RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 NSMCE1Q8WV22 266 aa4.52□□□□□ -1.69
NCKAP1-204ENST00000477988 UBXN4Q92575 508 aa4.52□□□□□ -1.69
NCKAP1-204ENST00000477988 SCAMP4Q969E2 229 aa4.52□□□□□ -1.69
NCKAP1-204ENST00000477988 FAM136AQ96C01 138 aa4.52□□□□□ -1.69
NCKAP1-204ENST00000477988 E9PLN8 166 aa4.51□□□□□ -1.69
NCKAP1-204ENST00000477988 KRTAP27-1Q3LI81 207 aa4.51□□□□□ -1.69
NCKAP1-204ENST00000477988 STRA8Q7Z7C7 330 aa4.51□□□□□ -1.69
NCKAP1-204ENST00000477988 FAM109AQ8N4B1 249 aa4.51□□□□□ -1.69
NCKAP1-204ENST00000477988 C8orf58Q8NAV2 365 aa4.51□□□□□ -1.69
NCKAP1-204ENST00000477988 PRSS3P2Q8NHM4 247 aa4.51□□□□□ -1.69
NCKAP1-204ENST00000477988 FBXO41Q8TF61 875 aa4.51□□□□□ -1.69
NCKAP1-204ENST00000477988 VKORC1Q9BQB6 163 aa4.51□□□□□ -1.69
NCKAP1-204ENST00000477988 CALCOCO1Q9P1Z2 691 aa4.51□□□□□ -1.69
NCKAP1-204ENST00000477988 AFG3L2Q9Y4W6 797 aa4.51□□□□□ -1.69
NCKAP1-204ENST00000477988 H0YIZ8 118 aa4.5□□□□□ -1.69
NCKAP1-204ENST00000477988 QSOX1O00391 747 aa4.5□□□□□ -1.69
NCKAP1-204ENST00000477988 CHEK2O96017 543 aa4.5□□□□□ -1.69
NCKAP1-204ENST00000477988 EEFSECP57772 596 aaKnown RBP4.5□□□□□ -1.69
NCKAP1-204ENST00000477988 ZNF280AP59817 542 aaPredicted RBP4.5□□□□□ -1.69
NCKAP1-204ENST00000477988 HOXA4Q00056 320 aaPredicted RBP4.5□□□□□ -1.69
NCKAP1-204ENST00000477988 SLC30A10Q6XR72 485 aa4.5□□□□□ -1.69
NCKAP1-204ENST00000477988 MEPCEQ7L2J0 689 aaKnown RBP4.5□□□□□ -1.69
NCKAP1-204ENST00000477988 KLHDC4Q8TBB5 520 aa4.5□□□□□ -1.69
NCKAP1-204ENST00000477988 MARK4Q96L34 752 aa4.5□□□□□ -1.69
NCKAP1-204ENST00000477988 ASB2Q96Q27 587 aa4.5□□□□□ -1.69
NCKAP1-204ENST00000477988 RLIMQ9NVW2 624 aa4.5□□□□□ -1.69
NCKAP1-204ENST00000477988 ETAA1Q9NY74 926 aa4.5□□□□□ -1.69
NCKAP1-204ENST00000477988 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.5□□□□□ -1.69
NCKAP1-204ENST00000477988 E5RJQ4 531 aa4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 BCAR3O75815 825 aa4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 FGBP02675 491 aa4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 ITGALP20701 1170 aa4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 ARHGAP25P42331 645 aa4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 LINC00205P59089 165 aa4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 RBM20Q5T481 1227 aaKnown RBP4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 KIAA1161Q6NSJ0 714 aa4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 DTX2Q86UW9 622 aa4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 CHSY1Q86X52 802 aa4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 CNGA4Q8IV77 575 aa4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 ZBTB8BQ8NAP8 495 aaPredicted RBP4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 HDAC10Q969S8 669 aa4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 MRGPRX4Q96LA9 322 aa4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 SLC2A13Q96QE2 648 aa4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 VPS33BQ9H267 617 aa4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 DLL3Q9NYJ7 618 aa4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 SH2B3Q9UQQ2 575 aa4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 MRPL42Q9Y6G3 142 aaKnown RBP4.49□□□□□ -1.69
NCKAP1-204ENST00000477988 FAM90A10PA6NDY2 464 aa4.48□□□□□ -1.69
NCKAP1-204ENST00000477988 CD6P30203 668 aa4.48□□□□□ -1.69
NCKAP1-204ENST00000477988 SOX5P35711 763 aa4.48□□□□□ -1.69
NCKAP1-204ENST00000477988 TLE1Q04724 770 aa4.48□□□□□ -1.69
NCKAP1-204ENST00000477988 GTF2H3Q13889 308 aa4.48□□□□□ -1.69
NCKAP1-204ENST00000477988 STAT4Q14765 748 aa4.48□□□□□ -1.69
NCKAP1-204ENST00000477988 MIS18BP1Q6P0N0 1132 aa4.48□□□□□ -1.69
NCKAP1-204ENST00000477988 GADL1Q6ZQY3 521 aa4.48□□□□□ -1.69
NCKAP1-204ENST00000477988 NANOGP1Q8N7R0 232 aa4.48□□□□□ -1.69
NCKAP1-204ENST00000477988 PNLDC1Q8NA58 520 aaKnown RBP4.48□□□□□ -1.69
NCKAP1-204ENST00000477988 PSD4Q8NDX1 1056 aa4.48□□□□□ -1.69
NCKAP1-204ENST00000477988 C5orf34Q96MH7 638 aa4.48□□□□□ -1.69
NCKAP1-204ENST00000477988 CNPPD1Q9BV87 410 aa4.48□□□□□ -1.69
NCKAP1-204ENST00000477988 SIK2Q9H0K1 926 aa4.48□□□□□ -1.69
NCKAP1-204ENST00000477988 CAAP1Q9H8G2 361 aa4.48□□□□□ -1.69
NCKAP1-204ENST00000477988 SIDT1Q9NXL6 827 aaKnown RBP4.48□□□□□ -1.69
NCKAP1-204ENST00000477988 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.48□□□□□ -1.69
NCKAP1-204ENST00000477988 PCDHA13Q9Y5I0 950 aa4.48□□□□□ -1.69
NCKAP1-204ENST00000477988 WDR17Q8IZU2 1322 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 ENPP3O14638 875 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 TLR5O60602 858 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 OAZ2O95190 189 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 TMEM191BP0C7N4 346 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 CYP2C18P33260 490 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 CYP2C19P33261 490 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 HTRA4P83105 476 aaPredicted RBP4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 TCF15Q12870 199 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 LRRC41Q15345 812 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 PCID2Q5JVF3 399 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 PPP4R3AQ6IN85 833 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 TAF2Q6P1X5 1199 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 IRF2BP2Q7Z5L9 587 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 RAB24Q969Q5 203 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 VCPIP1Q96JH7 1222 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 DRC1Q96MC2 740 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 CAMKK2Q96RR4 588 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 SMOC2Q9H3U7 446 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 TRNAU1APQ9NX07 287 aaKnown RBP4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 ZNF112Q9UJU3 913 aa4.47□□□□□ -1.69
NCKAP1-204ENST00000477988 WASHC2AQ641Q2 1341 aa4.46□□□□□ -1.69
NCKAP1-204ENST00000477988 NOTCH4Q99466 2003 aa4.46□□□□□ -1.69
NCKAP1-204ENST00000477988 K7ESF4 209 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 SLC16A3O15427 465 aaKnown RBP4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 PRKD3O94806 890 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 CPEP16870 476 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 KRTAP10-5P60370 271 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 TMPRSS15P98073 1019 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 HABP2Q14520 560 aaPredicted RBP4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 Q4G0T1 1027 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 CCDC93Q567U6 631 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 SFRP4Q6FHJ7 346 aaPredicted RBP4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 USP43Q70EL4 1123 aa4.46□□□□□ -1.7
NCKAP1-204ENST00000477988 AMOTL1Q8IY63 956 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms