RNA–Protein interactions for RNA: ENST00000482630.6

VEGFA-213, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-213ENST00000482630 LRRTM3Q86VH5 581 aa27.11■■□□□ 1.93
VEGFA-213ENST00000482630 XXYLT1Q8NBI6 393 aa27.11■■□□□ 1.93
VEGFA-213ENST00000482630 SPATA18Q8TC71 538 aa27.11■■□□□ 1.93
VEGFA-213ENST00000482630 PAGE5Q96GU1 130 aa27.11■■□□□ 1.93
VEGFA-213ENST00000482630 ZSWIM3Q96MP5 696 aa27.11■■□□□ 1.93
VEGFA-213ENST00000482630 PHOX2BQ99453 314 aa27.11■■□□□ 1.93
VEGFA-213ENST00000482630 ABI2Q9NYB9 513 aaPredicted RBP27.11■■□□□ 1.93
VEGFA-213ENST00000482630 SNX9Q9Y5X1 595 aa27.11■■□□□ 1.93
VEGFA-213ENST00000482630 A0A1W2PRU2 124 aa27.1■■□□□ 1.93
VEGFA-213ENST00000482630 CLIC2O15247 247 aa27.1■■□□□ 1.93
VEGFA-213ENST00000482630 MYL7Q01449 175 aa27.1■■□□□ 1.93
VEGFA-213ENST00000482630 KNOP1Q1ED39 458 aaKnown RBP27.1■■□□□ 1.93
VEGFA-213ENST00000482630 TOP6BLQ8N6T0 577 aa27.1■■□□□ 1.93
VEGFA-213ENST00000482630 RDH13Q8NBN7 331 aa27.1■■□□□ 1.93
VEGFA-213ENST00000482630 OR5B17Q8NGF7 314 aa27.1■■□□□ 1.93
VEGFA-213ENST00000482630 ZSCAN18Q8TBC5 510 aaPredicted RBP27.1■■□□□ 1.93
VEGFA-213ENST00000482630 FNBP1Q96RU3 617 aa27.1■■□□□ 1.93
VEGFA-213ENST00000482630 ACBD6Q9BR61 282 aa27.1■■□□□ 1.93
VEGFA-213ENST00000482630 TRPV4Q9HBA0 871 aa27.1■■□□□ 1.93
VEGFA-213ENST00000482630 EXOC1Q9NV70 894 aa27.1■■□□□ 1.93
VEGFA-213ENST00000482630 DDX43Q9NXZ2 648 aaKnown RBP27.1■■□□□ 1.93
VEGFA-213ENST00000482630 PCDHB5Q9Y5E4 795 aa27.1■■□□□ 1.93
VEGFA-213ENST00000482630 PTPRJQ12913 1337 aa27.1■■□□□ 1.93
VEGFA-213ENST00000482630 PRPF40AO75400 957 aaKnown RBP27.09■■□□□ 1.93
VEGFA-213ENST00000482630 MYL1P05976 194 aa27.09■■□□□ 1.93
VEGFA-213ENST00000482630 NFE2Q16621 373 aaPredicted RBP27.09■■□□□ 1.93
VEGFA-213ENST00000482630 PJA1Q8NG27 643 aa27.09■■□□□ 1.93
VEGFA-213ENST00000482630 TRMT61BQ9BVS5 477 aaKnown RBP27.09■■□□□ 1.93
VEGFA-213ENST00000482630 SCAND2PQ9GZW5 306 aaPredicted RBP27.09■■□□□ 1.93
VEGFA-213ENST00000482630 HPSEQ9Y251 543 aa27.09■■□□□ 1.93
VEGFA-213ENST00000482630 KANSL1LA0AUZ9 987 aa27.08■■□□□ 1.93
VEGFA-213ENST00000482630 DLATP10515 647 aaKnown RBP27.08■■□□□ 1.93
VEGFA-213ENST00000482630 HAPLN1P10915 354 aaPredicted RBP27.08■■□□□ 1.93
VEGFA-213ENST00000482630 LHX1P48742 406 aa27.08■■□□□ 1.93
VEGFA-213ENST00000482630 PSMD2Q13200 908 aa27.08■■□□□ 1.93
VEGFA-213ENST00000482630 PSMD6Q15008 389 aa27.08■■□□□ 1.93
VEGFA-213ENST00000482630 TAF12Q16514 161 aa27.08■■□□□ 1.93
VEGFA-213ENST00000482630 C12orf56Q8IXR9 622 aa27.08■■□□□ 1.93
VEGFA-213ENST00000482630 ADGRF2Q8IZF7 708 aa27.08■■□□□ 1.93
VEGFA-213ENST00000482630 GOLGA5Q8TBA6 731 aa27.08■■□□□ 1.93
VEGFA-213ENST00000482630 DEPDC1BQ8WUY9 529 aa27.08■■□□□ 1.93
VEGFA-213ENST00000482630 DNASE1L2Q92874 299 aa27.08■■□□□ 1.93
VEGFA-213ENST00000482630 E2F7Q96AV8 911 aa27.08■■□□□ 1.93
VEGFA-213ENST00000482630 HPDLQ96IR7 371 aa27.08■■□□□ 1.93
VEGFA-213ENST00000482630 LPIN3Q9BQK8 851 aa27.08■■□□□ 1.93
VEGFA-213ENST00000482630 DDX23Q9BUQ8 820 aaKnown RBP27.08■■□□□ 1.93
VEGFA-213ENST00000482630 FOXQ1Q9C009 403 aa27.08■■□□□ 1.93
VEGFA-213ENST00000482630 BRD9Q9H8M2 597 aa27.08■■□□□ 1.93
VEGFA-213ENST00000482630 ZNF334Q9HCZ1 680 aaPredicted RBP27.08■■□□□ 1.93
VEGFA-213ENST00000482630 KLRC4O43908 158 aa27.07■■□□□ 1.92
VEGFA-213ENST00000482630 DCNP07585 359 aaKnown RBP27.07■■□□□ 1.92
VEGFA-213ENST00000482630 PSMC3P17980 439 aa27.07■■□□□ 1.92
VEGFA-213ENST00000482630 ATF6P18850 670 aa27.07■■□□□ 1.92
VEGFA-213ENST00000482630 TNNI1P19237 187 aa27.07■■□□□ 1.92
VEGFA-213ENST00000482630 GABRR2P28476 465 aa27.07■■□□□ 1.92
VEGFA-213ENST00000482630 SYKP43405 635 aa27.07■■□□□ 1.92
VEGFA-213ENST00000482630 CDR1P51861 262 aa27.07■■□□□ 1.92
VEGFA-213ENST00000482630 CYP24A1Q07973 514 aa27.07■■□□□ 1.92
VEGFA-213ENST00000482630 GRM2Q14416 872 aa27.07■■□□□ 1.92
VEGFA-213ENST00000482630 ARHGAP15Q53QZ3 475 aa27.07■■□□□ 1.92
VEGFA-213ENST00000482630 SCARA3Q6AZY7 606 aa27.07■■□□□ 1.92
VEGFA-213ENST00000482630 DPH6Q7L8W6 267 aa27.07■■□□□ 1.92
VEGFA-213ENST00000482630 CHAMP1Q96JM3 812 aa27.07■■□□□ 1.92
VEGFA-213ENST00000482630 GCNAQ96QF7 691 aa27.07■■□□□ 1.92
VEGFA-213ENST00000482630 CGRRF1Q99675 332 aa27.07■■□□□ 1.92
VEGFA-213ENST00000482630 ATXN3LQ9H3M9 355 aa27.07■■□□□ 1.92
VEGFA-213ENST00000482630 PCSK1P29120 753 aa27.06■■□□□ 1.92
VEGFA-213ENST00000482630 ANGPT1Q15389 498 aa27.06■■□□□ 1.92
VEGFA-213ENST00000482630 KMT5BQ4FZB7 885 aa27.06■■□□□ 1.92
VEGFA-213ENST00000482630 INTS6LQ5JSJ4 861 aaKnown RBP27.06■■□□□ 1.92
VEGFA-213ENST00000482630 VITQ6UXI7 678 aa27.06■■□□□ 1.92
VEGFA-213ENST00000482630 GAREM2Q75VX8 874 aa27.06■■□□□ 1.92
VEGFA-213ENST00000482630 TRAPPC11Q7Z392 1133 aa27.06■■□□□ 1.92
VEGFA-213ENST00000482630 IRF7Q92985 503 aa27.06■■□□□ 1.92
VEGFA-213ENST00000482630 CCDC127Q96BQ5 260 aa27.06■■□□□ 1.92
VEGFA-213ENST00000482630 TMLHEQ9NVH6 421 aa27.06■■□□□ 1.92
VEGFA-213ENST00000482630 ACAT1P24752 427 aaKnown RBP27.05■■□□□ 1.92
VEGFA-213ENST00000482630 CDC25CP30307 473 aa27.05■■□□□ 1.92
VEGFA-213ENST00000482630 VIPR2P41587 438 aa27.05■■□□□ 1.92
VEGFA-213ENST00000482630 STK4Q13043 487 aa27.05■■□□□ 1.92
VEGFA-213ENST00000482630 BECN1Q14457 450 aa27.05■■□□□ 1.92
VEGFA-213ENST00000482630 SOWAHAQ2M3V2 549 aa27.05■■□□□ 1.92
VEGFA-213ENST00000482630 TPRG1Q6ZUI0 275 aa27.05■■□□□ 1.92
VEGFA-213ENST00000482630 MFSD6LQ8IWD5 586 aa27.05■■□□□ 1.92
VEGFA-213ENST00000482630 GIPC2Q8TF65 315 aa27.05■■□□□ 1.92
VEGFA-213ENST00000482630 OSBPL6Q9BZF3 934 aa27.05■■□□□ 1.92
VEGFA-213ENST00000482630 ABCB6Q9NP58 842 aa27.05■■□□□ 1.92
VEGFA-213ENST00000482630 FAM237AA0A1B0GTK4 181 aa27.04■■□□□ 1.92
VEGFA-213ENST00000482630 HEPACAM2A8MVW5 462 aa27.04■■□□□ 1.92
VEGFA-213ENST00000482630 GABRDO14764 452 aa27.04■■□□□ 1.92
VEGFA-213ENST00000482630 EXOC3O60645 756 aa27.04■■□□□ 1.92
VEGFA-213ENST00000482630 GDI1P31150 447 aa27.04■■□□□ 1.92
VEGFA-213ENST00000482630 UBXN2BQ14CS0 331 aa27.04■■□□□ 1.92
VEGFA-213ENST00000482630 OSTM1Q86WC4 334 aa27.04■■□□□ 1.92
VEGFA-213ENST00000482630 KIAA0895Q8NCT3 520 aa27.04■■□□□ 1.92
VEGFA-213ENST00000482630 PI4K2AQ9BTU6 479 aa27.04■■□□□ 1.92
VEGFA-213ENST00000482630 HEBP1Q9NRV9 189 aa27.04■■□□□ 1.92
VEGFA-213ENST00000482630 DLGAP2Q9P1A6 1054 aa27.04■■□□□ 1.92
VEGFA-213ENST00000482630 NDUFA8P51970 172 aa27.03■■□□□ 1.92
VEGFA-213ENST00000482630 STXBP5Q5T5C0 1151 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms