RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 SIX5Q8N196 739 aa14.9□□□□□ -0.02
VARS-225ENST00000482996 TTC9BQ8N6N2 239 aa14.9□□□□□ -0.02
VARS-225ENST00000482996 FLCNQ8NFG4 579 aa14.9□□□□□ -0.02
VARS-225ENST00000482996 ST13P5Q8NFI4 369 aaPredicted RBP14.9□□□□□ -0.02
VARS-225ENST00000482996 TMEM174Q8WUU8 243 aa14.9□□□□□ -0.02
VARS-225ENST00000482996 KXD1Q9BQD3 176 aa14.9□□□□□ -0.02
VARS-225ENST00000482996 RPP25Q9BUL9 199 aaKnown RBP14.9□□□□□ -0.02
VARS-225ENST00000482996 GPR88Q9GZN0 384 aa14.9□□□□□ -0.02
VARS-225ENST00000482996 DNAJC25Q9H1X3 360 aa14.9□□□□□ -0.02
VARS-225ENST00000482996 KCTD10Q9H3F6 313 aa14.9□□□□□ -0.02
VARS-225ENST00000482996 SLC2A4RGQ9NR83 387 aa14.9□□□□□ -0.02
VARS-225ENST00000482996 DMAC2Q9NW81 257 aa14.9□□□□□ -0.02
VARS-225ENST00000482996 ABI2Q9NYB9 513 aaPredicted RBP14.9□□□□□ -0.02
VARS-225ENST00000482996 FRMD4BQ9Y2L6 1034 aa14.9□□□□□ -0.02
VARS-225ENST00000482996 ECI2O75521 394 aa14.89□□□□□ -0.03
VARS-225ENST00000482996 SOAT2O75908 522 aa14.89□□□□□ -0.03
VARS-225ENST00000482996 NR3C1P04150 777 aa14.89□□□□□ -0.03
VARS-225ENST00000482996 HAPLN1P10915 354 aaPredicted RBP14.89□□□□□ -0.03
VARS-225ENST00000482996 CLCN5P51795 746 aa14.89□□□□□ -0.03
VARS-225ENST00000482996 VCPP55072 806 aaKnown RBP14.89□□□□□ -0.03
VARS-225ENST00000482996 SOWAHAQ2M3V2 549 aa14.89□□□□□ -0.03
VARS-225ENST00000482996 INTS6LQ5JSJ4 861 aaKnown RBP14.89□□□□□ -0.03
VARS-225ENST00000482996 SCARA3Q6AZY7 606 aa14.89□□□□□ -0.03
VARS-225ENST00000482996 ASTLQ6HA08 431 aaPredicted RBP14.89□□□□□ -0.03
VARS-225ENST00000482996 DNAJB7Q7Z6W7 309 aaPredicted RBP14.89□□□□□ -0.03
VARS-225ENST00000482996 FMR1NBQ8N0W7 255 aaPredicted RBP14.89□□□□□ -0.03
VARS-225ENST00000482996 GUF1Q8N442 669 aaKnown RBP14.89□□□□□ -0.03
VARS-225ENST00000482996 GPR152Q8TDT2 470 aa14.89□□□□□ -0.03
VARS-225ENST00000482996 PSMG2Q969U7 264 aa14.89□□□□□ -0.03
VARS-225ENST00000482996 MMS19Q96T76 1030 aa14.89□□□□□ -0.03
VARS-225ENST00000482996 SLITRK6Q9H5Y7 841 aa14.89□□□□□ -0.03
VARS-225ENST00000482996 CA14Q9ULX7 337 aa14.89□□□□□ -0.03
VARS-225ENST00000482996 CACNA1HO95180 2353 aa14.89□□□□□ -0.03
VARS-225ENST00000482996 STK25O00506 426 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 GABRDO14764 452 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 ACAT1P24752 427 aaKnown RBP14.88□□□□□ -0.03
VARS-225ENST00000482996 ATICP31939 592 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 PLA2G5P39877 138 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 CDR1P51861 262 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 NUBP1P53384 320 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 TNNC1P63316 161 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 PFKPQ01813 784 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 FAM160A1Q05DH4 1040 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 BIRC3Q13489 604 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 TEAD2Q15562 447 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 CEP135Q66GS9 1140 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 OSTM1Q86WC4 334 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 TMC8Q8IU68 726 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 SHKBP1Q8TBC3 707 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 PARD3BQ8TEW8 1205 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 SMARCD2Q92925 531 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 SYAP1Q96A49 352 aaPredicted RBP14.88□□□□□ -0.03
VARS-225ENST00000482996 ELSPBP1Q96BH3 223 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 GCNAQ96QF7 691 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 LRRC3Q9BY71 257 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 ZFP14Q9HCL3 533 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 ABCB6Q9NP58 842 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 ARHGEF3Q9NR81 526 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 RMND1Q9NWS8 449 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 HOOK1Q9UJC3 728 aaKnown RBP14.88□□□□□ -0.03
VARS-225ENST00000482996 CIZ1Q9ULV3 898 aaPredicted RBP14.88□□□□□ -0.03
VARS-225ENST00000482996 MAPK8IP1Q9UQF2 711 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 TRAF3IP3Q9Y228 551 aa14.88□□□□□ -0.03
VARS-225ENST00000482996 A0A1W2PRU2 124 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 MOSPD3O75425 235 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 CLSTN1O94985 981 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 SMC2O95347 1197 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 CST3P01034 146 aaPredicted RBP14.87□□□□□ -0.03
VARS-225ENST00000482996 FAM163BP0C2L3 166 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 GJA1P17302 382 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 WARSP23381 471 aaKnown RBP14.87□□□□□ -0.03
VARS-225ENST00000482996 RPL13P26373 211 aaKnown RBP14.87□□□□□ -0.03
VARS-225ENST00000482996 CASP4P49662 377 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 RPL10AP62906 217 aaKnown RBP14.87□□□□□ -0.03
VARS-225ENST00000482996 GPC5P78333 572 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 WDR72Q3MJ13 1102 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 ARHGAP15Q53QZ3 475 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 FAM78AQ5JUQ0 283 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 TANGO2Q6ICL3 276 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 LIMS2Q7Z4I7 341 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 SPATA2LQ8IUW3 424 aaPredicted RBP14.87□□□□□ -0.03
VARS-225ENST00000482996 ZNF516Q92618 1163 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 SHDQ96IW2 340 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 ASB16Q96NS5 453 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 LPIN3Q9BQK8 851 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 SYT15Q9BQS2 421 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 PI4K2AQ9BTU6 479 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 GZF1Q9H116 711 aaPredicted RBP14.87□□□□□ -0.03
VARS-225ENST00000482996 SNX25Q9H3E2 840 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 ATXN3LQ9H3M9 355 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 TMLHEQ9NVH6 421 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 GTF3C4Q9UKN8 822 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 CDH9Q9ULB4 789 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 PIEZO1Q92508 2521 aa14.87□□□□□ -0.03
VARS-225ENST00000482996 KRBA1A5PL33 1030 aa14.86□□□□□ -0.03
VARS-225ENST00000482996 LRRIQ3A6PVS8 624 aaPredicted RBP14.86□□□□□ -0.03
VARS-225ENST00000482996 TACC1O75410 805 aa14.86□□□□□ -0.03
VARS-225ENST00000482996 STAU1O95793 577 aaKnown RBP14.86□□□□□ -0.03
VARS-225ENST00000482996 ATF6P18850 670 aa14.86□□□□□ -0.03
VARS-225ENST00000482996 NR2F2P24468 414 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms