RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 TAF7LQ5H9L4 462 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 KCNK18Q7Z418 384 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 RHOT1Q8IXI2 618 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 DCBLD1Q8N8Z6 715 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.53□□□□□ -1.84
XRN1-211ENST00000477237 LMBR1Q8WVP7 490 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 RAB24Q969Q5 203 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 ASB2Q96Q27 587 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 TPSD1Q9BZJ3 242 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 DNAJC28Q9NX36 388 aa3.53□□□□□ -1.84
XRN1-211ENST00000477237 H0YIZ8 118 aa3.52□□□□□ -1.85
XRN1-211ENST00000477237 RBMS2Q15434 407 aaKnown RBP3.52□□□□□ -1.85
XRN1-211ENST00000477237 TBCCQ15814 346 aa3.52□□□□□ -1.85
XRN1-211ENST00000477237 ANO4Q32M45 955 aa3.52□□□□□ -1.85
XRN1-211ENST00000477237 AARS2Q5JTZ9 985 aaKnown RBP3.52□□□□□ -1.85
XRN1-211ENST00000477237 SLC30A10Q6XR72 485 aa3.52□□□□□ -1.85
XRN1-211ENST00000477237 DDX46Q7L014 1031 aaKnown RBP3.52□□□□□ -1.85
XRN1-211ENST00000477237 SLC17A8Q8NDX2 589 aa3.52□□□□□ -1.85
XRN1-211ENST00000477237 OR2I1PQ8NGU4 316 aa3.52□□□□□ -1.85
XRN1-211ENST00000477237 PKNOX2Q96KN3 472 aa3.52□□□□□ -1.85
XRN1-211ENST00000477237 SLC2A13Q96QE2 648 aa3.52□□□□□ -1.85
XRN1-211ENST00000477237 IMPG2Q9BZV3 1241 aa3.52□□□□□ -1.85
XRN1-211ENST00000477237 AMBRA1Q9C0C7 1298 aa3.52□□□□□ -1.85
XRN1-211ENST00000477237 MANSC1Q9H8J5 431 aa3.52□□□□□ -1.85
XRN1-211ENST00000477237 VTA1Q9NP79 307 aa3.52□□□□□ -1.85
XRN1-211ENST00000477237 PLAAQ9Y263 795 aa3.52□□□□□ -1.85
XRN1-211ENST00000477237 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
XRN1-211ENST00000477237 FAM171A2A8MVW0 826 aa3.51□□□□□ -1.85
XRN1-211ENST00000477237 E7ENX8 843 aa3.51□□□□□ -1.85
XRN1-211ENST00000477237 F5H697 171 aa3.51□□□□□ -1.85
XRN1-211ENST00000477237 ZEB2O60315 1214 aa3.51□□□□□ -1.85
XRN1-211ENST00000477237 ABLIM3O94929 683 aa3.51□□□□□ -1.85
XRN1-211ENST00000477237 SBK3P0C264 359 aa3.51□□□□□ -1.85
XRN1-211ENST00000477237 CDK11BP21127 795 aaKnown RBP3.51□□□□□ -1.85
XRN1-211ENST00000477237 ATP5F1P24539 256 aaPredicted RBP3.51□□□□□ -1.85
XRN1-211ENST00000477237 TAP2Q03519 686 aa3.51□□□□□ -1.85
XRN1-211ENST00000477237 MGAT2Q10469 447 aa3.51□□□□□ -1.85
XRN1-211ENST00000477237 RSPH3Q86UC2 560 aa3.51□□□□□ -1.85
XRN1-211ENST00000477237 UBR7Q8N806 425 aa3.51□□□□□ -1.85
XRN1-211ENST00000477237 PPM1NQ8N819 430 aa3.51□□□□□ -1.85
XRN1-211ENST00000477237 SREK1Q8WXA9 508 aaKnown RBP3.51□□□□□ -1.85
XRN1-211ENST00000477237 C7orf25Q9BPX7 421 aa3.51□□□□□ -1.85
XRN1-211ENST00000477237 ACTRT3Q9BYD9 372 aa3.51□□□□□ -1.85
XRN1-211ENST00000477237 FOXP1Q9H334 677 aaPredicted RBP3.51□□□□□ -1.85
XRN1-211ENST00000477237 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.51□□□□□ -1.85
XRN1-211ENST00000477237 A0A087X0B3 334 aa3.5□□□□□ -1.85
XRN1-211ENST00000477237 FCHO1O14526 889 aa3.5□□□□□ -1.85
XRN1-211ENST00000477237 ADAM10O14672 748 aa3.5□□□□□ -1.85
XRN1-211ENST00000477237 GRM6O15303 877 aa3.5□□□□□ -1.85
XRN1-211ENST00000477237 IGSF3O75054 1194 aa3.5□□□□□ -1.85
XRN1-211ENST00000477237 MTHFD1P11586 935 aaKnown RBP3.5□□□□□ -1.85
XRN1-211ENST00000477237 SLC5A3P53794 718 aa3.5□□□□□ -1.85
XRN1-211ENST00000477237 DHCR24Q15392 516 aa3.5□□□□□ -1.85
XRN1-211ENST00000477237 TAPT1Q6NXT6 567 aa3.5□□□□□ -1.85
XRN1-211ENST00000477237 ANKRD16Q6P6B7 361 aa3.5□□□□□ -1.85
XRN1-211ENST00000477237 ZNF804AQ7Z570 1209 aa3.5□□□□□ -1.85
XRN1-211ENST00000477237 DCP1BQ8IZD4 617 aaKnown RBP3.5□□□□□ -1.85
XRN1-211ENST00000477237 TMIEQ8NEW7 156 aa3.5□□□□□ -1.85
XRN1-211ENST00000477237 WBP1Q96G27 269 aa3.5□□□□□ -1.85
XRN1-211ENST00000477237 TMX3Q96JJ7 454 aa3.5□□□□□ -1.85
XRN1-211ENST00000477237 MACROD1Q9BQ69 325 aa3.5□□□□□ -1.85
XRN1-211ENST00000477237 C14orf119Q9NWQ9 140 aa3.5□□□□□ -1.85
XRN1-211ENST00000477237 DLL3Q9NYJ7 618 aa3.5□□□□□ -1.85
XRN1-211ENST00000477237 INTUQ9ULD6 942 aa3.5□□□□□ -1.85
XRN1-211ENST00000477237 SLC45A2Q9UMX9 530 aa3.5□□□□□ -1.85
XRN1-211ENST00000477237 NOTCH3Q9UM47 2321 aa3.49□□□□□ -1.85
XRN1-211ENST00000477237 SPATA31A3Q5VYP0 1347 aa3.49□□□□□ -1.85
XRN1-211ENST00000477237 HMGB1P09429 215 aaKnown RBP3.49□□□□□ -1.85
XRN1-211ENST00000477237 IL1R2P27930 398 aa3.49□□□□□ -1.85
XRN1-211ENST00000477237 CTXN1P60606 82 aa3.49□□□□□ -1.85
XRN1-211ENST00000477237 CYP4F2P78329 520 aa3.49□□□□□ -1.85
XRN1-211ENST00000477237 POU6F2P78424 691 aaPredicted RBP3.49□□□□□ -1.85
XRN1-211ENST00000477237 HOXA4Q00056 320 aaPredicted RBP3.49□□□□□ -1.85
XRN1-211ENST00000477237 PIGFQ07326 219 aa3.49□□□□□ -1.85
XRN1-211ENST00000477237 NPY5RQ15761 445 aa3.49□□□□□ -1.85
XRN1-211ENST00000477237 FLYWCH1Q4VC44 716 aa3.49□□□□□ -1.85
XRN1-211ENST00000477237 NAPRTQ6XQN6 538 aa3.49□□□□□ -1.85
XRN1-211ENST00000477237 STRA8Q7Z7C7 330 aa3.49□□□□□ -1.85
XRN1-211ENST00000477237 KLHDC4Q8TBB5 520 aa3.49□□□□□ -1.85
XRN1-211ENST00000477237 POC1BQ8TC44 478 aa3.49□□□□□ -1.85
XRN1-211ENST00000477237 NRG4Q8WWG1 115 aa3.49□□□□□ -1.85
XRN1-211ENST00000477237 THOC3Q96J01 351 aaKnown RBP3.49□□□□□ -1.85
XRN1-211ENST00000477237 RITA1Q96K30 269 aa3.49□□□□□ -1.85
XRN1-211ENST00000477237 TRIB1Q96RU8 372 aa3.49□□□□□ -1.85
XRN1-211ENST00000477237 PACSIN1Q9BY11 444 aa3.49□□□□□ -1.85
XRN1-211ENST00000477237 MAPRE3Q9UPY8 281 aa3.49□□□□□ -1.85
XRN1-211ENST00000477237 APOBEC2Q9Y235 224 aaKnown RBP3.49□□□□□ -1.85
XRN1-211ENST00000477237 MRPL42Q9Y6G3 142 aaKnown RBP3.49□□□□□ -1.85
XRN1-211ENST00000477237 EME2A4GXA9 379 aaPredicted RBP3.48□□□□□ -1.85
XRN1-211ENST00000477237 QSOX1O00391 747 aa3.48□□□□□ -1.85
XRN1-211ENST00000477237 TRIAP1O43715 76 aa3.48□□□□□ -1.85
XRN1-211ENST00000477237 NXPH3O95157 252 aa3.48□□□□□ -1.85
XRN1-211ENST00000477237 CRYABP02511 175 aaKnown RBP3.48□□□□□ -1.85
XRN1-211ENST00000477237 CYP2C18P33260 490 aa3.48□□□□□ -1.85
XRN1-211ENST00000477237 KCNJ5P48544 419 aa3.48□□□□□ -1.85
XRN1-211ENST00000477237 NDUFV1P49821 464 aa3.48□□□□□ -1.85
XRN1-211ENST00000477237 EEFSECP57772 596 aaKnown RBP3.48□□□□□ -1.85
XRN1-211ENST00000477237 PABPC1LQ4VXU2 614 aaKnown RBP3.48□□□□□ -1.85
XRN1-211ENST00000477237 PCID2Q5JVF3 399 aa3.48□□□□□ -1.85
XRN1-211ENST00000477237 GSG1LQ6UXU4 331 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms