RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 MTF1Q14872 753 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 NDUFA5Q16718 116 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 PLEKHN1Q494U1 663 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 PDCD4Q53EL6 469 aaKnown RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 SLC44A4Q53GD3 710 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 AKNAD1Q5T1N1 836 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 TBC1D9BQ66K14 1250 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 HAUS3Q68CZ6 603 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 SPTY2D1Q68D10 685 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 BTNL9Q6UXG8 535 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 KIF6Q6ZMV9 814 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 NCCRP1Q6ZVX7 275 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 ASRGL1Q7L266 308 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 APTXQ7Z2E3 356 aaKnown RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 DEFB132Q7Z7B7 95 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 TBC1D1Q86TI0 1168 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 SLCO6A1Q86UG4 719 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 LSRQ86X29 649 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 KIAA0825Q8IV33 1275 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 ZSCAN29Q8IWY8 852 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 PHACTR4Q8IZ21 702 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 SLC16A11Q8NCK7 471 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 PIGOQ8TEQ8 1089 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 WASF1Q92558 559 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 SLC35B4Q969S0 331 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 HAUS1Q96CS2 278 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 DHTKD1Q96HY7 919 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 FCRL2Q96LA5 508 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 FRMD6Q96NE9 622 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 ZNF317Q96PQ6 595 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 TUBGCP5Q96RT8 1024 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 ARPC5LQ9BPX5 153 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 LRRC1Q9BTT6 524 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 DSCC1Q9BVC3 393 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 TMEM109Q9BVC6 243 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 KRTAP3-1Q9BYR8 98 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 FTOQ9C0B1 505 aaKnown RBP eCLIP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 CARD9Q9H257 536 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 IL25Q9H293 177 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 PHAXQ9H814 394 aaKnown RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 CYP39A1Q9NYL5 469 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 TFCP2L1Q9NZI6 479 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 AIPL1Q9NZN9 384 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 CHPF2Q9P2E5 772 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 DNAJB4Q9UDY4 337 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 SAP30BPQ9UHR5 308 aaKnown RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 MAN1B1Q9UKM7 699 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 PLA2G2DQ9UNK4 145 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 PLAAQ9Y263 795 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 ZNF652Q9Y2D9 606 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 ARL2BPQ9Y2Y0 163 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 USP15Q9Y4E8 981 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-212ENST00000477520 TAF6LQ9Y6J9 622 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 C5P01031 1676 aa5.04□□□□□ -1.6
PTCD3-212ENST00000477520 COL5A3P25940 1745 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-212ENST00000477520 ATP8B3O60423 1300 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 PRAMEF22A3QJZ6 481 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 WTIPA6NIX2 430 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-212ENST00000477520 ERVV-1B6SEH8 477 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 F6X3S4 739 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 TRAFD1O14545 582 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-212ENST00000477520 NVLO15381 856 aaKnown RBP5.03□□□□□ -1.6
PTCD3-212ENST00000477520 TTI1O43156 1089 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 PJA2O43164 708 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 GRIN3BO60391 1043 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 SNX3O60493 162 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 TAF5LO75529 589 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 UBOX5O94941 541 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 LCA5LO95447 670 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 PRAMEF1O95521 474 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 AGTP01019 485 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 A1BGP04217 495 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 PABPC4LP0CB38 370 aaKnown RBP5.03□□□□□ -1.6
PTCD3-212ENST00000477520 PIM1P11309 404 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-212ENST00000477520 MYL6BP14649 208 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 PORP16435 677 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-212ENST00000477520 POLR2EP19388 210 aaKnown RBP5.03□□□□□ -1.6
PTCD3-212ENST00000477520 PAX3P23760 479 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 EEF1GP26641 437 aaKnown RBP5.03□□□□□ -1.6
PTCD3-212ENST00000477520 HNRNPH3P31942 346 aaKnown RBP5.03□□□□□ -1.6
PTCD3-212ENST00000477520 CTNNA1P35221 906 aaKnown RBP5.03□□□□□ -1.6
PTCD3-212ENST00000477520 RFC4P35249 363 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 IARSP41252 1262 aaKnown RBP5.03□□□□□ -1.6
PTCD3-212ENST00000477520 ALDH5A1P51649 535 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-212ENST00000477520 INHBCP55103 352 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 NCALDP61601 193 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 XIAPP98170 497 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 CYP4F8P98187 520 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 EXOSC10Q01780 885 aaKnown RBP5.03□□□□□ -1.6
PTCD3-212ENST00000477520 TMEM62Q0P6H9 643 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 NEXNQ0ZGT2 675 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 AIMP1Q12904 312 aaKnown RBP5.03□□□□□ -1.6
PTCD3-212ENST00000477520 LAPTM5Q13571 262 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 TTF1Q15361 905 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-212ENST00000477520 SLC15A2Q16348 729 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 MUM1Q2TAK8 710 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 TTC39AQ5SRH9 613 aa5.03□□□□□ -1.6
PTCD3-212ENST00000477520 DAB2IPQ5VWQ8 1189 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms