RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.6□□□□□ -1.67
VPS41-212ENST00000482217 TP53I13Q8NBR0 393 aaPredicted RBP4.6□□□□□ -1.67
VPS41-212ENST00000482217 SIMC1Q8NDZ2 872 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 LCORQ96JN0 433 aaPredicted RBP4.6□□□□□ -1.67
VPS41-212ENST00000482217 TEPSINQ96N21 525 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 C7orf25Q9BPX7 421 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 FDXACB1Q9BRP7 624 aaPredicted RBP4.6□□□□□ -1.67
VPS41-212ENST00000482217 LSM14BQ9BX40 385 aaKnown RBP4.6□□□□□ -1.67
VPS41-212ENST00000482217 KIAA1683Q9H0B3 1180 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 CERS4Q9HA82 394 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 TRPV4Q9HBA0 871 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 TBC1D29Q9UFV1 150 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 DNAI1Q9UI46 699 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 ITM2BQ9Y287 266 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 TMEM98Q9Y2Y6 226 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 A0A0G2JLL6 359 aaPredicted RBP4.59□□□□□ -1.67
VPS41-212ENST00000482217 A0A1B0GTL3 188 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 FAM25EA8MYX2 175 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 B4DLN1 442 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 KPNA5O15131 536 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 SPTLC2O15270 562 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 DAPK3O43293 454 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 USO1O60763 962 aaKnown RBP4.59□□□□□ -1.67
VPS41-212ENST00000482217 NDUFS2O75306 463 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 GOSR1O95249 250 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 APBB3O95704 486 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 GUCA1CO95843 209 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 APOA4P06727 396 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 C5AR1P21730 350 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 AKAP5P24588 427 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 CSF2RBP32927 897 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 PHKA1P46020 1223 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 STAT5BP51692 787 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 SLC16A1P53985 500 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 SLURP1P55000 103 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 CSE1LP55060 971 aaKnown RBP4.59□□□□□ -1.67
VPS41-212ENST00000482217 TPD52P55327 224 aaPredicted RBP4.59□□□□□ -1.67
VPS41-212ENST00000482217 POLR2FP61218 127 aaKnown RBP4.59□□□□□ -1.67
VPS41-212ENST00000482217 EIF4G1Q04637 1599 aaKnown RBP4.59□□□□□ -1.67
VPS41-212ENST00000482217 GALNT1Q10472 559 aaPredicted RBP4.59□□□□□ -1.67
VPS41-212ENST00000482217 MRPL28Q13084 256 aaKnown RBP4.59□□□□□ -1.67
VPS41-212ENST00000482217 BLMHQ13867 455 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 NFIXQ14938 502 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 TAF12Q16514 161 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 VMACQ2NL98 169 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 ZMAT1Q5H9K5 638 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 METTL24Q5JXM2 366 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 FAM124AQ86V42 546 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 ZNF619Q8N2I2 560 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 PPM1NQ8N819 430 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 IPMKQ8NFU5 416 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 GSDMBQ8TAX9 411 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 NEK9Q8TD19 979 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 RRP36Q96EU6 259 aaKnown RBP4.59□□□□□ -1.67
VPS41-212ENST00000482217 C20orf173Q96LM9 149 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 FAM210AQ96ND0 272 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 NCAPGQ9BPX3 1015 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 SLF1Q9BQI6 1058 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 PI4K2AQ9BTU6 479 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 TXLNGYQ9BZA5 131 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 GHITMQ9H3K2 345 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 GREM2Q9H772 168 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 ACAD9Q9H845 621 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 GRPEL1Q9HAV7 217 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 WASH6PQ9NQA3 447 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 DMRT3Q9NQL9 472 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 SCOCQ9UIL1 159 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 MAGEL2Q9UJ55 1249 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 ITGB1BP2Q9UKP3 347 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 ATAD2BQ9ULI0 1458 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 RAD54L2Q9Y4B4 1467 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 PCDHGB2Q9Y5G2 931 aa4.59□□□□□ -1.67
VPS41-212ENST00000482217 A0A1W2PR48 441 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 PGPEP1LA6NFU8 196 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 MROH6A6NGR9 719 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 OTOL1A6NHN0 477 aaPredicted RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 AKR1B15C9JRZ8 316 aaPredicted RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 MUSKO15146 869 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 OFD1O75665 1012 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 URI1O94763 535 aaPredicted RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 LY86O95711 162 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 CSTBP04080 98 aaKnown RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 CLTBP09497 229 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 GAAP10253 952 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 GZMAP12544 262 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 PDIA3P30101 505 aaKnown RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 HADHAP40939 763 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 WASP42768 502 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 MCAMP43121 646 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 MCM2P49736 904 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 CALD1Q05682 793 aaKnown RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 BTKQ06187 659 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 CD69Q07108 199 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 MGAT5Q09328 741 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 IFIT5Q13325 482 aaKnown RBP4.58□□□□□ -1.68
VPS41-212ENST00000482217 BECN1Q14457 450 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 KRT32Q14532 448 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 PCOLCEQ15113 449 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 FKBP15Q5T1M5 1219 aa4.58□□□□□ -1.68
VPS41-212ENST00000482217 CNSTQ6PJW8 725 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms