RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 WEE1P30291 646 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 CDC25CP30307 473 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 PRPHP41219 470 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 MCM2P49736 904 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 LIG4P49917 911 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 HMGN5P82970 282 aaKnown RBP8□□□□□ -1.13
CSDE1-206ENST00000483030 SHC2P98077 582 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 RUNX3Q13761 415 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 VEPH1Q14D04 833 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 TMEM196Q5HYL7 178 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 PLA2G2CQ5R387 149 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 SPATA1Q5VX52 437 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 C9orf57Q5W0N0 161 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 TRIM68Q6AZZ1 485 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 LRRTM3Q86VH5 581 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 CMTM8Q8IZV2 173 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 MAB21L3Q8N8X9 362 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 PNMA5Q96PV4 448 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 GCNAQ96QF7 691 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 FAM83CQ9BQN1 747 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 LSM14BQ9BX40 385 aaKnown RBP8□□□□□ -1.13
CSDE1-206ENST00000483030 ZCWPW1Q9H0M4 648 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 EBF3Q9H4W6 596 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 FBRSL1Q9HCM7 1045 aaKnown RBP8□□□□□ -1.13
CSDE1-206ENST00000483030 HPS4Q9NQG7 708 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 HSFX1Q9UBD0 423 aa8□□□□□ -1.13
CSDE1-206ENST00000483030 CACNA1GO43497 2377 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 CCDC163A0A0D9SF12 145 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 H0YCG3 227 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 LAD1O00515 517 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 PIRO00625 290 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 CYB561D2O14569 222 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 TRDMT1O14717 391 aaKnown RBP7.99□□□□□ -1.13
CSDE1-206ENST00000483030 DCLK1O15075 740 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 FAM189A1O60320 539 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 RNF40O75150 1001 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 KCNK5O95279 499 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 EGFP01133 1207 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 CYP11A1P05108 521 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 ADRB2P07550 413 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 COL4A2P08572 1712 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 NFICP08651 508 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 PLA2G4BP0C869 781 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 PYGBP11216 843 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 ARSAP15289 507 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 PAX3P23760 479 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 NMT1P30419 496 aaKnown RBP7.99□□□□□ -1.13
CSDE1-206ENST00000483030 AVPR1AP37288 418 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 MPLP40238 635 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 GALK1P51570 392 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 SLC12A3P55017 1021 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 BFSP1Q12934 665 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 KYAT1Q16773 422 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 PLK5Q496M5 336 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 ARSHQ5FYA8 562 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 HYIQ5T013 277 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 TXNDC8Q6A555 127 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 SMYD5Q6GMV2 418 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 JADE1Q6IE81 842 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 CC2D1AQ6P1N0 951 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-206ENST00000483030 METTL23Q86XA0 190 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 CD302Q8IX05 232 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 CAMKK1Q8N5S9 505 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 USP13Q92995 863 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-206ENST00000483030 CHFRQ96EP1 664 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 ZC3H10Q96K80 434 aaKnown RBP7.99□□□□□ -1.13
CSDE1-206ENST00000483030 HHIPQ96QV1 700 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 TSPAN18Q96SJ8 248 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 MSTO1Q9BUK6 570 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.99□□□□□ -1.13
CSDE1-206ENST00000483030 VPS45Q9NRW7 570 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 LARSQ9P2J5 1176 aaKnown RBP7.99□□□□□ -1.13
CSDE1-206ENST00000483030 TBX20Q9UMR3 447 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 CCL26Q9Y258 94 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 PCDHGA5Q9Y5G8 931 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 SDK1Q7Z5N4 2213 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 ZFHX4Q86UP3 3567 aa7.99□□□□□ -1.13
CSDE1-206ENST00000483030 TICRRQ7Z2Z1 1910 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 A0A0B4J269 797 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 ANO9A1A5B4 782 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 C4orf47A7E2U8 309 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 HNRNPDLO14979 420 aaKnown RBP7.98□□□□□ -1.13
CSDE1-206ENST00000483030 AKAP3O75969 853 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 F11P03951 625 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 HAPLN1P10915 354 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-206ENST00000483030 HMGA1P17096 107 aaKnown RBP7.98□□□□□ -1.13
CSDE1-206ENST00000483030 ACOT2P49753 483 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 NCKAP1LP55160 1127 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 NLRP12P59046 1061 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 AMPD2Q01433 879 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 DHX8Q14562 1220 aaKnown RBP7.98□□□□□ -1.13
CSDE1-206ENST00000483030 TMEM132DQ14C87 1099 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 WSCD1Q658N2 575 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 RNF43Q68DV7 783 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 NAIF1Q69YI7 327 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-206ENST00000483030 TCEAL6Q6IPX3 200 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 PSAPL1Q6NUJ1 521 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 TMEM150AQ86TG1 271 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 THEM5Q8N1Q8 247 aa7.98□□□□□ -1.13
CSDE1-206ENST00000483030 MYCT1Q8N699 235 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms