RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 ERVK-9P63128 1117 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 SATB1Q01826 763 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 CNTN2Q02246 1040 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 MTM1Q13496 603 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 C4orf33Q8N1A6 199 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 SERPINI1Q99574 410 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 MROH8Q9H579 483 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 CISHQ9NSE2 258 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 CASZ1Q86V15 1759 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 CD4P01730 458 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 GPD1P21695 349 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 RANBP1P43487 201 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 SLC26A2P50443 739 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 LRRC31Q6UY01 552 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 ABRAQ8N0Z2 381 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 IL31RAQ8NI17 732 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 ELMO3Q96BJ8 720 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 SEC16BQ96JE7 1060 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 PARK7Q99497 189 aaKnown RBP15.02■□□□□ -0
COL20A1-206ENST00000479501 CFAP69A5D8W1 941 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 FAM47DPA6NHR8 397 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 CETPP11597 493 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 KRT10P13645 584 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 PTPRAP18433 802 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 PPM1FP49593 454 aaPredicted RBP15.02■□□□□ -0
COL20A1-206ENST00000479501 ART3Q13508 389 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 TAF1CQ15572 869 aaPredicted RBP15.02■□□□□ -0
COL20A1-206ENST00000479501 DGKDQ16760 1214 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 TAF1BQ53T94 588 aaPredicted RBP15.02■□□□□ -0
COL20A1-206ENST00000479501 WDR49Q8IV35 697 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 DCLK2Q8N568 766 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 KAT5Q92993 513 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 HDAC11Q96DB2 347 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 FGD4Q96M96 766 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 ZNF518BQ9C0D4 1074 aa15.02■□□□□ -0
COL20A1-206ENST00000479501 XPO7Q9UIA9 1087 aaKnown RBP15.02■□□□□ -0
COL20A1-206ENST00000479501 TGFB1I1O43294 461 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 DLG4P78352 724 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 BMT2Q1RMZ1 405 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 SLC30A9Q6PML9 568 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 C3orf62Q6ZUJ4 267 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 SLC9A9Q8IVB4 645 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 MCOLN2Q8IZK6 566 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 AENQ8WTP8 325 aaKnown RBP15.02□□□□□ -0.01
COL20A1-206ENST00000479501 SIK2Q9H0K1 926 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 TMBIM4Q9HC24 238 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 ARL2BPQ9Y2Y0 163 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 LRRC37A3O60309 1634 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 ADAMTS3O15072 1205 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 ARFIP2P53365 341 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 AMPD2Q01433 879 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 ZNF484Q5JVG2 852 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 NOP9Q86U38 636 aaKnown RBP15.02□□□□□ -0.01
COL20A1-206ENST00000479501 NUDCD3Q8IVD9 361 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 VPS39Q96JC1 886 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 MED15Q96RN5 788 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 FGFBP2Q9BYJ0 223 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 PSMC3IPQ9P2W1 217 aaPredicted RBP15.02□□□□□ -0.01
COL20A1-206ENST00000479501 VAV3Q9UKW4 847 aa15.02□□□□□ -0.01
COL20A1-206ENST00000479501 RRN3P2A6NIE6 340 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 GTF2BQ00403 316 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 CCDC138Q96M89 665 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 PPCSQ9HAB8 311 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 SLC4A7Q9Y6M7 1214 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 C6orf222P0C671 652 aaPredicted RBP15.01□□□□□ -0.01
COL20A1-206ENST00000479501 FAM153BP0C7A2 387 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 EEF1B2P24534 225 aaKnown RBP15.01□□□□□ -0.01
COL20A1-206ENST00000479501 SESN2P58004 480 aaPredicted RBP15.01□□□□□ -0.01
COL20A1-206ENST00000479501 LAMTOR4Q0VGL1 99 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 ARHGEF6Q15052 776 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 FAM153CQ494X1 144 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 BOLA3Q53S33 107 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 FAM161BQ96MY7 647 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 SLC40A1Q9NP59 571 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 ZC3H7BQ9UGR2 993 aaKnown RBP15.01□□□□□ -0.01
COL20A1-206ENST00000479501 FAM153AQ9UHL3 310 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 CHMP2BQ9UQN3 213 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 IGKV6D-41A0A0C4DH26 115 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 PPP1R12AO14974 1030 aaPredicted RBP15.01□□□□□ -0.01
COL20A1-206ENST00000479501 HSPA4LO95757 839 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 MARSP56192 900 aaKnown RBP15.01□□□□□ -0.01
COL20A1-206ENST00000479501 DEUP1Q05D60 604 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 ORC1Q13415 861 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 ZNF606Q8WXB4 792 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 SERPINB12Q96P63 405 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 SMYD3Q9H7B4 428 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 ALG13Q9NP73 1137 aaKnown RBP15.01□□□□□ -0.01
COL20A1-206ENST00000479501 PAK5Q9P286 719 aa15.01□□□□□ -0.01
COL20A1-206ENST00000479501 USP15Q9Y4E8 981 aaPredicted RBP15.01□□□□□ -0.01
COL20A1-206ENST00000479501 NPTXRO95502 500 aa15□□□□□ -0.01
COL20A1-206ENST00000479501 LY6KQ17RY6 165 aa15□□□□□ -0.01
COL20A1-206ENST00000479501 CCDC60Q8IWA6 550 aaPredicted RBP15□□□□□ -0.01
COL20A1-206ENST00000479501 ARHGAP18Q8N392 663 aa15□□□□□ -0.01
COL20A1-206ENST00000479501 WHRNQ9P202 907 aa15□□□□□ -0.01
COL20A1-206ENST00000479501 BAG5Q9UL15 447 aa15□□□□□ -0.01
COL20A1-206ENST00000479501 COL14A1Q05707 1796 aaKnown RBP15□□□□□ -0.01
COL20A1-206ENST00000479501 SMAPO00193 183 aa15□□□□□ -0.01
COL20A1-206ENST00000479501 PYGMP11217 842 aa15□□□□□ -0.01
COL20A1-206ENST00000479501 EPHB1P54762 984 aa15□□□□□ -0.01
COL20A1-206ENST00000479501 STX1BP61266 288 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms