RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 MTRRQ9UBK8 725 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 CDH9Q9ULB4 789 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 COLQQ9Y215 455 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 SSX2IPQ9Y2D8 614 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 PCDHB4Q9Y5E5 795 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 TIMM13Q9Y5L4 95 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 BACE2Q9Y5Z0 518 aa13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 LAMA2P24043 3122 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-218ENST00000479897 PATJQ8NI35 1801 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 OR6C75A6NL08 312 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 AKR1B15C9JRZ8 316 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 FSCN2O14926 492 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 CCDC172P0C7W6 258 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 FERP16591 822 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 FECHP22830 423 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 GNL1P36915 607 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 RAD23BP54727 409 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 GSDMDP57764 484 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 BPIFB4P59827 614 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 PTPN14Q15678 1187 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 MEA1Q16626 185 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 INTS6LQ5JSJ4 861 aaKnown RBP13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 E4F1Q66K89 784 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 SLC8B1Q6J4K2 584 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 TAS1R1Q7RTX1 841 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 DRC7Q8IY82 874 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 VPS52Q8N1B4 723 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 THEM5Q8N1Q8 247 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 SLC4A11Q8NBS3 891 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 OR6B3Q8NGW1 331 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 LNX1Q8TBB1 728 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 SPPL3Q8TCT6 385 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 TMEM176AQ96HP8 235 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 PKMYT1Q99640 499 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 ELOVL4Q9GZR5 314 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 ABHD10Q9NUJ1 306 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 FNIP2Q9P278 1114 aa13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 PUF60Q9UHX1 559 aaKnown RBP13.37□□□□□ -0.27
TRAPPC12-218ENST00000479897 A8MXQ7 604 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 LILRB3O75022 631 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 PNMA6AP0CW24 399 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 KRT5P13647 590 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 LMO2P25791 158 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 CLCN1P35523 988 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 TSPY1Q01534 308 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 PSMD5Q16401 504 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 CTXN3Q4LDR2 81 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 SFMBT2Q5VUG0 894 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 PDE12Q6L8Q7 609 aaKnown RBP13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 CEP57Q86XR8 500 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 ZNF677Q86XU0 584 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 B3GALNT2Q8NCR0 500 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 OR8K1Q8NGG5 319 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 OR10T2Q8NGX3 314 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 EPS8L1Q8TE68 723 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 RIN2Q8WYP3 895 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 B3GALT6Q96L58 329 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 PANX2Q96RD6 677 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 SYT15Q9BQS2 421 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 RXFP1Q9HBX9 757 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 TLR9Q9NR96 1032 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 KIAA1257Q9ULG3 409 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 CHD7Q9P2D1 2997 aa13.36□□□□□ -0.27
TRAPPC12-218ENST00000479897 CYP26A1O43174 497 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 GFPT2O94808 682 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 VDRP11473 427 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 GNA15P30679 374 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 PDE6CP51160 858 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 ADKP55263 362 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 CDK17Q00537 523 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 PTK2Q05397 1052 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 CCDC173Q0VFZ6 552 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 SMARCB1Q12824 385 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 GPM6BQ13491 265 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 CAMK1Q14012 370 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 BMS1Q14692 1282 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 STILQ15468 1287 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 MAPRE1Q15691 268 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 ASIC2Q16515 512 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 HGSNATQ68CP4 663 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 ARHGAP17Q68EM7 881 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 KIAA1841Q6NSI8 718 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 FAM171BQ6P995 826 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 IRF2BP2Q7Z5L9 587 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 SPC24Q8NBT2 197 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 CPLX3Q8WVH0 158 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 POF1BQ8WVV4 589 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 PPP1R9BQ96SB3 815 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 SYT11Q9BT88 431 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 ZCWPW1Q9H0M4 648 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 DPEP3Q9H4B8 488 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 ALG13Q9NP73 1137 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 NGRNQ9NPE2 291 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 CRTAC1Q9NQ79 661 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 MRPL17Q9NRX2 175 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 NOCTQ9UK39 431 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 MTUS1Q9ULD2 1270 aa13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 BZW2Q9Y6E2 419 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-218ENST00000479897 PLXNA3P51805 1871 aa13.34□□□□□ -0.27
TRAPPC12-218ENST00000479897 GRM6O15303 877 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms