RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 USP13Q92995 863 aaPredicted RBP13.06□□□□□ -0.32
USP11-208ENST00000480104 MTRQ99707 1265 aa13.06□□□□□ -0.32
USP11-208ENST00000480104 PDZD7Q9H5P4 517 aa13.06□□□□□ -0.32
USP11-208ENST00000480104 GDAQ9Y2T3 454 aa13.06□□□□□ -0.32
USP11-208ENST00000480104 PAXBP1Q9Y5B6 917 aa13.06□□□□□ -0.32
USP11-208ENST00000480104 SLC12A7Q9Y666 1083 aa13.06□□□□□ -0.32
USP11-208ENST00000480104 AK5Q9Y6K8 562 aa13.06□□□□□ -0.32
USP11-208ENST00000480104 TTLL13PA6NNM8 815 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 SGK1O00141 431 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 HIP1O00291 1037 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 MARCH6O60337 910 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 SOAT2O75908 522 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 OR4Q2P0C623 313 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 QARSP47897 775 aaKnown RBP13.05□□□□□ -0.32
USP11-208ENST00000480104 KCNH2Q12809 1159 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 BFSP1Q12934 665 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 MYO1EQ12965 1108 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 C6orf118Q5T5N4 469 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 SLC36A4Q6YBV0 504 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 PGBD3Q8N328 593 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 ALLCQ8N6M5 410 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 TTC9BQ8N6N2 239 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 TRIML1Q8N9V2 468 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 TXNDC5Q8NBS9 432 aaKnown RBP13.05□□□□□ -0.32
USP11-208ENST00000480104 TTC9Q92623 222 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 MED8Q96G25 268 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 NFKBIZQ9BYH8 718 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 ZDHHC5Q9C0B5 715 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 FNDC3AQ9Y2H6 1198 aaKnown RBP13.05□□□□□ -0.32
USP11-208ENST00000480104 ASB3Q9Y575 518 aa13.05□□□□□ -0.32
USP11-208ENST00000480104 KNL1Q8NG31 2342 aa13.04□□□□□ -0.32
USP11-208ENST00000480104 TCRBV21S2A2A0A5A6 115 aa13.04□□□□□ -0.32
USP11-208ENST00000480104 EML1O00423 815 aa13.04□□□□□ -0.32
USP11-208ENST00000480104 PODXLO00592 558 aa13.04□□□□□ -0.32
USP11-208ENST00000480104 KLF8O95600 359 aaPredicted RBP13.04□□□□□ -0.32
USP11-208ENST00000480104 AVPR1AP37288 418 aa13.04□□□□□ -0.32
USP11-208ENST00000480104 CLDN6P56747 220 aa13.04□□□□□ -0.32
USP11-208ENST00000480104 SCRN1Q12765 414 aa13.04□□□□□ -0.32
USP11-208ENST00000480104 ZNF574Q6ZN55 896 aaPredicted RBP13.04□□□□□ -0.32
USP11-208ENST00000480104 SGMS1Q86VZ5 419 aa13.04□□□□□ -0.32
USP11-208ENST00000480104 TMTC2Q8N394 836 aa13.04□□□□□ -0.32
USP11-208ENST00000480104 RHBDD1Q8TEB9 315 aa13.04□□□□□ -0.32
USP11-208ENST00000480104 GCNAQ96QF7 691 aa13.04□□□□□ -0.32
USP11-208ENST00000480104 IL21Q9HBE4 155 aa13.04□□□□□ -0.32
USP11-208ENST00000480104 BTBD3Q9Y2F9 522 aa13.04□□□□□ -0.32
USP11-208ENST00000480104 SLC27A5Q9Y2P5 690 aa13.04□□□□□ -0.32
USP11-208ENST00000480104 POLQO75417 2590 aa13.04□□□□□ -0.32
USP11-208ENST00000480104 TERTO14746 1132 aaKnown RBP13.03□□□□□ -0.32
USP11-208ENST00000480104 CILPO75339 1184 aa13.03□□□□□ -0.32
USP11-208ENST00000480104 CHRM1P11229 460 aaPredicted RBP13.03□□□□□ -0.32
USP11-208ENST00000480104 CDC25CP30307 473 aa13.03□□□□□ -0.32
USP11-208ENST00000480104 PTH1RQ03431 593 aa13.03□□□□□ -0.32
USP11-208ENST00000480104 PTPRNQ16849 979 aa13.03□□□□□ -0.32
USP11-208ENST00000480104 C4orf17Q53FE4 359 aa13.03□□□□□ -0.32
USP11-208ENST00000480104 ARHGAP40Q5TG30 622 aa13.03□□□□□ -0.32
USP11-208ENST00000480104 TMPRSS12Q86WS5 348 aa13.03□□□□□ -0.32
USP11-208ENST00000480104 SFTPA1Q8IWL2 248 aa13.03□□□□□ -0.32
USP11-208ENST00000480104 RGL4Q8IZJ4 473 aa13.03□□□□□ -0.32
USP11-208ENST00000480104 IL17RCQ8NAC3 791 aa13.03□□□□□ -0.32
USP11-208ENST00000480104 FGF11Q92914 225 aa13.03□□□□□ -0.32
USP11-208ENST00000480104 FAM124BQ9H5Z6 455 aaPredicted RBP13.03□□□□□ -0.32
USP11-208ENST00000480104 CPNE5Q9HCH3 593 aa13.03□□□□□ -0.32
USP11-208ENST00000480104 TM7SF3Q9NS93 570 aa13.03□□□□□ -0.32
USP11-208ENST00000480104 TDP1Q9NUW8 608 aa13.03□□□□□ -0.32
USP11-208ENST00000480104 SUSD2Q9UGT4 822 aa13.03□□□□□ -0.32
USP11-208ENST00000480104 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.03□□□□□ -0.32
USP11-208ENST00000480104 NUB1Q9Y5A7 615 aa13.03□□□□□ -0.32
USP11-208ENST00000480104 HEMK1Q9Y5R4 338 aaPredicted RBP13.03□□□□□ -0.32
USP11-208ENST00000480104 ESYT2A0FGR8 921 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 N4BP3O15049 544 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 FLRT2O43155 660 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 ZNF883P0CG24 379 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 GLRA2P23416 452 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 YWHABP31946 246 aaKnown RBP13.02□□□□□ -0.33
USP11-208ENST00000480104 LIFRP42702 1097 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 MRPS21P82921 87 aaKnown RBP13.02□□□□□ -0.33
USP11-208ENST00000480104 XKR9Q5GH70 373 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 PPP4R3CPQ6ZMV5 832 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 ITIH5Q86UX2 942 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 MAB21L3Q8N8X9 362 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 ATAD1Q8NBU5 361 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 DDX12PQ92771 950 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 ATP2A3Q93084 1043 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 TMEM176AQ96HP8 235 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 SUSD3Q96L08 255 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 LPIN3Q9BQK8 851 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 MTA3Q9BTC8 594 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 ZMYND12Q9H0C1 365 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 GAREM1Q9H706 876 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 KIF9Q9HAQ2 790 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 DUS2Q9NX74 493 aaKnown RBP13.02□□□□□ -0.33
USP11-208ENST00000480104 WNT6Q9Y6F9 365 aa13.02□□□□□ -0.33
USP11-208ENST00000480104 IGHV1OR15-9A0A0B4J2B8 117 aa13.01□□□□□ -0.33
USP11-208ENST00000480104 SMIM28A0A1B0GU29 152 aa13.01□□□□□ -0.33
USP11-208ENST00000480104 ZBTB39O15060 712 aa13.01□□□□□ -0.33
USP11-208ENST00000480104 TNFSF14O43557 240 aa13.01□□□□□ -0.33
USP11-208ENST00000480104 GNSP15586 552 aa13.01□□□□□ -0.33
USP11-208ENST00000480104 ARL2P36404 184 aa13.01□□□□□ -0.33
USP11-208ENST00000480104 OPRD1P41143 372 aa13.01□□□□□ -0.33
USP11-208ENST00000480104 USP11P51784 963 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms