RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 IFIH1Q9BYX4 1025 aaKnown RBP6.75□□□□□ -1.33
SF3B1-209ENST00000479532 TRIM9Q9C026 710 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 NRSN2Q9GZP1 204 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 WNT8AQ9H1J5 351 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 ADAMTS10Q9H324 1103 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 MRPL44Q9H9J2 332 aaKnown RBP6.75□□□□□ -1.33
SF3B1-209ENST00000479532 OSGEPQ9NPF4 335 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 LMBRD1Q9NUN5 540 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 PRMT7Q9NVM4 692 aaPredicted RBP6.75□□□□□ -1.33
SF3B1-209ENST00000479532 DACT1Q9NYF0 836 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 EXOC7Q9UPT5 735 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 BRCA2P51587 3418 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 SIP14410 1827 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 UMODL1Q5DID0 1318 aa6.75□□□□□ -1.33
SF3B1-209ENST00000479532 SCN5AQ14524 2016 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 HMX2A2RU54 273 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 DENND3A2RUS2 1198 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 SLC16A4O15374 487 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 EIF4EBP3O60516 100 aaPredicted RBP6.74□□□□□ -1.33
SF3B1-209ENST00000479532 CILPO75339 1184 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 BAIAP3O94812 1187 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 GCNT3O95395 438 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 BPNT1O95861 308 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 FGBP02675 491 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 CXCL10P02778 98 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 RPN1P04843 607 aaKnown RBP6.74□□□□□ -1.33
SF3B1-209ENST00000479532 CYP11A1P05108 521 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 PRKCBP05771 671 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 CSF2RAP15509 400 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 JUNBP17275 347 aaPredicted RBP6.74□□□□□ -1.33
SF3B1-209ENST00000479532 MAOBP27338 520 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 CD52P31358 61 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 NPTX2P47972 431 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 KCNJ6P48051 423 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 ZNF131P52739 623 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 NCKAP1LP55160 1127 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 COASYQ13057 564 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 MAPK7Q13164 816 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 PRPF4BQ13523 1007 aaKnown RBP6.74□□□□□ -1.33
SF3B1-209ENST00000479532 SNW1Q13573 536 aaKnown RBP6.74□□□□□ -1.33
SF3B1-209ENST00000479532 CUL4BQ13620 913 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 LPIN1Q14693 890 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 POU4F3Q15319 338 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 PLEKHG4Q58EX7 1191 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 CDCA2Q69YH5 1023 aaPredicted RBP6.74□□□□□ -1.33
SF3B1-209ENST00000479532 Q6ZS46 218 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 FAM228AQ86W67 206 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 SFR1Q86XK3 245 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 GRAMD1CQ8IYS0 662 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 HACE1Q8IYU2 909 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 DAW1Q8N136 415 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 ENGASEQ8NFI3 743 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 LRRC15Q8TF66 581 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 ANKRD7Q92527 254 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 SMARCE1Q969G3 411 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 UTP4Q969X6 686 aaKnown RBP6.74□□□□□ -1.33
SF3B1-209ENST00000479532 HVCN1Q96D96 273 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 DNAJC19Q96DA6 116 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 CCDC51Q96ER9 411 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 KLHDC7BQ96G42 594 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 ZNF668Q96K58 619 aaPredicted RBP6.74□□□□□ -1.33
SF3B1-209ENST00000479532 CORO1BQ9BR76 489 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 ADPGKQ9BRR6 497 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 CEP41Q9BYV8 373 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 TRIM6Q9C030 488 aaPredicted RBP6.74□□□□□ -1.33
SF3B1-209ENST00000479532 BLZF1Q9H2G9 400 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 IFT122Q9HBG6 1241 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 CHST12Q9NRB3 414 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 OLFML3Q9NRN5 406 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 C1orf112Q9NSG2 853 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 STRIP2Q9ULQ0 834 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 PADI3Q9ULW8 664 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 ST3GAL5Q9UNP4 418 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 PIN4Q9Y237 131 aaKnown RBP6.74□□□□□ -1.33
SF3B1-209ENST00000479532 NOC2LQ9Y3T9 749 aaKnown RBP6.74□□□□□ -1.33
SF3B1-209ENST00000479532 UBE4BO95155 1302 aa6.74□□□□□ -1.33
SF3B1-209ENST00000479532 ABHD14A-ACY1A0A1B0GW23 586 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 FRMD3A2A2Y4 597 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 H0YGN5 161 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 ACKR2O00590 384 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 N4BP3O15049 544 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 EIF3DO15371 548 aaKnown RBP eCLIP6.73□□□□□ -1.333e-7■□□□□ 8.4
SF3B1-209ENST00000479532 NBNO60934 754 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 AMHP03971 560 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 TPM3P06753 285 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 STAG3L1P0CL83 205 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 ITGB8P26012 769 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 PPP1R2P41236 205 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 MATR3P43243 847 aaKnown RBP eCLIP6.73□□□□□ -1.33
SF3B1-209ENST00000479532 MAGEA10P43363 369 aaPredicted RBP6.73□□□□□ -1.33
SF3B1-209ENST00000479532 LIG4P49917 911 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 RAB27AP51159 221 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 NLRP12P59046 1061 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 MBTD1Q05BQ5 628 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 STIM1Q13586 685 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 KCNB1Q14721 858 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 SETDB1Q15047 1291 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 ZNF124Q15973 351 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 FAM187BQ17R55 369 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 FAM26FQ5R3K3 315 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms