RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 CFHP08603 1231 aa18.71■□□□□ 0.59
UPF3A-206ENST00000480362 VDRP11473 427 aa18.71■□□□□ 0.59
UPF3A-206ENST00000480362 SSTR3P32745 418 aaPredicted RBP18.71■□□□□ 0.59
UPF3A-206ENST00000480362 PBX3P40426 434 aa18.71■□□□□ 0.59
UPF3A-206ENST00000480362 MAGEA1P43355 309 aa18.71■□□□□ 0.59
UPF3A-206ENST00000480362 LHX1P48742 406 aa18.71■□□□□ 0.59
UPF3A-206ENST00000480362 ALDH7A1P49419 539 aaKnown RBP18.71■□□□□ 0.59
UPF3A-206ENST00000480362 SPOUT1Q5T280 376 aaKnown RBP18.71■□□□□ 0.59
UPF3A-206ENST00000480362 ALKBH5Q6P6C2 394 aaKnown RBP18.71■□□□□ 0.59
UPF3A-206ENST00000480362 CCAR2Q8N163 923 aaKnown RBP18.71■□□□□ 0.59
UPF3A-206ENST00000480362 CRYBG2Q8N1P7 616 aa18.71■□□□□ 0.59
UPF3A-206ENST00000480362 ZBED2Q9BTP6 218 aa18.71■□□□□ 0.59
UPF3A-206ENST00000480362 MARCH5Q9NX47 278 aa18.71■□□□□ 0.59
UPF3A-206ENST00000480362 ADAM28Q9UKQ2 775 aa18.71■□□□□ 0.59
UPF3A-206ENST00000480362 KIAA1257Q9ULG3 409 aa18.71■□□□□ 0.59
UPF3A-206ENST00000480362 NENFQ9UMX5 172 aa18.71■□□□□ 0.59
UPF3A-206ENST00000480362 PCDHA13Q9Y5I0 950 aa18.71■□□□□ 0.59
UPF3A-206ENST00000480362 TMCO5BA8MYB1 307 aa18.7■□□□□ 0.58
UPF3A-206ENST00000480362 ZSCAN12O43309 604 aa18.7■□□□□ 0.58
UPF3A-206ENST00000480362 MED7O43513 233 aa18.7■□□□□ 0.58
UPF3A-206ENST00000480362 CYP11A1P05108 521 aa18.7■□□□□ 0.58
UPF3A-206ENST00000480362 TYMPP19971 482 aa18.7■□□□□ 0.58
UPF3A-206ENST00000480362 HTRA4P83105 476 aaPredicted RBP18.7■□□□□ 0.58
UPF3A-206ENST00000480362 SGO2Q562F6 1265 aa18.7■□□□□ 0.58
UPF3A-206ENST00000480362 PALB2Q86YC2 1186 aa18.7■□□□□ 0.58
UPF3A-206ENST00000480362 SPATA18Q8TC71 538 aa18.7■□□□□ 0.58
UPF3A-206ENST00000480362 DNAI2Q9GZS0 605 aa18.7■□□□□ 0.58
UPF3A-206ENST00000480362 MTIF3Q9H2K0 278 aaKnown RBP18.7■□□□□ 0.58
UPF3A-206ENST00000480362 DPEP3Q9H4B8 488 aa18.7■□□□□ 0.58
UPF3A-206ENST00000480362 KCND1Q9NSA2 647 aa18.7■□□□□ 0.58
UPF3A-206ENST00000480362 DDX43Q9NXZ2 648 aaKnown RBP18.7■□□□□ 0.58
UPF3A-206ENST00000480362 MRPL42Q9Y6G3 142 aaKnown RBP18.7■□□□□ 0.58
UPF3A-206ENST00000480362 USP27XA6NNY8 438 aa18.69■□□□□ 0.58
UPF3A-206ENST00000480362 ESPNB1AK53 854 aa18.69■□□□□ 0.58
UPF3A-206ENST00000480362 ACAT1P24752 427 aaKnown RBP18.69■□□□□ 0.58
UPF3A-206ENST00000480362 CNGA2Q16280 664 aa18.69■□□□□ 0.58
UPF3A-206ENST00000480362 C10orf76Q5T2E6 689 aa18.69■□□□□ 0.58
UPF3A-206ENST00000480362 KIAA1328Q86T90 577 aa18.69■□□□□ 0.58
UPF3A-206ENST00000480362 HERC6Q8IVU3 1022 aa18.69■□□□□ 0.58
UPF3A-206ENST00000480362 REXO1L1PQ8IX06 675 aa18.69■□□□□ 0.58
UPF3A-206ENST00000480362 C12orf29Q8N999 325 aa18.69■□□□□ 0.58
UPF3A-206ENST00000480362 PHOSPHO2Q8TCD6 241 aa18.69■□□□□ 0.58
UPF3A-206ENST00000480362 TNIP3Q96KP6 325 aa18.69■□□□□ 0.58
UPF3A-206ENST00000480362 SLC9A7Q96T83 725 aa18.69■□□□□ 0.58
UPF3A-206ENST00000480362 LPIN3Q9BQK8 851 aa18.69■□□□□ 0.58
UPF3A-206ENST00000480362 TAS2R14Q9NYV8 317 aa18.69■□□□□ 0.58
UPF3A-206ENST00000480362 PCDHGC3Q9UN70 934 aa18.69■□□□□ 0.58
UPF3A-206ENST00000480362 A0A0U1RQJ8 604 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 FAM170AA1A519 330 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 CCP110O43303 1012 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 ATP2C2O75185 946 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 CYP1A1P04798 512 aaPredicted RBP18.68■□□□□ 0.58
UPF3A-206ENST00000480362 GZMAP12544 262 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 ATP2A2P16615 1042 aaKnown RBP18.68■□□□□ 0.58
UPF3A-206ENST00000480362 PTPN1P18031 435 aaKnown RBP18.68■□□□□ 0.58
UPF3A-206ENST00000480362 TKTP29401 623 aaKnown RBP18.68■□□□□ 0.58
UPF3A-206ENST00000480362 MAGEA10P43363 369 aaPredicted RBP18.68■□□□□ 0.58
UPF3A-206ENST00000480362 VAV2P52735 878 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 CLEC16AQ2KHT3 1053 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 FAM171A1Q5VUB5 890 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 OVOS1Q6IE37 1185 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 FUT10Q6P4F1 479 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 KCNT2Q6UVM3 1135 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 TRIM72Q6ZMU5 477 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 TMEM173Q86WV6 379 aaPredicted RBP18.68■□□□□ 0.58
UPF3A-206ENST00000480362 DNAAF5Q86Y56 855 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 PASD1Q8IV76 773 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 THEM5Q8N1Q8 247 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 BCL7CQ8WUZ0 217 aaPredicted RBP18.68■□□□□ 0.58
UPF3A-206ENST00000480362 ATRIPQ8WXE1 791 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 CYFIP2Q96F07 1278 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 ZNF558Q96NG5 402 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 GPR62Q9BZJ7 368 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 LUC7LQ9NQ29 371 aaKnown RBP18.68■□□□□ 0.58
UPF3A-206ENST00000480362 TFR2Q9UP52 801 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 INSL6Q9Y581 213 aa18.68■□□□□ 0.58
UPF3A-206ENST00000480362 O00370 1275 aa18.67■□□□□ 0.58
UPF3A-206ENST00000480362 SYN3O14994 580 aa18.67■□□□□ 0.58
UPF3A-206ENST00000480362 RTN2O75298 545 aa18.67■□□□□ 0.58
UPF3A-206ENST00000480362 UNGP13051 313 aaPredicted RBP18.67■□□□□ 0.58
UPF3A-206ENST00000480362 LAG3P18627 525 aa18.67■□□□□ 0.58
UPF3A-206ENST00000480362 PSMC1P62191 440 aaKnown RBP18.67■□□□□ 0.58
UPF3A-206ENST00000480362 YWHAHQ04917 246 aaPredicted RBP18.67■□□□□ 0.58
UPF3A-206ENST00000480362 ELAVL2Q12926 359 aaKnown RBP18.67■□□□□ 0.58
UPF3A-206ENST00000480362 PPP1R26Q5T8A7 1209 aaPredicted RBP18.67■□□□□ 0.58
UPF3A-206ENST00000480362 RASIP1Q5U651 963 aa18.67■□□□□ 0.58
UPF3A-206ENST00000480362 ACAD10Q6JQN1 1059 aa18.67■□□□□ 0.58
UPF3A-206ENST00000480362 DENND1BQ6P3S1 775 aa18.67■□□□□ 0.58
UPF3A-206ENST00000480362 FIBCD1Q8N539 461 aa18.67■□□□□ 0.58
UPF3A-206ENST00000480362 COLGALT1Q8NBJ5 622 aa18.67■□□□□ 0.58
UPF3A-206ENST00000480362 B3GALNT2Q8NCR0 500 aa18.67■□□□□ 0.58
UPF3A-206ENST00000480362 IGSF21Q96ID5 467 aa18.67■□□□□ 0.58
UPF3A-206ENST00000480362 PPP1R13BQ96KQ4 1090 aa18.67■□□□□ 0.58
UPF3A-206ENST00000480362 RAD9AQ99638 391 aa18.67■□□□□ 0.58
UPF3A-206ENST00000480362 RTP3Q9BQQ7 232 aa18.67■□□□□ 0.58
UPF3A-206ENST00000480362 SYT15Q9BQS2 421 aa18.67■□□□□ 0.58
UPF3A-206ENST00000480362 PACSIN1Q9BY11 444 aa18.67■□□□□ 0.58
UPF3A-206ENST00000480362 ISCUQ9H1K1 167 aa18.67■□□□□ 0.58
UPF3A-206ENST00000480362 FAM49BQ9NUQ9 324 aa18.67■□□□□ 0.58
UPF3A-206ENST00000480362 CDH9Q9ULB4 789 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms