RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 PSMB7Q99436 277 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 PLVAPQ9BX97 442 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 PARD6BQ9BYG5 372 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 GOLPH3Q9H4A6 298 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 AGO3Q9H9G7 860 aaKnown RBP11.69□□□□□ -0.54
VTI1A-204ENST00000480057 STARD7Q9NQZ5 370 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 ANAPC7Q9UJX3 599 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 PADI3Q9ULW8 664 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 PCDHA3Q9Y5H8 950 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 SNX9Q9Y5X1 595 aa11.69□□□□□ -0.54
VTI1A-204ENST00000480057 A0A0U1RQF3 1178 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 DNM1LO00429 736 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 PTGESO14684 152 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 ATMINO43313 823 aaPredicted RBP11.68□□□□□ -0.54
VTI1A-204ENST00000480057 ATP8B1O43520 1251 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 CEP104O60308 925 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 ERLIN1O75477 346 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 MICAL2O94851 1124 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 RPL9P32969 192 aaKnown RBP11.68□□□□□ -0.54
VTI1A-204ENST00000480057 GABRB2P47870 512 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 PEX5P50542 639 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 SNX16P57768 344 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 C2orf54Q08AI8 447 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 ZNF268Q14587 947 aaPredicted RBP11.68□□□□□ -0.54
VTI1A-204ENST00000480057 GLRA4Q5JXX5 417 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 DENND1BQ6P3S1 775 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 FBXO38Q6PIJ6 1188 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 CRYBG2Q8N1P7 616 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 C1orf131Q8NDD1 294 aaKnown RBP11.68□□□□□ -0.54
VTI1A-204ENST00000480057 SPATA18Q8TC71 538 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 FNIP1Q8TF40 1166 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 TWNKQ96RR1 684 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 CXCL16Q9H2A7 254 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 TRMT13Q9NUP7 481 aaKnown RBP11.68□□□□□ -0.54
VTI1A-204ENST00000480057 KLK14Q9P0G3 267 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 IP6K2Q9UHH9 426 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 TRIM17Q9Y577 477 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 PTCH2Q9Y6C5 1203 aa11.68□□□□□ -0.54
VTI1A-204ENST00000480057 TMEM191CA6NGB0 347 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 PPEF2O14830 753 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 PSTPIP1O43586 416 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 SPOPO43791 374 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 HUS1O60921 280 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 THP07101 528 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 GHRP10912 638 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 CKBP12277 381 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 WARSP23381 471 aaKnown RBP11.67□□□□□ -0.54
VTI1A-204ENST00000480057 CD52P31358 61 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 CDK7P50613 346 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 RWDD2BP57060 319 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 PIGHQ14442 188 aaPredicted RBP11.67□□□□□ -0.54
VTI1A-204ENST00000480057 SOWAHAQ2M3V2 549 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 PPP1R15BQ5SWA1 713 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 ZNF618Q5T7W0 954 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 DNAJC24Q6P3W2 148 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 TRAF7Q6Q0C0 670 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 TMCO3Q6UWJ1 677 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 CHRDL2Q6WN34 429 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 NIPA2Q8N8Q9 360 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 GSTCDQ8NEC7 633 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 APPL2Q8NEU8 664 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 STK32AQ8WU08 396 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 C18orf8Q96DM3 657 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 DDX27Q96GQ7 796 aaKnown RBP11.67□□□□□ -0.54
VTI1A-204ENST00000480057 MS4A14Q96JA4 679 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 RNPC3Q96LT9 517 aaKnown RBP11.67□□□□□ -0.54
VTI1A-204ENST00000480057 HEXIM2Q96MH2 286 aaKnown RBP11.67□□□□□ -0.54
VTI1A-204ENST00000480057 MRPL45Q9BRJ2 306 aaKnown RBP11.67□□□□□ -0.54
VTI1A-204ENST00000480057 SLITRK6Q9H5Y7 841 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 CYLDQ9NQC7 956 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 PAK6Q9NQU5 681 aaPredicted RBP11.67□□□□□ -0.54
VTI1A-204ENST00000480057 HMGXB4Q9UGU5 601 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 PTPN22Q9Y2R2 807 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.67□□□□□ -0.54
VTI1A-204ENST00000480057 SCN1AP35498 2009 aa11.67□□□□□ -0.54
VTI1A-204ENST00000480057 GOLGA6L10A0A0M3HER8 536 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 SIGLEC16A6NMB1 481 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 TMEM110-MUSTN1A8MSY1 372 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 EOMESO95936 686 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 RHOXF2BP0C7M4 288 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 COL6A1P12109 1028 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 TNFRSF8P28908 595 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 GPD2P43304 727 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 DNA2P51530 1060 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 CLCN6P51797 869 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 LILRA4P59901 499 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 SOX4Q06945 474 aaPredicted RBP11.66□□□□□ -0.54
VTI1A-204ENST00000480057 BFSP2Q13515 415 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 PTPN20Q4JDL3 420 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 PKDCCQ504Y2 493 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 SEL1L2Q5TEA6 688 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 LRRC38Q5VT99 294 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 DCAF12L1Q5VU92 463 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 C8orf74Q6P047 294 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 AGMOQ6ZNB7 445 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 TMEM86AQ8N2M4 240 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 IPO4Q8TEX9 1081 aaKnown RBP11.66□□□□□ -0.54
VTI1A-204ENST00000480057 ALG3Q92685 438 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 MCRS1Q96EZ8 462 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 TNIP3Q96KP6 325 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms