RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 AAASQ9NRG9 546 aa20.23■□□□□ 0.83
TNFRSF8-204ENST00000479933 CISHQ9NSE2 258 aa20.23■□□□□ 0.83
TNFRSF8-204ENST00000479933 PCDHGC3Q9UN70 934 aa20.23■□□□□ 0.83
TNFRSF8-204ENST00000479933 R3HDM2Q9Y2K5 976 aaKnown RBP20.23■□□□□ 0.83
TNFRSF8-204ENST00000479933 NEU2Q9Y3R4 380 aa20.23■□□□□ 0.83
TNFRSF8-204ENST00000479933 TTLL13PA6NNM8 815 aa20.22■□□□□ 0.83
TNFRSF8-204ENST00000479933 ABLIM1O14639 778 aa20.22■□□□□ 0.83
TNFRSF8-204ENST00000479933 PEX10O60683 326 aa20.22■□□□□ 0.83
TNFRSF8-204ENST00000479933 TNNC2P02585 160 aa20.22■□□□□ 0.83
TNFRSF8-204ENST00000479933 EIF4BP23588 611 aaKnown RBP20.22■□□□□ 0.83
TNFRSF8-204ENST00000479933 CDH5P33151 784 aaPredicted RBP20.22■□□□□ 0.83
TNFRSF8-204ENST00000479933 DNAJC24Q6P3W2 148 aa20.22■□□□□ 0.83
TNFRSF8-204ENST00000479933 ERO1BQ86YB8 467 aa20.22■□□□□ 0.83
TNFRSF8-204ENST00000479933 EPS8L3Q8TE67 593 aaKnown RBP20.22■□□□□ 0.83
TNFRSF8-204ENST00000479933 SELENOSQ9BQE4 189 aa20.22■□□□□ 0.83
TNFRSF8-204ENST00000479933 ADARB2Q9NS39 739 aaKnown RBP20.22■□□□□ 0.83
TNFRSF8-204ENST00000479933 SMIM23A6NLE4 172 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 ACKR2O00590 384 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 CNMDO75829 334 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 TTC4O95801 387 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 CHN1P15882 459 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 PROZP22891 400 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 RAB27AP51159 221 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 NFX1Q12986 1120 aaKnown RBP20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 PIGHQ14442 188 aaPredicted RBP20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 DRICH1Q6PGQ1 229 aaPredicted RBP20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 EEPD1Q7L9B9 569 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 CPLX4Q7Z7G2 160 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 CNKSR2Q8WXI2 1034 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 ZBTB42B2RXF5 422 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 ASAP2O43150 1006 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 B4GALT4O60513 344 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 TJP3O95049 919 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 LUC7L3O95232 432 aaKnown RBP20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 ANP32DO95626 131 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 PTPN7P35236 360 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 IFI35P80217 286 aaPredicted RBP20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 ZNF699Q32M78 642 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 RELL1Q8IUW5 271 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 ANKRD36BP1Q96IX9 119 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 SMARCAD1Q9H4L7 1026 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 CCDC134Q9H6E4 229 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 DDX56Q9NY93 547 aaKnown RBP20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 BAIAP2L1Q9UHR4 511 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 STRIP2Q9ULQ0 834 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 SH3BP1Q9Y3L3 701 aa20.21■□□□□ 0.83
TNFRSF8-204ENST00000479933 TCRBV5S1A1TA0A578 114 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 CCT8L1PA6NM43 557 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 SOCS7O14512 581 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 NDC80O14777 642 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 TCEA3O75764 348 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 IL18RAPO95256 599 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 ARIH2O95376 493 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 CD58P19256 250 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 MARK3P27448 753 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 SSTR3P32745 418 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 BLMHQ13867 455 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 ZNF268Q14587 947 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 DCUN1D2Q6PH85 259 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 APLFQ8IW19 511 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 UHMK1Q8TAS1 419 aaKnown RBP20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 MDM1Q8TC05 714 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 ADAM7Q9H2U9 754 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 FZD8Q9H461 694 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 PTPRHQ9HD43 1115 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 INTS9Q9NV88 658 aaKnown RBP20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 AGTPBP1Q9UPW5 1226 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 O00370 1275 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 HOXC6P09630 235 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 DRD4P21917 467 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 TFAMQ00059 246 aaKnown RBP20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 KCTD2Q14681 263 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 ATF7IP2Q5U623 682 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 DAB2IPQ5VWQ8 1189 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 HIBCHQ6NVY1 386 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 FAM43BQ6ZT52 329 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 ERICH1Q86X53 443 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 LRRC71Q8N4P6 559 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 NIPA2Q8N8Q9 360 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 OTUD5Q96G74 571 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 SPATA33Q96N06 139 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 ELP3Q9H9T3 547 aa20.2■□□□□ 0.82
TNFRSF8-204ENST00000479933 MED7O43513 233 aa20.19■□□□□ 0.82
TNFRSF8-204ENST00000479933 HBP1O60381 514 aa20.19■□□□□ 0.82
TNFRSF8-204ENST00000479933 CHKAP35790 457 aa20.19■□□□□ 0.82
TNFRSF8-204ENST00000479933 GJC1P36383 396 aa20.19■□□□□ 0.82
TNFRSF8-204ENST00000479933 RPL7AP62424 266 aaKnown RBP20.19■□□□□ 0.82
TNFRSF8-204ENST00000479933 ITIH4Q14624 930 aa20.19■□□□□ 0.82
TNFRSF8-204ENST00000479933 HSDL1Q3SXM5 330 aa20.19■□□□□ 0.82
TNFRSF8-204ENST00000479933 GPAT2Q6NUI2 795 aa20.19■□□□□ 0.82
TNFRSF8-204ENST00000479933 RHPN2Q8IUC4 686 aa20.19■□□□□ 0.82
TNFRSF8-204ENST00000479933 MFN1Q8IWA4 741 aa20.19■□□□□ 0.82
TNFRSF8-204ENST00000479933 CCDC63Q8NA47 563 aa20.19■□□□□ 0.82
TNFRSF8-204ENST00000479933 SPDYE1Q8NFV5 336 aaPredicted RBP20.19■□□□□ 0.82
TNFRSF8-204ENST00000479933 ATXN2LQ8WWM7 1075 aaKnown RBP20.19■□□□□ 0.82
TNFRSF8-204ENST00000479933 ZNF570Q96NI8 536 aa20.19■□□□□ 0.82
TNFRSF8-204ENST00000479933 SLITRK1Q96PX8 696 aa20.19■□□□□ 0.82
TNFRSF8-204ENST00000479933 DDX23Q9BUQ8 820 aaKnown RBP20.19■□□□□ 0.82
TNFRSF8-204ENST00000479933 SLC5A4Q9NY91 659 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms