RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 C1QTNF9P0C862 333 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 ODC1P11926 461 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 TYMPP19971 482 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 CNR2P34972 360 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 MPLP40238 635 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 TRAPPC10P48553 1259 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 LIG4P49917 911 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 MYBPC2Q14324 1141 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 ARHGAP15Q53QZ3 475 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 TMEM196Q5HYL7 178 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 PLA2G2CQ5R387 149 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 WSCD1Q658N2 575 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 PSAPL1Q6NUJ1 521 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 DTHD1Q6ZMT9 781 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 ZSWIM2Q8NEG5 633 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 MSANTD3Q96H12 275 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 SLC22A12Q96S37 553 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 FAM83CQ9BQN1 747 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 RPF1Q9H9Y2 349 aaKnown RBP12.97□□□□□ -0.33
HDAC6-219ENST00000476625 MAFFQ9ULX9 164 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 MAGED2Q9UNF1 606 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-219ENST00000476625 ADAMTS9Q9P2N4 1935 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 CFAP47Q6ZTR5 3102 aa12.97□□□□□ -0.33
HDAC6-219ENST00000476625 THADAQ6YHU6 1953 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 FRYQ5TBA9 3013 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 PIRO00625 290 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 HNRNPDLO14979 420 aaKnown RBP12.96□□□□□ -0.33
HDAC6-219ENST00000476625 OGTO15294 1046 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 TADA3O75528 432 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 KCNK5O95279 499 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 ZNF806P0C7X5 589 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 HMGA1P17096 107 aaKnown RBP12.96□□□□□ -0.33
HDAC6-219ENST00000476625 CYP3A5P20815 502 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 GALK1P51570 392 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 GRIN1Q05586 938 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 RUNX3Q13761 415 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 TMEM119Q4V9L6 283 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 ZC2HC1CQ53FD0 456 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-219ENST00000476625 HYIQ5T013 277 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 ARMCX5Q6P1M9 558 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 CACNA2D4Q7Z3S7 1137 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 EFCAB13Q8IY85 973 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 CMTM8Q8IZV2 173 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 FAM184AQ8NB25 1140 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 RPLP0P6Q8NHW5 317 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 PYM1Q9BRP8 204 aaKnown RBP12.96□□□□□ -0.33
HDAC6-219ENST00000476625 PI4K2AQ9BTU6 479 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 MSTO1Q9BUK6 570 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 DUSP15Q9H1R2 295 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-219ENST00000476625 C17orf75Q9HAS0 396 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 PLEKHA5Q9HAU0 1116 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 CPSF3Q9UKF6 684 aaKnown RBP12.96□□□□□ -0.33
HDAC6-219ENST00000476625 TBX20Q9UMR3 447 aa12.96□□□□□ -0.33
HDAC6-219ENST00000476625 TPRP12270 2363 aaKnown RBP12.96□□□□□ -0.33
HDAC6-219ENST00000476625 CHD8Q9HCK8 2581 aa12.96□□□□□ -0.34
HDAC6-219ENST00000476625 A0A0B4J269 797 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 ANO9A1A5B4 782 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 PATE3B3GLJ2 98 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 CYB561D2O14569 222 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 F11P03951 625 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 HAPLN1P10915 354 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-219ENST00000476625 ACAT1P24752 427 aaKnown RBP12.95□□□□□ -0.34
HDAC6-219ENST00000476625 LIMK1P53667 647 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 SMTNP53814 917 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 NLRP12P59046 1061 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 MCM6Q14566 821 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 TMEM132DQ14C87 1099 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 PLK5Q496M5 336 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 ITIH5Q86UX2 942 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 GPBP1Q86WP2 473 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 FIZ1Q96SL8 496 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 CYP2S1Q96SQ9 504 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 KIF2CQ99661 725 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 LLPHQ9BRT6 129 aaKnown RBP12.95□□□□□ -0.34
HDAC6-219ENST00000476625 TPSD1Q9BZJ3 242 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 ZHX3Q9H4I2 956 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 OBP2AQ9NY56 170 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 SLC8A2Q9UPR5 921 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 ASB3Q9Y575 518 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 WNT6Q9Y6F9 365 aa12.95□□□□□ -0.34
HDAC6-219ENST00000476625 SCAMP3O14828 347 aaKnown RBP12.94□□□□□ -0.34
HDAC6-219ENST00000476625 ADRB2P07550 413 aa12.94□□□□□ -0.34
HDAC6-219ENST00000476625 BCKDHBP21953 392 aa12.94□□□□□ -0.34
HDAC6-219ENST00000476625 CDC25CP30307 473 aa12.94□□□□□ -0.34
HDAC6-219ENST00000476625 HOXA6P31267 233 aa12.94□□□□□ -0.34
HDAC6-219ENST00000476625 GJA4P35212 333 aa12.94□□□□□ -0.34
HDAC6-219ENST00000476625 PRPHP41219 470 aa12.94□□□□□ -0.34
HDAC6-219ENST00000476625 ATP2C1P98194 919 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-219ENST00000476625 CREB5Q02930 508 aa12.94□□□□□ -0.34
HDAC6-219ENST00000476625 FOXC1Q12948 553 aa12.94□□□□□ -0.34
HDAC6-219ENST00000476625 PSMD2Q13200 908 aa12.94□□□□□ -0.34
HDAC6-219ENST00000476625 VEPH1Q14D04 833 aa12.94□□□□□ -0.34
HDAC6-219ENST00000476625 RNF43Q68DV7 783 aa12.94□□□□□ -0.34
HDAC6-219ENST00000476625 MCTP1Q6DN14 999 aa12.94□□□□□ -0.34
HDAC6-219ENST00000476625 SFTPA1Q8IWL2 248 aa12.94□□□□□ -0.34
HDAC6-219ENST00000476625 MYCT1Q8N699 235 aa12.94□□□□□ -0.34
HDAC6-219ENST00000476625 EDEM2Q9BV94 578 aa12.94□□□□□ -0.34
HDAC6-219ENST00000476625 LSM14BQ9BX40 385 aaKnown RBP12.94□□□□□ -0.34
HDAC6-219ENST00000476625 RAB34Q9BZG1 259 aa12.94□□□□□ -0.34
HDAC6-219ENST00000476625 BLOC1S4Q9NUP1 217 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms