RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-212ENST00000478573 CEP170Q5SW79 1584 aa5.08□□□□□ -1.6
CDC42BPA-212ENST00000478573 MYBBP1AQ9BQG0 1328 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 TPP1O14773 563 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 SLC16A6O15403 523 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 RBMXL2O75526 392 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 C1QL1O75973 258 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 UBXN7O94888 489 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 AMY1AP04745 511 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 ALDH2P05091 517 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 RHCEP18577 417 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 DDCP20711 480 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 ABCG1P45844 678 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 RHDQ02161 417 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 IL10RAQ13651 578 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 ATP2B3Q16720 1220 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 EPHA10Q5JZY3 1008 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 THEMIS2Q5TEJ8 643 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 TTC7BQ86TV6 843 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 RHOT1Q8IXI2 618 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 KIAA0319LQ8IZA0 1049 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 LNX2Q8N448 690 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 CAMKK1Q8N5S9 505 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 SAMD3Q8N6K7 520 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 DPF2Q92785 391 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 RAB24Q969Q5 203 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 CYFIP2Q96F07 1278 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 PDLIM2Q96JY6 352 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 KMT5AQ9NQR1 393 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 CHST12Q9NRB3 414 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 CDYLQ9Y232 598 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 GRIN2AQ12879 1464 aa5.07□□□□□ -1.6
CDC42BPA-212ENST00000478573 INO80B-WBP1J3KQ70 363 aa5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 YY2O15391 372 aa5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 ORC4O43929 436 aa5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 PEX14O75381 377 aa5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 FCER1AP12319 257 aa5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 AGFG1P52594 562 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 CDC42EP1Q00587 391 aa5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 SLFN5Q08AF3 891 aa5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 SAFBQ15424 915 aaKnown RBP eCLIP5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 C11orf96Q7Z7L8 435 aa5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 PPP1R35Q8TAP8 253 aa5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 PMM1Q92871 262 aa5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 FBXL20Q96IG2 436 aa5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 MED15Q96RN5 788 aa5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 CGRRF1Q99675 332 aa5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 SLC29A3Q9BZD2 475 aa5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 INO80BQ9C086 356 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 C11orf54Q9H0W9 315 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 CPNE5Q9HCH3 593 aa5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 RNF7Q9UBF6 113 aa5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 PCDHB1Q9Y5F3 818 aa5.06□□□□□ -1.6
CDC42BPA-212ENST00000478573 HTR1BP28222 390 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 FOLR3P41439 243 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 FAM193AP78312 1265 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 NHLH1Q02575 133 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 FOXF2Q12947 444 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 BIRC2Q13490 618 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 PREPLQ4J6C6 727 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 ANO6Q4KMQ2 910 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 SYCP2LQ5T4T6 812 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 PAPD7Q5XG87 772 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 KAZNQ674X7 775 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 PPP4R4Q6NUP7 873 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 TFAP2BQ92481 460 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 KAT5Q92993 513 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 RGMAQ96B86 450 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 MRGPRX4Q96LA9 322 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 UROC1Q96N76 676 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 RPS6KC1Q96S38 1066 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 TLR10Q9BXR5 811 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 WDR26Q9H7D7 661 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 L1RE1Q9UN81 338 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 STXBP5LQ9Y2K9 1186 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 PCDHA13Q9Y5I0 950 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 NUP160Q12769 1436 aa5.05□□□□□ -1.6
CDC42BPA-212ENST00000478573 APAF1O14727 1248 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 HAUS5O94927 633 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 ERBB2P04626 1255 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 NBPF7P0C2Y1 421 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 MAP2K6P52564 334 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 HK3P52790 923 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 MAPK10P53779 464 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 SRSF4Q08170 494 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 PICALMQ13492 652 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 RAB39AQ14964 217 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 COBLL1Q53SF7 1204 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 TSTD2Q5T7W7 516 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 NPNTQ6UXI9 565 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 TSHZ1Q6ZSZ6 1077 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 GRASPQ7Z6J2 395 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 PEG10Q86TG7 708 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 RSPH3Q86UC2 560 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 SRRM1Q8IYB3 904 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 TOR1AIP2Q8NFQ8 470 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 NLGN4YQ8NFZ3 816 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 SLC30A5Q8TAD4 765 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 CDK5RAP3Q96JB5 506 aa5.04□□□□□ -1.6
CDC42BPA-212ENST00000478573 TMX3Q96JJ7 454 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms