RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 FBRSL1Q9HCM7 1045 aaKnown RBP21.98■■□□□ 1.11
PDLIM1-202ENST00000477757 TMEM9BQ9NQ34 198 aa21.98■■□□□ 1.11
PDLIM1-202ENST00000477757 CCL26Q9Y258 94 aa21.98■■□□□ 1.11
PDLIM1-202ENST00000477757 CLDN3O15551 220 aa21.97■■□□□ 1.11
PDLIM1-202ENST00000477757 XPOTO43592 962 aaKnown RBP21.97■■□□□ 1.11
PDLIM1-202ENST00000477757 AVPR1AP37288 418 aa21.97■■□□□ 1.11
PDLIM1-202ENST00000477757 PPP2R3AQ06190 1150 aa21.97■■□□□ 1.11
PDLIM1-202ENST00000477757 SAFBQ15424 915 aaKnown RBP eCLIP21.97■■□□□ 1.11
PDLIM1-202ENST00000477757 PMS2CLQ68D20 193 aa21.97■■□□□ 1.11
PDLIM1-202ENST00000477757 TMEM161BQ8NDZ6 487 aa21.97■■□□□ 1.11
PDLIM1-202ENST00000477757 RPLP0P6Q8NHW5 317 aa21.97■■□□□ 1.11
PDLIM1-202ENST00000477757 SNX29Q8TEQ0 813 aa21.97■■□□□ 1.11
PDLIM1-202ENST00000477757 SPIRE2Q8WWL2 714 aa21.97■■□□□ 1.11
PDLIM1-202ENST00000477757 ZCCHC14Q8WYQ9 949 aaKnown RBP21.97■■□□□ 1.11
PDLIM1-202ENST00000477757 USP13Q92995 863 aaPredicted RBP21.97■■□□□ 1.11
PDLIM1-202ENST00000477757 ACDQ96AP0 544 aa21.97■■□□□ 1.11
PDLIM1-202ENST00000477757 SCNM1Q9BWG6 230 aa21.97■■□□□ 1.11
PDLIM1-202ENST00000477757 FREM2Q5SZK8 3169 aa21.97■■□□□ 1.11
PDLIM1-202ENST00000477757 E9PMD0 336 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 PPEF2O14830 753 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 MAPTP10636 758 aaKnown RBP21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 ARSAP15289 507 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 GBP1P32455 592 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 GUCY2FP51841 1108 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 LILRA4P59901 499 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 BFSP1Q12934 665 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 DMC1Q14565 340 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 MGAT5BQ3V5L5 792 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 SLC39A12Q504Y0 691 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 TTC38Q5R3I4 469 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 NAIF1Q69YI7 327 aaPredicted RBP21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 C1orf186Q6ZWK4 172 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 TMEM150AQ86TG1 271 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 C11orf74Q86VG3 221 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 RIN3Q8TB24 985 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 P2RY13Q9BPV8 354 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 TIPINQ9BVW5 301 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 HAPLN2Q9GZV7 340 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 TBX20Q9UMR3 447 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 DNM3Q9UQ16 869 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 STK24Q9Y6E0 443 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 NUP205Q92621 2012 aa21.96■■□□□ 1.11
PDLIM1-202ENST00000477757 ATG2BQ96BY7 2078 aa21.95■■□□□ 1.11
PDLIM1-202ENST00000477757 CDX4O14627 284 aaPredicted RBP21.95■■□□□ 1.1
PDLIM1-202ENST00000477757 KHNYNO15037 678 aaKnown RBP21.95■■□□□ 1.1
PDLIM1-202ENST00000477757 PAX3P23760 479 aa21.95■■□□□ 1.1
PDLIM1-202ENST00000477757 DDX6P26196 483 aaKnown RBP eCLIP21.95■■□□□ 1.1
PDLIM1-202ENST00000477757 GALK1P51570 392 aa21.95■■□□□ 1.1
PDLIM1-202ENST00000477757 PDIA5Q14554 519 aa21.95■■□□□ 1.1
PDLIM1-202ENST00000477757 PDGFRLQ15198 375 aa21.95■■□□□ 1.1
PDLIM1-202ENST00000477757 RINT1Q6NUQ1 792 aa21.95■■□□□ 1.1
PDLIM1-202ENST00000477757 C4orf32Q8N8J7 132 aa21.95■■□□□ 1.1
PDLIM1-202ENST00000477757 IGSF22Q8N9C0 903 aa21.95■■□□□ 1.1
PDLIM1-202ENST00000477757 EZH1Q92800 747 aaPredicted RBP21.95■■□□□ 1.1
PDLIM1-202ENST00000477757 EXOC4Q96A65 974 aa21.95■■□□□ 1.1
PDLIM1-202ENST00000477757 SENP8Q96LD8 212 aa21.95■■□□□ 1.1
PDLIM1-202ENST00000477757 ZCWPW1Q9H0M4 648 aa21.95■■□□□ 1.1
PDLIM1-202ENST00000477757 TDP1Q9NUW8 608 aa21.95■■□□□ 1.1
PDLIM1-202ENST00000477757 MYO16Q9Y6X6 1858 aa21.94■■□□□ 1.1
PDLIM1-202ENST00000477757 DENND4CQ5VZ89 1909 aa21.94■■□□□ 1.1
PDLIM1-202ENST00000477757 CYP11A1P05108 521 aa21.94■■□□□ 1.1
PDLIM1-202ENST00000477757 GUCY2CP25092 1073 aa21.94■■□□□ 1.1
PDLIM1-202ENST00000477757 GJA4P35212 333 aa21.94■■□□□ 1.1
PDLIM1-202ENST00000477757 TNFSF9P41273 254 aa21.94■■□□□ 1.1
PDLIM1-202ENST00000477757 GUCY1B3Q02153 619 aa21.94■■□□□ 1.1
PDLIM1-202ENST00000477757 TAF12Q16514 161 aa21.94■■□□□ 1.1
PDLIM1-202ENST00000477757 CC2D1AQ6P1N0 951 aaPredicted RBP21.94■■□□□ 1.1
PDLIM1-202ENST00000477757 LRSAM1Q6UWE0 723 aa21.94■■□□□ 1.1
PDLIM1-202ENST00000477757 CYP2U1Q7Z449 544 aa21.94■■□□□ 1.1
PDLIM1-202ENST00000477757 MAB21L3Q8N8X9 362 aa21.94■■□□□ 1.1
PDLIM1-202ENST00000477757 C2orf15Q8WU43 125 aaKnown RBP21.94■■□□□ 1.1
PDLIM1-202ENST00000477757 TSPAN18Q96SJ8 248 aa21.94■■□□□ 1.1
PDLIM1-202ENST00000477757 OBSL1O75147 1896 aa21.94■■□□□ 1.1
PDLIM1-202ENST00000477757 SOBPA7XYQ1 873 aa21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 SFI1A8K8P3 1242 aa21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 LACTBL1A8MY62 500 aa21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 FAM189A1O60320 539 aa21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 PLS3P13797 630 aa21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 U2AF2P26368 475 aaKnown RBP eCLIP21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 NMT1P30419 496 aaKnown RBP21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 MATR3P43243 847 aaKnown RBP eCLIP21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 NLRP12P59046 1061 aa21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 RING1Q06587 406 aa21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 ZNF268Q14587 947 aaPredicted RBP21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 ENOX2Q16206 610 aaKnown RBP21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 SPATA1Q5VX52 437 aa21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 CPA6Q8N4T0 437 aa21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 GIPC2Q8TF65 315 aa21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 RAB34Q9BZG1 259 aa21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 FOXP1Q9H334 677 aaPredicted RBP21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 KCNG1Q9UIX4 513 aa21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 LHX6Q9UPM6 363 aa21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 NEUROG3Q9Y4Z2 214 aa21.93■■□□□ 1.1
PDLIM1-202ENST00000477757 PATE3B3GLJ2 98 aa21.92■■□□□ 1.1
PDLIM1-202ENST00000477757 F11P03951 625 aa21.92■■□□□ 1.1
PDLIM1-202ENST00000477757 ADRB2P07550 413 aa21.92■■□□□ 1.1
PDLIM1-202ENST00000477757 HMGA1P17096 107 aaKnown RBP21.92■■□□□ 1.1
PDLIM1-202ENST00000477757 DGKEP52429 567 aa21.92■■□□□ 1.1
PDLIM1-202ENST00000477757 SMTNP53814 917 aa21.92■■□□□ 1.1
PDLIM1-202ENST00000477757 KYAT1Q16773 422 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms