RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 UBE2TQ9NPD8 197 aaPredicted RBP19.06■□□□□ 0.64
CPNE1-224ENST00000483359 RTN4Q9NQC3 1192 aaKnown RBP19.06■□□□□ 0.64
CPNE1-224ENST00000483359 IFNKQ9P0W0 207 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 FNIP2Q9P278 1114 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 APEX2Q9UBZ4 518 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 PLXNA3P51805 1871 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 A0A1B0GTH6 734 aa19.05■□□□□ 0.64
CPNE1-224ENST00000483359 WDR27A2RRH5 827 aa19.05■□□□□ 0.64
CPNE1-224ENST00000483359 TBC1D4O60343 1298 aa19.05■□□□□ 0.64
CPNE1-224ENST00000483359 CLASP2O75122 1294 aaKnown RBP19.05■□□□□ 0.64
CPNE1-224ENST00000483359 POU3F3P20264 500 aaPredicted RBP19.05■□□□□ 0.64
CPNE1-224ENST00000483359 NDST1P52848 882 aa19.05■□□□□ 0.64
CPNE1-224ENST00000483359 UBASH3AP57075 661 aa19.05■□□□□ 0.64
CPNE1-224ENST00000483359 HYAL1Q12794 435 aa19.05■□□□□ 0.64
CPNE1-224ENST00000483359 SIX2Q9NPC8 291 aa19.05■□□□□ 0.64
CPNE1-224ENST00000483359 CISHQ9NSE2 258 aa19.05■□□□□ 0.64
CPNE1-224ENST00000483359 FAM207AQ9NSI2 230 aaPredicted RBP19.05■□□□□ 0.64
CPNE1-224ENST00000483359 STXBP5LQ9Y2K9 1186 aa19.05■□□□□ 0.64
CPNE1-224ENST00000483359 PRUNE2Q8WUY3 3088 aa19.05■□□□□ 0.64
CPNE1-224ENST00000483359 ATP2C2O75185 946 aa19.04■□□□□ 0.64
CPNE1-224ENST00000483359 TBXAS1P24557 533 aaPredicted RBP19.04■□□□□ 0.64
CPNE1-224ENST00000483359 DUSP6Q16828 381 aa19.04■□□□□ 0.64
CPNE1-224ENST00000483359 SLC39A12Q504Y0 691 aa19.04■□□□□ 0.64
CPNE1-224ENST00000483359 SLC8B1Q6J4K2 584 aa19.04■□□□□ 0.64
CPNE1-224ENST00000483359 EP400NLQ6ZTU2 488 aa19.04■□□□□ 0.64
CPNE1-224ENST00000483359 GPR65Q8IYL9 337 aa19.04■□□□□ 0.64
CPNE1-224ENST00000483359 TWNKQ96RR1 684 aa19.04■□□□□ 0.64
CPNE1-224ENST00000483359 LPIN3Q9BQK8 851 aa19.04■□□□□ 0.64
CPNE1-224ENST00000483359 SYT15Q9BQS2 421 aa19.04■□□□□ 0.64
CPNE1-224ENST00000483359 AJAP1Q9UKB5 411 aaPredicted RBP19.04■□□□□ 0.64
CPNE1-224ENST00000483359 HCFC2Q9Y5Z7 792 aa19.04■□□□□ 0.64
CPNE1-224ENST00000483359 OR6C75A6NL08 312 aa19.04■□□□□ 0.64
CPNE1-224ENST00000483359 LINC01565O15544 149 aa19.04■□□□□ 0.64
CPNE1-224ENST00000483359 TGM5O43548 720 aa19.04■□□□□ 0.64
CPNE1-224ENST00000483359 EPCAMP16422 314 aa19.04■□□□□ 0.64
CPNE1-224ENST00000483359 TSPY1Q01534 308 aa19.04■□□□□ 0.64
CPNE1-224ENST00000483359 ARHGAP44Q17R89 818 aa19.04■□□□□ 0.64
CPNE1-224ENST00000483359 KREMEN1Q96MU8 473 aa19.04■□□□□ 0.64
CPNE1-224ENST00000483359 CYP3A43Q9HB55 503 aa19.04■□□□□ 0.64
CPNE1-224ENST00000483359 GLUD1P00367 558 aa19.03■□□□□ 0.64
CPNE1-224ENST00000483359 PCSK1P29120 753 aa19.03■□□□□ 0.64
CPNE1-224ENST00000483359 CLCN4P51793 760 aa19.03■□□□□ 0.64
CPNE1-224ENST00000483359 GCNT1Q02742 428 aa19.03■□□□□ 0.64
CPNE1-224ENST00000483359 INTS6LQ5JSJ4 861 aaKnown RBP19.03■□□□□ 0.64
CPNE1-224ENST00000483359 RNF19BQ6ZMZ0 732 aa19.03■□□□□ 0.64
CPNE1-224ENST00000483359 LRRTM3Q86VH5 581 aa19.03■□□□□ 0.64
CPNE1-224ENST00000483359 ACBD6Q9BR61 282 aa19.03■□□□□ 0.64
CPNE1-224ENST00000483359 TMLHEQ9NVH6 421 aa19.03■□□□□ 0.64
CPNE1-224ENST00000483359 GTF3C4Q9UKN8 822 aa19.03■□□□□ 0.64
CPNE1-224ENST00000483359 BARX2Q9UMQ3 279 aaPredicted RBP19.03■□□□□ 0.64
CPNE1-224ENST00000483359 SIK3Q9Y2K2 1263 aa19.03■□□□□ 0.64
CPNE1-224ENST00000483359 SPTBN5Q9NRC6 3674 aaKnown RBP19.03■□□□□ 0.64
CPNE1-224ENST00000483359 COL6A3P12111 3177 aa19.03■□□□□ 0.64
CPNE1-224ENST00000483359 CILPO75339 1184 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 INCA1Q0VD86 236 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 RAPGEF1Q13905 1077 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 SKIV2LQ15477 1246 aaKnown RBP19.02■□□□□ 0.64
CPNE1-224ENST00000483359 ACOT1Q86TX2 421 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 VN1R2Q8NFZ6 395 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 SPATA18Q8TC71 538 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 XPO4Q9C0E2 1151 aaKnown RBP19.02■□□□□ 0.64
CPNE1-224ENST00000483359 ZCWPW1Q9H0M4 648 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 FHOD1Q9Y613 1164 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 MYBPHLA2RUH7 354 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 EPHB6O15197 1021 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 RAB33AQ14088 237 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 NR1I3Q14994 352 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 MDH1BQ5I0G3 518 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 KLHDC7AQ5VTJ3 777 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 IQCEQ6IPM2 695 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 DPY19L2P1Q6NXN4 242 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 TMEM270Q6UE05 265 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 WHAMMQ8TF30 809 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 CRTAC1Q9NQ79 661 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 DNAJC12Q9UKB3 198 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 CDH9Q9ULB4 789 aa19.02■□□□□ 0.64
CPNE1-224ENST00000483359 SPDYE4A6NLX3 237 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 PNMA6AP0CW24 399 aaPredicted RBP19.01■□□□□ 0.63
CPNE1-224ENST00000483359 ADCY1Q08828 1119 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 B3GALNT2Q8NCR0 500 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 FAXDC2Q96IV6 333 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 ERGIC2Q96RQ1 377 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 OXCT2Q9BYC2 517 aaPredicted RBP19.01■□□□□ 0.63
CPNE1-224ENST00000483359 ELOVL4Q9GZR5 314 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 MAN1C1Q9NR34 630 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 FAM49BQ9NUQ9 324 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 CLDND1Q9NY35 253 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 ABI2Q9NYB9 513 aaPredicted RBP19.01■□□□□ 0.63
CPNE1-224ENST00000483359 PCDHB4Q9Y5E5 795 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 KRT5P13647 590 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 UCHL3P15374 230 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 MFAP3P55082 362 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 GPR17Q13304 367 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 PPFIBP1Q86W92 1011 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 DCP1BQ8IZD4 617 aaKnown RBP19.01■□□□□ 0.63
CPNE1-224ENST00000483359 TTC9BQ8N6N2 239 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 C12orf29Q8N999 325 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 ATAD1Q8NBU5 361 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 ZNF461Q8TAF7 563 aa19.01■□□□□ 0.63
CPNE1-224ENST00000483359 CDCA3Q99618 268 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms