RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 PHF13Q86YI8 300 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-226ENST00000483656 COLGALT2Q8IYK4 626 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 MCOLN2Q8IZK6 566 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 CRYBG2Q8N1P7 616 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 LRRC57Q8N9N7 239 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 APPL2Q8NEU8 664 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 OR6B3Q8NGW1 331 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 TPCN2Q8NHX9 752 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 SLC35G2Q8TBE7 412 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 CTNNBL1Q8WYA6 563 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-226ENST00000483656 RFFLQ8WZ73 363 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 DDX27Q96GQ7 796 aaKnown RBP10.74□□□□□ -0.69
HDAC6-226ENST00000483656 HEXIM2Q96MH2 286 aaKnown RBP10.74□□□□□ -0.69
HDAC6-226ENST00000483656 UROC1Q96N76 676 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 NOX5Q96PH1 765 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 NT5C1AQ9BXI3 368 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 LHX5Q9H2C1 402 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 PDCL3Q9H2J4 239 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 DPEP3Q9H4B8 488 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 OSGEPQ9NPF4 335 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 TBC1D13Q9NVG8 400 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 CHORDC1Q9UHD1 332 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-226ENST00000483656 CYTH4Q9UIA0 394 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 KIAA1257Q9ULG3 409 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.74□□□□□ -0.69
HDAC6-226ENST00000483656 PCDHGC5Q9Y5F6 944 aa10.74□□□□□ -0.69
HDAC6-226ENST00000483656 A8MXQ7 604 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 ATMINO43313 823 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-226ENST00000483656 HUS1O60921 280 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 PALMO75781 387 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 MTA2O94776 668 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 MICAL2O94851 1124 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 LSM8O95777 96 aaKnown RBP10.73□□□□□ -0.69
HDAC6-226ENST00000483656 ATP1A1P05023 1023 aaKnown RBP10.73□□□□□ -0.69
HDAC6-226ENST00000483656 ITGB1P05556 798 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 PFKMP08237 780 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 PDGFRBP09619 1106 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 RFC2P35250 354 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 BRCC3P46736 316 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 HADHBP55084 474 aaKnown RBP10.73□□□□□ -0.69
HDAC6-226ENST00000483656 AMPD2Q01433 879 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 C2CD6Q53TS8 623 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 SGO2Q562F6 1265 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 KIAA0319Q5VV43 1072 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 ARHGAP17Q68EM7 881 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 LLGL2Q6P1M3 1020 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 CNKSR3Q6P9H4 555 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 DCLRE1AQ6PJP8 1040 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 LCLAT1Q6UWP7 414 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 SLFN11Q7Z7L1 901 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 ADGRF2Q8IZF7 708 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 C12orf29Q8N999 325 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 C1orf131Q8NDD1 294 aaKnown RBP10.73□□□□□ -0.69
HDAC6-226ENST00000483656 TRIM58Q8NG06 486 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 URGCPQ8TCY9 931 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 NAPGQ99747 312 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-226ENST00000483656 SNX25Q9H3E2 840 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 DNAJB4Q9UDY4 337 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 GTF3C4Q9UKN8 822 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 STXBP5LQ9Y2K9 1186 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 PCDHB7Q9Y5E2 793 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 TTC3P53804 2025 aa10.73□□□□□ -0.69
HDAC6-226ENST00000483656 TDRD15B5MCY1 1934 aaKnown RBP10.72□□□□□ -0.69
HDAC6-226ENST00000483656 TCRBV5S1A1TA0A578 114 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 I3L4J1 428 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 M0QZQ0 153 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 DLL1O00548 723 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 ENC1O14682 589 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 MED7O43513 233 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 NCK2O43639 380 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 B3GAT3O94766 335 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 KIF4AO95239 1232 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 MMP8P22894 467 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 RRM1P23921 792 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 GPD2P43304 727 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 NOP2P46087 812 aaKnown RBP10.72□□□□□ -0.69
HDAC6-226ENST00000483656 NSFP46459 744 aaKnown RBP10.72□□□□□ -0.69
HDAC6-226ENST00000483656 C1QBPQ07021 282 aaKnown RBP10.72□□□□□ -0.69
HDAC6-226ENST00000483656 CCDC142Q17RM4 750 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 PAN2Q504Q3 1202 aaKnown RBP10.72□□□□□ -0.69
HDAC6-226ENST00000483656 PKDCCQ504Y2 493 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 PPP1R26Q5T8A7 1209 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-226ENST00000483656 PAPD7Q5XG87 772 aaKnown RBP10.72□□□□□ -0.69
HDAC6-226ENST00000483656 DSTYKQ6XUX3 929 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 MMS22LQ6ZRQ5 1243 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 PHLDB2Q86SQ0 1253 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 NPAS4Q8IUM7 802 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 TMEM35BQ8NCS4 154 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 UBA3Q8TBC4 463 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 RSPH1Q8WYR4 309 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 ZNF653Q96CK0 615 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 RTP3Q9BQQ7 232 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 C11orf70Q9BRQ4 267 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 ZNF518BQ9C0D4 1074 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 GOLPH3Q9H4A6 298 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 NRDE2Q9H7Z3 1164 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 L2HGDHQ9H9P8 463 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 ABCB6Q9NP58 842 aa10.72□□□□□ -0.69
HDAC6-226ENST00000483656 AVENQ9NQS1 362 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-226ENST00000483656 ADAM22Q9P0K1 906 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms