RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 NOL8Q76FK4 1167 aaKnown RBP4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 ADGRG5Q8IZF4 528 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 FUBP1Q96AE4 644 aaKnown RBP4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 MOGAT1Q96PD6 335 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 HEPHQ9BQS7 1158 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 SPATA5L1Q9BVQ7 753 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 DPH1Q9BZG8 443 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 NUP62CLQ9H1M0 184 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 SERHL2Q9H4I8 314 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 UNKLQ9H9P5 680 aaKnown RBP4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 ZNF287Q9HBT7 754 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 TBCCD1Q9NVR7 557 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 MRPS18AQ9NVS2 196 aaKnown RBP4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 HESX1Q9UBX0 185 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 TESQ9UGI8 421 aaKnown RBP4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 OGDHLQ9ULD0 1010 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 FAM50BQ9Y247 325 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 TMX2Q9Y320 296 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 PAXBP1Q9Y5B6 917 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 HS3ST3A1Q9Y663 406 aa4.87□□□□□ -1.63
SMARCA1-204ENST00000478420 MAP4K4O95819 1239 aaPredicted RBP4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 MYL1P05976 194 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 ITGAMP11215 1152 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 ITGALP20701 1170 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 SLC11A2P49281 568 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 SUMO3P55854 103 aaPredicted RBP4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 UCP3P55916 312 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 ZXDAP98168 799 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 SLC13A2Q13183 592 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 IQCB1Q15051 598 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 CNGA2Q16280 664 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 LONRF3Q496Y0 759 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 ABHD17BQ5VST6 288 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 TMPRSS9Q7Z410 1059 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 GPR149Q86SP6 731 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 Q8N1X5 172 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 LCORLQ8N3X6 602 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 SLC15A4Q8N697 577 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 DNAJC5GQ8N7S2 189 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 PJA1Q8NG27 643 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 PTCD3Q96EY7 689 aaKnown RBP4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 WDR11Q9BZH6 1224 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 SMOC2Q9H3U7 446 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 INTS13Q9NVM9 706 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 XPR1Q9UBH6 696 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 CPNE7Q9UBL6 633 aa4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.86□□□□□ -1.63
SMARCA1-204ENST00000478420 A0A087WWL8 130 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 PIPSLA2A3N6 862 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 F5H697 171 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 TRIAP1O43715 76 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 PQBP1O60828 265 aaKnown RBP4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 ATXN1LP0C7T5 689 aaKnown RBP4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 EGR2P11161 476 aaPredicted RBP4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 CYP2C9P11712 490 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 XRCC6P12956 609 aaKnown RBP eCLIP4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 PHKG2P15735 406 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 ZKSCAN1P17029 563 aaPredicted RBP4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 RPL17P18621 184 aaKnown RBP4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 VIPR2P41587 438 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 NPTX2P47972 431 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 GCLCP48506 637 aaPredicted RBP4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 NDUFV1P49821 464 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 TOB1P50616 345 aaPredicted RBP4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 BLOC1S1P78537 153 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 FMO1Q01740 532 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 SATB1Q01826 763 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 CTBP1Q13363 440 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 LAYNQ6UX15 382 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 KRT78Q8N1N4 520 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 MPP5Q8N3R9 675 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 ASB10Q8WXI3 467 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 SLC46A1Q96NT5 459 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 ZNF518BQ9C0D4 1074 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 TTYH3Q9C0H2 523 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 BTBD1Q9H0C5 482 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 SMURF2Q9HAU4 748 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 CYP4F11Q9HBI6 524 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 ARNT2Q9HBZ2 717 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 CASS4Q9NQ75 786 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 SACM1LQ9NTJ5 587 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 AFF4Q9UHB7 1163 aaKnown RBP4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 DMTF1Q9Y222 760 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 SPATA31A3Q5VYP0 1347 aa4.85□□□□□ -1.63
SMARCA1-204ENST00000478420 A0A0B4J269 797 aa4.84□□□□□ -1.63
SMARCA1-204ENST00000478420 NBPF7P0C2Y1 421 aaPredicted RBP4.84□□□□□ -1.63
SMARCA1-204ENST00000478420 GATA3P23771 443 aa4.84□□□□□ -1.63
SMARCA1-204ENST00000478420 ZEB1P37275 1124 aaPredicted RBP4.84□□□□□ -1.63
SMARCA1-204ENST00000478420 GDF5P43026 501 aa4.84□□□□□ -1.63
SMARCA1-204ENST00000478420 SCAPQ12770 1279 aa4.84□□□□□ -1.63
SMARCA1-204ENST00000478420 TUBB3Q13509 450 aa4.84□□□□□ -1.63
SMARCA1-204ENST00000478420 BOP1Q14137 746 aaKnown RBP4.84□□□□□ -1.63
SMARCA1-204ENST00000478420 FAM9AQ8IZU1 332 aaPredicted RBP4.84□□□□□ -1.63
SMARCA1-204ENST00000478420 FBXO41Q8TF61 875 aa4.84□□□□□ -1.63
SMARCA1-204ENST00000478420 NEU4Q8WWR8 484 aaPredicted RBP4.84□□□□□ -1.63
SMARCA1-204ENST00000478420 LARP4BQ92615 738 aaKnown RBP4.84□□□□□ -1.63
SMARCA1-204ENST00000478420 NMD3Q96D46 503 aaKnown RBP4.84□□□□□ -1.63
SMARCA1-204ENST00000478420 APOL5Q9BWW9 433 aa4.84□□□□□ -1.63
SMARCA1-204ENST00000478420 A1CFQ9NQ94 594 aaKnown RBP4.84□□□□□ -1.63
SMARCA1-204ENST00000478420 STK32BQ9NY57 414 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms