RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 C1GALT1C1Q96EU7 318 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 MRGPRX4Q96LA9 322 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 CDK5RAP1Q96SZ6 601 aaKnown RBP6.35□□□□□ -1.39
CCDC171-207ENST00000478913 CPEB1Q9BZB8 566 aaKnown RBP6.35□□□□□ -1.39
CCDC171-207ENST00000478913 EPHX3Q9H6B9 360 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 KMT5AQ9NQR1 393 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 MAN1C1Q9NR34 630 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 RRP7BPQ9NSQ0 103 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 GOLGA6AQ9NYA3 693 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 CALCOCO1Q9P1Z2 691 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 POLHQ9Y253 713 aa6.35□□□□□ -1.39
CCDC171-207ENST00000478913 TTC21AQ8NDW8 1320 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 CFAP47Q6ZTR5 3102 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 GOLGA6L6A8MZA4 724 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 SLC16A6O15403 523 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 MARCH6O60337 910 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 MAN2A2P49641 1150 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 ZNF280AP59817 542 aaPredicted RBP6.34□□□□□ -1.39
CCDC171-207ENST00000478913 TLE1Q04724 770 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 EFEMP1Q12805 493 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 SPATS1Q496A3 300 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 CCDC157Q569K6 752 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 ATXN7L2Q5T6C5 722 aaPredicted RBP6.34□□□□□ -1.39
CCDC171-207ENST00000478913 EFCAB12Q6NXP0 572 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 ZNF529Q6P280 563 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 B3GNT9Q6UX72 402 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 Q6ZRM9 215 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 GPRIN1Q7Z2K8 1008 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 PALM2Q8IXS6 379 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 RNF169Q8NCN4 708 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 C3orf20Q8ND61 904 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 SLC35G2Q8TBE7 412 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 DVL3Q92997 716 aaPredicted RBP6.34□□□□□ -1.39
CCDC171-207ENST00000478913 PGBD4Q96DM1 585 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 TAAR9Q96RI9 348 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 MYOCQ99972 504 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 VRK1Q99986 396 aaPredicted RBP6.34□□□□□ -1.39
CCDC171-207ENST00000478913 GPR87Q9BY21 358 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 C11orf54Q9H0W9 315 aaPredicted RBP6.34□□□□□ -1.39
CCDC171-207ENST00000478913 POGKQ9P215 609 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 NR2E3Q9Y5X4 410 aa6.34□□□□□ -1.39
CCDC171-207ENST00000478913 COL5A2P05997 1499 aaPredicted RBP6.34□□□□□ -1.4
CCDC171-207ENST00000478913 NHSQ6T4R5 1651 aa6.33□□□□□ -1.4
CCDC171-207ENST00000478913 TRPM1Q7Z4N2 1603 aa6.33□□□□□ -1.4
CCDC171-207ENST00000478913 ARIH2O95376 493 aa6.33□□□□□ -1.4
CCDC171-207ENST00000478913 ITGB8P26012 769 aa6.33□□□□□ -1.4
CCDC171-207ENST00000478913 MGAT1P26572 445 aa6.33□□□□□ -1.4
CCDC171-207ENST00000478913 MAP2K6P52564 334 aa6.33□□□□□ -1.4
CCDC171-207ENST00000478913 RABGGTBP53611 331 aa6.33□□□□□ -1.4
CCDC171-207ENST00000478913 KRTAP10-2P60368 255 aa6.33□□□□□ -1.4
CCDC171-207ENST00000478913 CNGB1Q14028 1251 aaPredicted RBP6.33□□□□□ -1.4
CCDC171-207ENST00000478913 GFOD2Q3B7J2 385 aa6.33□□□□□ -1.4
CCDC171-207ENST00000478913 KHDC1Q4VXA5 237 aaKnown RBP6.33□□□□□ -1.4
CCDC171-207ENST00000478913 DENND1CQ8IV53 801 aa6.33□□□□□ -1.4
CCDC171-207ENST00000478913 DCBLD1Q8N8Z6 715 aa6.33□□□□□ -1.4
CCDC171-207ENST00000478913 OR10H5Q8NGA6 315 aa6.33□□□□□ -1.4
CCDC171-207ENST00000478913 DMRTA2Q96SC8 542 aa6.33□□□□□ -1.4
CCDC171-207ENST00000478913 MNTQ99583 582 aa6.33□□□□□ -1.4
CCDC171-207ENST00000478913 SLC23A1Q9UHI7 598 aa6.33□□□□□ -1.4
CCDC171-207ENST00000478913 CFAP54Q96N23 3096 aa6.33□□□□□ -1.4
CCDC171-207ENST00000478913 BTAF1O14981 1849 aa6.32□□□□□ -1.4
CCDC171-207ENST00000478913 LRRC14BA6NHZ5 514 aa6.32□□□□□ -1.4
CCDC171-207ENST00000478913 ERC2O15083 957 aa6.32□□□□□ -1.4
CCDC171-207ENST00000478913 KIAA0391O15091 583 aaKnown RBP6.32□□□□□ -1.4
CCDC171-207ENST00000478913 POMCP01189 267 aa6.32□□□□□ -1.4
CCDC171-207ENST00000478913 CD1AP06126 327 aa6.32□□□□□ -1.4
CCDC171-207ENST00000478913 ADAM17P78536 824 aa6.32□□□□□ -1.4
CCDC171-207ENST00000478913 SLC4A8Q2Y0W8 1093 aa6.32□□□□□ -1.4
CCDC171-207ENST00000478913 C1QL3Q5VWW1 255 aa6.32□□□□□ -1.4
CCDC171-207ENST00000478913 DRICH1Q6PGQ1 229 aaPredicted RBP6.32□□□□□ -1.4
CCDC171-207ENST00000478913 UBE3BQ7Z3V4 1068 aa6.32□□□□□ -1.4
CCDC171-207ENST00000478913 C14orf80Q86SX3 495 aa6.32□□□□□ -1.4
CCDC171-207ENST00000478913 TTC8Q8TAM2 541 aa6.32□□□□□ -1.4
CCDC171-207ENST00000478913 CDX2Q99626 313 aaPredicted RBP6.32□□□□□ -1.4
CCDC171-207ENST00000478913 PCDHA3Q9Y5H8 950 aa6.32□□□□□ -1.4
CCDC171-207ENST00000478913 KIAA1551Q9HCM1 1747 aa6.32□□□□□ -1.4
CCDC171-207ENST00000478913 PAPPA2Q9BXP8 1791 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 ANKRD11Q6UB99 2663 aaPredicted RBP6.31□□□□□ -1.4
CCDC171-207ENST00000478913 TCRBV7S2A1N4TA0A589 114 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 KRTAP23-1A1A580 65 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 KLRG2A4D1S0 409 aaPredicted RBP6.31□□□□□ -1.4
CCDC171-207ENST00000478913 VSTM5A8MXK1 200 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 H3BML4 177 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 GRM6O15303 877 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 CTNND1O60716 968 aaKnown RBP6.31□□□□□ -1.4
CCDC171-207ENST00000478913 AMHP03971 560 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 ALDH2P05091 517 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 MTHFD1P11586 935 aaKnown RBP6.31□□□□□ -1.4
CCDC171-207ENST00000478913 ALAS1P13196 640 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 ZNF20P17024 532 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 MALP21145 153 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 ACRV1P26436 265 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 SMARCA1P28370 1054 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 IL12RB1P42701 662 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 SCNN1GP51170 649 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 HK3P52790 923 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 RRP1BQ14684 758 aaKnown RBP6.31□□□□□ -1.4
CCDC171-207ENST00000478913 LRIT3Q3SXY7 679 aa6.31□□□□□ -1.4
CCDC171-207ENST00000478913 PABPC1LQ4VXU2 614 aaKnown RBP6.31□□□□□ -1.4
CCDC171-207ENST00000478913 ARHGAP29Q52LW3 1261 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms