RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), human

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD55-208	ENST00000476590	BIRC8	Q96P09	236 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	NLRP3	Q96P20	1036 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	TSEN34	Q9BSV6	310 aa	Known RBP	4.36	□□□□□ -1.71
CD55-208	ENST00000476590	NIFK	Q9BYG3	293 aa	Known RBP	4.36	□□□□□ -1.71
CD55-208	ENST00000476590	AGXT2	Q9BYV1	514 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	OSBPL6	Q9BZF3	934 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	KIAA1683	Q9H0B3	1180 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	ADNP	Q9H2P0	1102 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	C19orf44	Q9H6X5	657 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	SH2D4A	Q9H788	454 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	SP140L	Q9H930	580 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	SIAE	Q9HAT2	523 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	WDR6	Q9NNW5	1121 aa	Known RBP	4.36	□□□□□ -1.71
CD55-208	ENST00000476590	NLRC4	Q9NPP4	1024 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	GDF3	Q9NR23	364 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	STMN3	Q9NZ72	180 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	AIPL1	Q9NZN9	384 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	ASIC3	Q9UHC3	531 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	PFDN2	Q9UHV9	154 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	CDV3	Q9UKY7	258 aa	Known RBP	4.36	□□□□□ -1.71
CD55-208	ENST00000476590	PCDHA12	Q9UN75	941 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	SOX13	Q9UN79	622 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	GTF2A1L	Q9UNN4	478 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	NOD1	Q9Y239	953 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	ARL2BP	Q9Y2Y0	163 aa		4.36	□□□□□ -1.71
CD55-208	ENST00000476590	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4.35	□□□□□ -1.71
CD55-208	ENST00000476590	PNMA6F	A0A0J9YX94	578 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590		A0A1W2PQ27	194 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590		A0A1W2PQ64	194 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590		A0A1W2PQD8	194 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	CCDC160	A6NGH7	325 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	HNRNPCL2	B2RXH8	293 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	CFAP99	D6REC4	459 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590		F8W810	466 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590		H7C1D1	291 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	WASL	O00401	505 aa	Predicted RBP	4.35	□□□□□ -1.71
CD55-208	ENST00000476590	PDE2A	O00408	941 aa	Predicted RBP	4.35	□□□□□ -1.71
CD55-208	ENST00000476590	IRS4	O14654	1257 aa	Predicted RBP	4.35	□□□□□ -1.71
CD55-208	ENST00000476590	HNRNPCL1	O60812	293 aa	Known RBP	4.35	□□□□□ -1.71
CD55-208	ENST00000476590	SRGAP2	O75044	1071 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	RSL1D1	O76021	490 aa	Known RBP	4.35	□□□□□ -1.71
CD55-208	ENST00000476590	OR6B1	O95007	311 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	PLEKHA8P1	O95397	391 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	DDX58	O95786	925 aa	Known RBP	4.35	□□□□□ -1.71
CD55-208	ENST00000476590	ITGB3	P05106	788 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	TFPT	P0C1Z6	253 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	SFTPC	P11686	197 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	TAL1	P17542	331 aa	Predicted RBP	4.35	□□□□□ -1.71
CD55-208	ENST00000476590	ATF7	P17544	494 aa	Predicted RBP	4.35	□□□□□ -1.71
CD55-208	ENST00000476590	GRIA2	P42262	883 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	CHRNA4	P43681	627 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	PHKA2	P46019	1235 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	RASSF2	P50749	326 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	COPA	P53621	1224 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	PDE1A	P54750	535 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	ALDH18A1	P54886	795 aa	Known RBP	4.35	□□□□□ -1.71
CD55-208	ENST00000476590	ATP6V0D1	P61421	351 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	DSG1	Q02413	1049 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	KDSR	Q06136	332 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	PDE1C	Q14123	709 aa	Predicted RBP	4.35	□□□□□ -1.71
CD55-208	ENST00000476590	GIT2	Q14161	759 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	SEMA3A	Q14563	771 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	C16orf72	Q14CZ0	275 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	PTPN21	Q16825	1174 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	SMU1	Q2TAY7	513 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	LEXM	Q3ZCV2	418 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	HYI	Q5T013	277 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	SLFN13	Q68D06	897 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	TTBK2	Q6IQ55	1244 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	PADI6	Q6TGC4	694 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	C16orf86	Q6ZW13	317 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	KCTD20	Q7Z5Y7	419 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	RASSF3	Q86WH2	238 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	THNSL2	Q86YJ6	484 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	TICAM1	Q8IUC6	712 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	ERI1	Q8IV48	349 aa	Known RBP	4.35	□□□□□ -1.71
CD55-208	ENST00000476590	ELMOD2	Q8IZ81	293 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	CENPS	Q8N2Z9	138 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	CSGALNACT2	Q8N6G5	542 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	ALLC	Q8N6M5	410 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	EIF1AD	Q8N9N8	165 aa	Known RBP	4.35	□□□□□ -1.71
CD55-208	ENST00000476590	PCYOX1L	Q8NBM8	494 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	PLPP7	Q8NBV4	271 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	ARRDC4	Q8NCT1	418 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	PJA1	Q8NG27	643 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	CHPT1	Q8WUD6	406 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	NRG4	Q8WWG1	115 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	RASSF5	Q8WWW0	418 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	BORCS5	Q969J3	196 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	PMEPA1	Q969W9	287 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	INPP4A	Q96PE3	977 aa	Predicted RBP	4.35	□□□□□ -1.71
CD55-208	ENST00000476590	TM6SF1	Q9BZW5	370 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.35	□□□□□ -1.71
CD55-208	ENST00000476590	RNF41	Q9H4P4	317 aa	Predicted RBP	4.35	□□□□□ -1.71
CD55-208	ENST00000476590	ATP13A3	Q9H7F0	1226 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	PLEKHA5	Q9HAU0	1116 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	SLC39A1	Q9NY26	324 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	TBC1D14	Q9P2M4	693 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	TNFRSF10D	Q9UBN6	386 aa		4.35	□□□□□ -1.71
CD55-208	ENST00000476590	FBXO2	Q9UK22	296 aa	Predicted RBP	4.35	□□□□□ -1.71

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