RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 TAS2R40P59535 323 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 DR1Q01658 176 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 SPDYCQ5MJ68 293 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 DENND1BQ6P3S1 775 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 TTC27Q6P3X3 843 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 CATSPER4Q7RTX7 472 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 ZNF677Q86XU0 584 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 IFNLR1Q8IU57 520 aaPredicted RBP15.32■□□□□ 0.04
CHD3-211ENST00000481999 KIF12Q96FN5 646 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 TUBGCP4Q9UGJ1 667 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 FAM187AA6NFU0 413 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 CPP00450 1065 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 SLC10A3P09131 477 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 C6orf222P0C671 652 aaPredicted RBP15.32■□□□□ 0.04
CHD3-211ENST00000481999 DHX9Q08211 1270 aaKnown RBP15.32■□□□□ 0.04
CHD3-211ENST00000481999 DHX34Q14147 1143 aaKnown RBP15.32■□□□□ 0.04
CHD3-211ENST00000481999 TMEM132DQ14C87 1099 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 TTC31Q49AM3 519 aaPredicted RBP15.32■□□□□ 0.04
CHD3-211ENST00000481999 ZNF667Q5HYK9 610 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 AGBL2Q5U5Z8 902 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 UBL4BQ8N7F7 174 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 PRELID2Q8N945 189 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 OR2W6PQ8NHA6 318 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 ACAP3Q96P50 834 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 LPIN3Q9BQK8 851 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 RNF39Q9H2S5 420 aa15.32■□□□□ 0.04
CHD3-211ENST00000481999 MYO1FO00160 1098 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 TLR3O15455 904 aaKnown RBP15.31■□□□□ 0.04
CHD3-211ENST00000481999 HPDP32754 393 aaPredicted RBP15.31■□□□□ 0.04
CHD3-211ENST00000481999 SSR1P43307 286 aaKnown RBP15.31■□□□□ 0.04
CHD3-211ENST00000481999 AP3M2P53677 418 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 LACTBP83111 547 aaPredicted RBP15.31■□□□□ 0.04
CHD3-211ENST00000481999 OGDHQ02218 1023 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 ZNF252P-AS1Q0IIN9 211 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 C12orf29Q8N999 325 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 ATG4AQ8WYN0 398 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 MCEEQ96PE7 176 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 FMO2Q99518 471 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 ERP44Q9BS26 406 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 HEMGNQ9BXL5 484 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 ELOVL4Q9GZR5 314 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.31■□□□□ 0.04
CHD3-211ENST00000481999 CACNG4Q9UBN1 327 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 PTPN22Q9Y2R2 807 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 NRCAMQ92823 1304 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 MMP8P22894 467 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 IGFBP6P24592 240 aaPredicted RBP15.31■□□□□ 0.04
CHD3-211ENST00000481999 RAD23BP54727 409 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 PPARDQ03181 441 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 POU5F1BQ06416 359 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 TXNRD3NBQ6F5E7 133 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 CYP4F22Q6NT55 531 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 MICALCLQ6ZW33 695 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 TRIB2Q92519 343 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 HPDLQ96IR7 371 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 FAM81BQ96LP2 452 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 RPS6KC1Q96S38 1066 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 OSBPL7Q9BZF2 842 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 GOLGA2P5Q9HBQ8 144 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 PCDHA3Q9Y5H8 950 aa15.31■□□□□ 0.04
CHD3-211ENST00000481999 PPFIA2O75334 1257 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 IL18RAPO95256 599 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 PSMC4P43686 418 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 PSEN2P49810 448 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 EIF3BP55884 814 aaKnown RBP15.3■□□□□ 0.04
CHD3-211ENST00000481999 SURF1Q15526 300 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 DUPD1Q68J44 220 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 CXCL17Q6UXB2 119 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 C1orf54Q8WWF1 131 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 WNT8BQ93098 351 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 DPP3Q9NY33 737 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 PIN4Q9Y237 131 aaKnown RBP15.3■□□□□ 0.04
CHD3-211ENST00000481999 F8VP50 259 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 GOLGA8SH3BPF8 625 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 RARAP10276 462 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 ADAM17P78536 824 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 SNX1Q13596 522 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 FSCN1Q16658 493 aaKnown RBP15.3■□□□□ 0.04
CHD3-211ENST00000481999 PTPN20Q4JDL3 420 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 NLRP14Q86W24 1093 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 SLC4A11Q8NBS3 891 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 APBA2Q99767 749 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 ADPGKQ9BRR6 497 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 WNT8AQ9H1J5 351 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 RASAL2Q9UJF2 1139 aa15.3■□□□□ 0.04
CHD3-211ENST00000481999 MBLAC1A4D2B0 266 aaPredicted RBP15.29■□□□□ 0.04
CHD3-211ENST00000481999 MEIS3P2A8K0S8 358 aa15.29■□□□□ 0.04
CHD3-211ENST00000481999 KIAA0754O94854 1291 aa15.29■□□□□ 0.04
CHD3-211ENST00000481999 IBSPP21815 317 aaPredicted RBP15.29■□□□□ 0.04
CHD3-211ENST00000481999 RGS2P41220 211 aa15.29■□□□□ 0.04
CHD3-211ENST00000481999 DRG2P55039 364 aaKnown RBP15.29■□□□□ 0.04
CHD3-211ENST00000481999 ADCY2Q08462 1091 aa15.29■□□□□ 0.04
CHD3-211ENST00000481999 SIX1Q15475 284 aaPredicted RBP15.29■□□□□ 0.04
CHD3-211ENST00000481999 DEFB115Q30KQ5 88 aa15.29■□□□□ 0.04
CHD3-211ENST00000481999 PHF13Q86YI8 300 aaPredicted RBP15.29■□□□□ 0.04
CHD3-211ENST00000481999 UBA3Q8TBC4 463 aa15.29■□□□□ 0.04
CHD3-211ENST00000481999 ZNF473Q8WTR7 871 aaKnown RBP15.29■□□□□ 0.04
CHD3-211ENST00000481999 CCT8L2Q96SF2 557 aa15.29■□□□□ 0.04
CHD3-211ENST00000481999 BCO2Q9BYV7 579 aa15.29■□□□□ 0.04
CHD3-211ENST00000481999 SLC12A6Q9UHW9 1150 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms