MPX8 630 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 CLDN3O15551 220 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 EPB41L2O43491 1005 aaKnown RBP11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 F11P03951 625 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 CLTAP09496 248 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 ODC1P11926 461 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 HMGA1P17096 107 aaKnown RBP11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 CYP3A5P20815 502 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 AVPR1AP37288 418 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 TUFMP49411 452 aaKnown RBP11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 NLRP12P59046 1061 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 LILRA4P59901 499 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 MCL1Q07820 350 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 RAD51AP2Q09MP3 1159 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 BFSP1Q12934 665 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 STRN3Q13033 797 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 PSMD2Q13200 908 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 FBXO43Q4G163 708 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 KCNK18Q7Z418 384 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 LRRTM3Q86VH5 581 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 C4orf32Q8N8J7 132 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 TMEM161BQ8NDZ6 487 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 TSTD1Q8NFU3 115 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 GTF3C6Q969F1 213 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 DRC1Q96MC2 740 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 ZCWPW1Q9H0M4 648 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 PLEKHA5Q9HAU0 1116 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 TDP1Q9NUW8 608 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 LRWD1Q9UFC0 647 aa11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 TNRC6BQ9UPQ9 1833 aaKnown RBP11.79□□□□□ -0.52
SMARCC1-205ENST00000483847 PTPRDP23468 1912 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 MAPTP10636 758 aaKnown RBP11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 MATR3P43243 847 aaKnown RBP eCLIP11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 MAPK8P45983 427 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 DHPSP49366 369 aaPredicted RBP11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 FXR2P51116 673 aaKnown RBP eCLIP11.78□□□□□ -0.521e-6■□□□□ 10.3
SMARCC1-205ENST00000483847 AMPD2Q01433 879 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 PPP2R3AQ06190 1150 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 TRIM29Q14134 588 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 NBR1Q14596 966 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 PDGFRLQ15198 375 aa11.78□□□□□ -0.52
SMARCC1-205ENST00000483847 ENOX2Q16206 610 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms