RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 FAM200AQ8TCP9 573 aa16.19■□□□□ 0.18
PRKN-207ENST00000479615 MSANTD3Q96H12 275 aa16.19■□□□□ 0.18
PRKN-207ENST00000479615 GCNAQ96QF7 691 aa16.19■□□□□ 0.18
PRKN-207ENST00000479615 FNBP1Q96RU3 617 aa16.19■□□□□ 0.18
PRKN-207ENST00000479615 SEPT5Q99719 369 aaPredicted RBP16.19■□□□□ 0.18
PRKN-207ENST00000479615 CRISPLD1Q9H336 500 aa16.19■□□□□ 0.18
PRKN-207ENST00000479615 AGPAT3Q9NRZ7 376 aa16.19■□□□□ 0.18
PRKN-207ENST00000479615 OBP2AQ9NY56 170 aa16.19■□□□□ 0.18
PRKN-207ENST00000479615 A0A1W2PRU2 124 aa16.18■□□□□ 0.18
PRKN-207ENST00000479615 TGFB1I1O43294 461 aa16.18■□□□□ 0.18
PRKN-207ENST00000479615 KIF20AO95235 890 aa16.18■□□□□ 0.18
PRKN-207ENST00000479615 HAPLN1P10915 354 aaPredicted RBP16.18■□□□□ 0.18
PRKN-207ENST00000479615 HOXD13P35453 343 aa16.18■□□□□ 0.18
PRKN-207ENST00000479615 RPL10AP62906 217 aaKnown RBP16.18■□□□□ 0.18
PRKN-207ENST00000479615 BFSP1Q12934 665 aa16.18■□□□□ 0.18
PRKN-207ENST00000479615 PKP1Q13835 747 aa16.18■□□□□ 0.18
PRKN-207ENST00000479615 TEAD2Q15562 447 aa16.18■□□□□ 0.18
PRKN-207ENST00000479615 SNRNP35Q16560 246 aaKnown RBP16.18■□□□□ 0.18
PRKN-207ENST00000479615 KNOP1Q1ED39 458 aaKnown RBP16.18■□□□□ 0.18
PRKN-207ENST00000479615 TMEM174Q8WUU8 243 aa16.18■□□□□ 0.18
PRKN-207ENST00000479615 SCFD1Q8WVM8 642 aa16.18■□□□□ 0.18
PRKN-207ENST00000479615 HPS3Q969F9 1004 aa16.18■□□□□ 0.18
PRKN-207ENST00000479615 SPATA32Q96LK8 384 aa16.18■□□□□ 0.18
PRKN-207ENST00000479615 TMEM209Q96SK2 561 aa16.18■□□□□ 0.18
PRKN-207ENST00000479615 MTMR12Q9C0I1 747 aa16.18■□□□□ 0.18
PRKN-207ENST00000479615 SCAND2PQ9GZW5 306 aaPredicted RBP16.18■□□□□ 0.18
PRKN-207ENST00000479615 ATXN3LQ9H3M9 355 aa16.18■□□□□ 0.18
PRKN-207ENST00000479615 DDX43Q9NXZ2 648 aaKnown RBP16.18■□□□□ 0.18
PRKN-207ENST00000479615 DLGAP2Q9P1A6 1054 aa16.18■□□□□ 0.18
PRKN-207ENST00000479615 SNX9Q9Y5X1 595 aa16.18■□□□□ 0.18
PRKN-207ENST00000479615 WDFY4Q6ZS81 3184 aa16.18■□□□□ 0.18
PRKN-207ENST00000479615 NOTCH4Q99466 2003 aa16.18■□□□□ 0.18
PRKN-207ENST00000479615 FAM170BA6NMN3 283 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 ZNF263O14978 683 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 CSH1P0DML2 217 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 CSH2P0DML3 217 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 DDX6P26196 483 aaKnown RBP eCLIP16.17■□□□□ 0.18
PRKN-207ENST00000479615 AFMP43652 599 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 AP3M2P53677 418 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 WNT7BP56706 349 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 PSMD6Q15008 389 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 MAPRE1Q15691 268 aaKnown RBP16.17■□□□□ 0.18
PRKN-207ENST00000479615 ZC3H14Q6PJT7 736 aaKnown RBP16.17■□□□□ 0.18
PRKN-207ENST00000479615 LRRTM3Q86VH5 581 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 CBWD2Q8IUF1 395 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 C1orf210Q8IVY1 113 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 YAF2Q8IY57 180 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 SPRYD3Q8NCJ5 442 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 GLIS3Q8NEA6 775 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 ZSWIM2Q8NEG5 633 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 ST13P5Q8NFI4 369 aaPredicted RBP16.17■□□□□ 0.18
PRKN-207ENST00000479615 CCDC34Q96HJ3 373 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 FUBP3Q96I24 572 aaKnown RBP eCLIP16.17■□□□□ 0.18
PRKN-207ENST00000479615 HPDLQ96IR7 371 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 CEP295NLQ96MC4 621 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 ZSWIM3Q96MP5 696 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 IER2Q9BTL4 223 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 PLA2G2FQ9BZM2 168 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 BLZF1Q9H2G9 400 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 TASP1Q9H6P5 420 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 LTB4R2Q9NPC1 389 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 ABI2Q9NYB9 513 aaPredicted RBP16.17■□□□□ 0.18
PRKN-207ENST00000479615 UXTQ9UBK9 157 aaPredicted RBP16.17■□□□□ 0.18
PRKN-207ENST00000479615 SIX4Q9UIU6 781 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 L1RE1Q9UN81 338 aa16.17■□□□□ 0.18
PRKN-207ENST00000479615 DOCK6Q96HP0 2047 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 HEPACAM2A8MVW5 462 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 DPYSL4O14531 572 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 GABRDO14764 452 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 GFRA3O60609 400 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 DCNP07585 359 aaKnown RBP16.16■□□□□ 0.18
PRKN-207ENST00000479615 TNNI1P19237 187 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 GABRR2P28476 465 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 RPS9P46781 194 aaKnown RBP16.16■□□□□ 0.18
PRKN-207ENST00000479615 CUL4BQ13620 913 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 UBXN2BQ14CS0 331 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 CFAP221Q4G0U5 840 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 INTS6LQ5JSJ4 861 aaKnown RBP16.16■□□□□ 0.18
PRKN-207ENST00000479615 VITQ6UXI7 678 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 C4orf50Q6ZRC1 276 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 TPRG1Q6ZUI0 275 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 GAREM2Q75VX8 874 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 LIMS2Q7Z4I7 341 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 ADGRF2Q8IZF7 708 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 NKD2Q969F2 451 aaPredicted RBP16.16■□□□□ 0.18
PRKN-207ENST00000479615 CCDC47Q96A33 483 aaKnown RBP16.16■□□□□ 0.18
PRKN-207ENST00000479615 CLDN23Q96B33 292 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 PAGE5Q96GU1 130 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 PHOX2BQ99453 314 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 ZNF334Q9HCZ1 680 aaPredicted RBP16.16■□□□□ 0.18
PRKN-207ENST00000479615 EXOC1Q9NV70 894 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 FAM86C1Q9NVL1 165 aa16.16■□□□□ 0.18
PRKN-207ENST00000479615 CHADO15335 359 aa16.15■□□□□ 0.18
PRKN-207ENST00000479615 ACTN4O43707 911 aaKnown RBP16.15■□□□□ 0.18
PRKN-207ENST00000479615 EXOC3O60645 756 aa16.15■□□□□ 0.18
PRKN-207ENST00000479615 GJA1P17302 382 aa16.15■□□□□ 0.18
PRKN-207ENST00000479615 GDI1P31150 447 aa16.15■□□□□ 0.18
PRKN-207ENST00000479615 ATICP31939 592 aa16.15■□□□□ 0.18
PRKN-207ENST00000479615 PLCB2Q00722 1185 aa16.15■□□□□ 0.18
PRKN-207ENST00000479615 CYP24A1Q07973 514 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms