RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 INTS6LQ5JSJ4 861 aaKnown RBP19.3■□□□□ 0.68
HDAC6-225ENST00000483506 SPPL2BQ8TCT7 592 aa19.3■□□□□ 0.68
HDAC6-225ENST00000483506 MYADMQ96S97 322 aa19.3■□□□□ 0.68
HDAC6-225ENST00000483506 EPHX3Q9H6B9 360 aa19.3■□□□□ 0.68
HDAC6-225ENST00000483506 LMBRD1Q9NUN5 540 aa19.3■□□□□ 0.68
HDAC6-225ENST00000483506 HCFC1R1Q9NWW0 138 aa19.3■□□□□ 0.68
HDAC6-225ENST00000483506 CEP72Q9P209 647 aa19.3■□□□□ 0.68
HDAC6-225ENST00000483506 POLIQ9UNA4 740 aa19.3■□□□□ 0.68
HDAC6-225ENST00000483506 MYO10Q9HD67 2058 aa19.29■□□□□ 0.68
HDAC6-225ENST00000483506 TRIM49BA6NDI0 452 aa19.29■□□□□ 0.68
HDAC6-225ENST00000483506 MICAL2O94851 1124 aa19.29■□□□□ 0.68
HDAC6-225ENST00000483506 RHOP08100 348 aa19.29■□□□□ 0.68
HDAC6-225ENST00000483506 EPB41P11171 864 aaKnown RBP19.29■□□□□ 0.68
HDAC6-225ENST00000483506 PTPN2P17706 415 aa19.29■□□□□ 0.68
HDAC6-225ENST00000483506 GTF2H1P32780 548 aa19.29■□□□□ 0.68
HDAC6-225ENST00000483506 NTHL1P78549 312 aa19.29■□□□□ 0.68
HDAC6-225ENST00000483506 PPP3CAQ08209 521 aa19.29■□□□□ 0.68
HDAC6-225ENST00000483506 NFE2Q16621 373 aaPredicted RBP19.29■□□□□ 0.68
HDAC6-225ENST00000483506 PRSS36Q5K4E3 855 aa19.29■□□□□ 0.68
HDAC6-225ENST00000483506 ISM2Q6H9L7 571 aa19.29■□□□□ 0.68
HDAC6-225ENST00000483506 TTC9BQ8N6N2 239 aa19.29■□□□□ 0.68
HDAC6-225ENST00000483506 TAF4BQ92750 862 aa19.29■□□□□ 0.68
HDAC6-225ENST00000483506 GBP4Q96PP9 640 aa19.29■□□□□ 0.68
HDAC6-225ENST00000483506 DNAJC25Q9H1X3 360 aa19.29■□□□□ 0.68
HDAC6-225ENST00000483506 CLSTN2Q9H4D0 955 aa19.29■□□□□ 0.68
HDAC6-225ENST00000483506 ABCB6Q9NP58 842 aa19.29■□□□□ 0.68
HDAC6-225ENST00000483506 TRIM49P0CI25 452 aa19.28■□□□□ 0.68
HDAC6-225ENST00000483506 TRIM49CP0CI26 452 aa19.28■□□□□ 0.68
HDAC6-225ENST00000483506 LAMP2P13473 410 aa19.28■□□□□ 0.68
HDAC6-225ENST00000483506 TUFMP49411 452 aaKnown RBP19.28■□□□□ 0.68
HDAC6-225ENST00000483506 TNNC1P63316 161 aa19.28■□□□□ 0.68
HDAC6-225ENST00000483506 CAMK4Q16566 473 aa19.28■□□□□ 0.68
HDAC6-225ENST00000483506 SGSM1Q2NKQ1 1148 aa19.28■□□□□ 0.68
HDAC6-225ENST00000483506 ZNF699Q32M78 642 aa19.28■□□□□ 0.68
HDAC6-225ENST00000483506 TTI2Q6NXR4 508 aa19.28■□□□□ 0.68
HDAC6-225ENST00000483506 FAM171BQ6P995 826 aa19.28■□□□□ 0.68
HDAC6-225ENST00000483506 GET4Q7L5D6 327 aaPredicted RBP19.28■□□□□ 0.68
HDAC6-225ENST00000483506 ELMOD1Q8N336 334 aa19.28■□□□□ 0.68
HDAC6-225ENST00000483506 LEMD2Q8NC56 503 aa19.28■□□□□ 0.68
HDAC6-225ENST00000483506 MMS19Q96T76 1030 aa19.28■□□□□ 0.68
HDAC6-225ENST00000483506 C1QTNF1Q9BXJ1 281 aa19.28■□□□□ 0.68
HDAC6-225ENST00000483506 TMEM8AQ9HCN3 771 aa19.28■□□□□ 0.68
HDAC6-225ENST00000483506 TMLHEQ9NVH6 421 aa19.28■□□□□ 0.68
HDAC6-225ENST00000483506 LIMD1Q9UGP4 676 aa19.28■□□□□ 0.68
HDAC6-225ENST00000483506 CDH9Q9ULB4 789 aa19.28■□□□□ 0.68
HDAC6-225ENST00000483506 ASB3Q9Y575 518 aa19.28■□□□□ 0.68
HDAC6-225ENST00000483506 BIN1O00499 593 aa19.27■□□□□ 0.68
HDAC6-225ENST00000483506 ASS1P00966 412 aaKnown RBP19.27■□□□□ 0.68
HDAC6-225ENST00000483506 HAPLN1P10915 354 aaPredicted RBP19.27■□□□□ 0.68
HDAC6-225ENST00000483506 GBP2P32456 591 aaPredicted RBP19.27■□□□□ 0.68
HDAC6-225ENST00000483506 ALDH1A3P47895 512 aa19.27■□□□□ 0.68
HDAC6-225ENST00000483506 SLC5A9Q2M3M2 681 aa19.27■□□□□ 0.68
HDAC6-225ENST00000483506 ZNF667Q5HYK9 610 aa19.27■□□□□ 0.68
HDAC6-225ENST00000483506 IQCEQ6IPM2 695 aa19.27■□□□□ 0.68
HDAC6-225ENST00000483506 ITFG1Q8TB96 612 aa19.27■□□□□ 0.68
HDAC6-225ENST00000483506 EDAQ92838 391 aa19.27■□□□□ 0.68
HDAC6-225ENST00000483506 NXPE3Q969Y0 559 aa19.27■□□□□ 0.68
HDAC6-225ENST00000483506 EEF2KMTQ96G04 330 aa19.27■□□□□ 0.68
HDAC6-225ENST00000483506 ZNF512Q96ME7 567 aaPredicted RBP19.27■□□□□ 0.68
HDAC6-225ENST00000483506 CEP63Q96MT8 703 aa19.27■□□□□ 0.68
HDAC6-225ENST00000483506 DUSP9Q99956 384 aaKnown RBP19.27■□□□□ 0.68
HDAC6-225ENST00000483506 MRPL45Q9BRJ2 306 aaKnown RBP19.27■□□□□ 0.68
HDAC6-225ENST00000483506 LRRC3Q9BY71 257 aa19.27■□□□□ 0.68
HDAC6-225ENST00000483506 IGSF9Q9P2J2 1179 aa19.27■□□□□ 0.68
HDAC6-225ENST00000483506 CDH7Q9ULB5 785 aa19.27■□□□□ 0.68
HDAC6-225ENST00000483506 SORCS3Q9UPU3 1222 aa19.27■□□□□ 0.68
HDAC6-225ENST00000483506 SLC27A5Q9Y2P5 690 aa19.27■□□□□ 0.68
HDAC6-225ENST00000483506 PCDHB5Q9Y5E4 795 aa19.27■□□□□ 0.68
HDAC6-225ENST00000483506 TECTAO75443 2155 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 PTPRDP23468 1912 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 BICDL2A1A5D9 508 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 ANHXE9PGG2 379 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 HCRTO43612 131 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 HLA-DRAP01903 254 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 ACAT1P24752 427 aaKnown RBP19.26■□□□□ 0.67
HDAC6-225ENST00000483506 LMO2P25791 158 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 GCLMP48507 274 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 EPHB3P54753 998 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 ZXDAP98168 799 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 CFAP221Q4G0U5 840 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 NPAS3Q8IXF0 933 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 NELFBQ8WX92 580 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 FGF13Q92913 245 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 PSMG2Q969U7 264 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 FUBP3Q96I24 572 aaKnown RBP eCLIP19.26■□□□□ 0.67
HDAC6-225ENST00000483506 SYT15Q9BQS2 421 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 CORO1BQ9BR76 489 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 C11orf16Q9NQ32 467 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 MRPS23Q9Y3D9 190 aaKnown RBP19.26■□□□□ 0.67
HDAC6-225ENST00000483506 NME7Q9Y5B8 376 aa19.26■□□□□ 0.67
HDAC6-225ENST00000483506 ZNF197O14709 1029 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 STX10O60499 249 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 GPR37L1O60883 481 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 ASGR2P07307 311 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 ATF6P18850 670 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 GNL1P36915 607 aaPredicted RBP19.25■□□□□ 0.67
HDAC6-225ENST00000483506 PIK3CAP42336 1068 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 PAK1Q13153 545 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 KRT39Q6A163 491 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 KLHL10Q6JEL2 608 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms