RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 TEX28O15482 410 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 CAVIN2O95810 425 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 WEE2P0C1S8 567 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 PRKCSHP14314 528 aaPredicted RBP13.11□□□□□ -0.31
TRA2B-212ENST00000480461 TYMPP19971 482 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 PAX3P23760 479 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 ASPAP45381 313 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 RAP1GAPP47736 663 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 CDR1P51861 262 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 MYL7Q01449 175 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 SIGLEC14Q08ET2 396 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 LRMPQ12912 555 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 CBX2Q14781 532 aaPredicted RBP13.11□□□□□ -0.31
TRA2B-212ENST00000480461 ZNF699Q32M78 642 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 KIAA1841Q6NSI8 718 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 PHLDB3Q6NSJ2 640 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 RBM23Q86U06 439 aaKnown RBP13.11□□□□□ -0.31
TRA2B-212ENST00000480461 LRRTM3Q86VH5 581 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 RNF214Q8ND24 703 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 TAF4BQ92750 862 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 KAT5Q92993 513 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 ZNF560Q96MR9 790 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 ARID3AQ99856 593 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 LPIN3Q9BQK8 851 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 RBSNQ9H1K0 784 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 SMYD3Q9H7B4 428 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 NGRNQ9NPE2 291 aaKnown RBP13.11□□□□□ -0.31
TRA2B-212ENST00000480461 ENTPD7Q9NQZ7 604 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 MRPL17Q9NRX2 175 aaKnown RBP13.11□□□□□ -0.31
TRA2B-212ENST00000480461 FBXL5Q9UKA1 691 aa13.11□□□□□ -0.31
TRA2B-212ENST00000480461 VWA8A3KMH1 1905 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.1□□□□□ -0.31
TRA2B-212ENST00000480461 BECN2A8MW95 431 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 P4HA2O15460 535 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 TEX33O43247 280 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 CLASP2O75122 1294 aaKnown RBP13.1□□□□□ -0.31
TRA2B-212ENST00000480461 ATP2C2O75185 946 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 CDK11BP21127 795 aaKnown RBP13.1□□□□□ -0.31
TRA2B-212ENST00000480461 PON1P27169 355 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 KLK7P49862 253 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 KCNC3Q14003 757 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 SMC1AQ14683 1233 aaKnown RBP13.1□□□□□ -0.31
TRA2B-212ENST00000480461 PSMD5Q16401 504 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 PTPN21Q16825 1174 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 CCDC142Q17RM4 750 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 ZNF667Q5HYK9 610 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 OVOS1Q6IE37 1185 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 PDE12Q6L8Q7 609 aaKnown RBP13.1□□□□□ -0.31
TRA2B-212ENST00000480461 GJB7Q6PEY0 223 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 LILRA6Q6PI73 481 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 DPH6Q7L8W6 267 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 GLYCTKQ8IVS8 523 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 ARHGEF19Q8IW93 802 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 GPR65Q8IYL9 337 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 TOP6BLQ8N6T0 577 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 APPL2Q8NEU8 664 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 VN1R2Q8NFZ6 395 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 OR10T2Q8NGX3 314 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 FEZF2Q8TBJ5 459 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 SLC22A17Q8WUG5 538 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 ATOH1Q92858 354 aaPredicted RBP13.1□□□□□ -0.31
TRA2B-212ENST00000480461 MMS19Q96T76 1030 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 BCO2Q9BYV7 579 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 INTS2Q9H0H0 1204 aaKnown RBP13.1□□□□□ -0.31
TRA2B-212ENST00000480461 SIX2Q9NPC8 291 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 CLEC1BQ9P126 229 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 FNIP2Q9P278 1114 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 MTRRQ9UBK8 725 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 BACE2Q9Y5Z0 518 aa13.1□□□□□ -0.31
TRA2B-212ENST00000480461 PROB1E7EW31 1015 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 AP5Z1O43299 807 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 HUS1O60921 280 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 TACC1O75410 805 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 VNN2O95498 520 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 URODP06132 367 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 OR4Q2P0C623 313 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 SPATA31D3P0C874 917 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 ODC1P11926 461 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 AVPR2P30518 371 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 OR1D2P34982 312 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 NRIP1P48552 1158 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 NOP14P78316 857 aaKnown RBP13.09□□□□□ -0.31
TRA2B-212ENST00000480461 YWHAHQ04917 246 aaPredicted RBP13.09□□□□□ -0.31
TRA2B-212ENST00000480461 CTXN3Q4LDR2 81 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 SLC8B1Q6J4K2 584 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 SPATA31D4Q6ZUB0 917 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 ANKS3Q6ZW76 656 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 ASCL5Q7RTU5 278 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 PALB2Q86YC2 1186 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 WHAMMQ8TF30 809 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 PKMYT1Q99640 499 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 IRF2BPLQ9H1B7 796 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 TLE6Q9H808 572 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 RTN4Q9NQC3 1192 aaKnown RBP13.09□□□□□ -0.31
TRA2B-212ENST00000480461 TMLHEQ9NVH6 421 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 STK39Q9UEW8 545 aa13.09□□□□□ -0.31
TRA2B-212ENST00000480461 AJAP1Q9UKB5 411 aaPredicted RBP13.09□□□□□ -0.31
TRA2B-212ENST00000480461 R3HCC1Q9Y3T6 440 aaKnown RBP13.09□□□□□ -0.31
TRA2B-212ENST00000480461 USP15Q9Y4E8 981 aaPredicted RBP13.09□□□□□ -0.31
TRA2B-212ENST00000480461 CDY1Q9Y6F8 540 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms