RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 PPP4R3AQ6IN85 833 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 MOXD1Q6UVY6 613 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 ZNF574Q6ZN55 896 aaPredicted RBP7.09□□□□□ -1.27
CLDN4-205ENST00000476494 LRRC69Q6ZNQ3 347 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 PDZD4Q76G19 769 aaPredicted RBP7.09□□□□□ -1.27
CLDN4-205ENST00000476494 CEP57Q86XR8 500 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 ARID3BQ8IVW6 561 aaPredicted RBP7.09□□□□□ -1.27
CLDN4-205ENST00000476494 CKAP2LQ8IYA6 745 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 TCEAL8Q8IYN2 117 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 GALNT15Q8N3T1 639 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 KRI1Q8N9T8 703 aaKnown RBP7.09□□□□□ -1.27
CLDN4-205ENST00000476494 CNNM3Q8NE01 707 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 RPLP0P6Q8NHW5 317 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 FAM200AQ8TCP9 573 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 SNRNP27Q8WVK2 155 aaKnown RBP7.09□□□□□ -1.27
CLDN4-205ENST00000476494 RLN3Q8WXF3 142 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 SCLT1Q96NL6 688 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 PYM1Q9BRP8 204 aaKnown RBP7.09□□□□□ -1.27
CLDN4-205ENST00000476494 EIF2AQ9BY44 585 aaKnown RBP7.09□□□□□ -1.27
CLDN4-205ENST00000476494 OBP2AQ9NY56 170 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 SRPRBQ9Y5M8 271 aaKnown RBP7.09□□□□□ -1.27
CLDN4-205ENST00000476494 BACE2Q9Y5Z0 518 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 CDY1Q9Y6F8 540 aa7.09□□□□□ -1.27
CLDN4-205ENST00000476494 SETD2Q9BYW2 2564 aaPredicted RBP7.09□□□□□ -1.28
CLDN4-205ENST00000476494 IGLV3-22A0A075B6J6 115 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 CYP3A7-CYP3A51PA0A087WV96 503 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 PLK4O00444 970 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 NR1I2O75469 434 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 CFIP05156 583 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 CYP3A4P08684 503 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 ATF2P15336 505 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 CYP3A7P24462 503 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 DPP6P42658 865 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 ATXN3P54252 364 aaPredicted RBP7.08□□□□□ -1.28
CLDN4-205ENST00000476494 CXADRP78310 365 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 ATP2C1P98194 919 aaPredicted RBP7.08□□□□□ -1.28
CLDN4-205ENST00000476494 ROR1Q01973 937 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 PTPRNQ16849 979 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 INF2Q27J81 1249 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 MAP7D1Q3KQU3 841 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 FBXO43Q4G163 708 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 STXBP5Q5T5C0 1151 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 CYP4A22Q5TCH4 519 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 JAKMIP3Q5VZ66 844 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 SLC8B1Q6J4K2 584 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 CCDC73Q6ZRK6 1079 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 ARMCX6Q7L4S7 300 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 LPCAT2Q7L5N7 544 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 SPACA3Q8IXA5 215 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 YAF2Q8IY57 180 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 CEP76Q8TAP6 659 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 TBCKQ8TEA7 893 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 HASPINQ8TF76 798 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 CCDC34Q96HJ3 373 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 FAM167AQ96KS9 214 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 GPR88Q9GZN0 384 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 GDPD2Q9HCC8 539 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 DDX19AQ9NUU7 478 aaKnown RBP7.08□□□□□ -1.28
CLDN4-205ENST00000476494 FAM13BQ9NYF5 915 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 GABBR1Q9UBS5 961 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 TBX20Q9UMR3 447 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 PCDHA7Q9UN72 937 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 GIT1Q9Y2X7 761 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 PCDHB6Q9Y5E3 794 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 PCDHA10Q9Y5I2 948 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 TRIP11Q15643 1979 aa7.08□□□□□ -1.28
CLDN4-205ENST00000476494 TLN1Q9Y490 2541 aaKnown RBP7.07□□□□□ -1.28
CLDN4-205ENST00000476494 LRBAP50851 2863 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 ARID2Q68CP9 1835 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 FAM237AA0A1B0GTK4 181 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 FAM86B1E9PN63 330 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 TBX3O15119 743 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 RRP8O43159 456 aaKnown RBP7.07□□□□□ -1.28
CLDN4-205ENST00000476494 GADD45BO75293 160 aaPredicted RBP7.07□□□□□ -1.28
CLDN4-205ENST00000476494 PRAMEF12O95522 483 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 LRG1P02750 347 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 OATP04181 439 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 FAM86B2P0C5J1 330 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 HLA-EP13747 358 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 ATP2B1P20020 1258 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 DRD1P21728 446 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 WEE1P30291 646 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 CIITAP33076 1130 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 MCM7P33993 719 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 LONP1P36776 959 aaKnown RBP7.07□□□□□ -1.28
CLDN4-205ENST00000476494 SREBF1P36956 1147 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 FAM160A1Q05DH4 1040 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 MYO1EQ12965 1108 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 GRIK3Q13003 919 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 RTP5Q14D33 572 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 ZNF174Q15697 407 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 UGCGQ16739 394 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 EARS2Q5JPH6 523 aaKnown RBP7.07□□□□□ -1.28
CLDN4-205ENST00000476494 LYSMD4Q5XG99 296 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 TMEM92Q6UXU6 159 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.07□□□□□ -1.28
CLDN4-205ENST00000476494 DTHD1Q6ZMT9 781 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 NIPA1Q7RTP0 329 aa7.07□□□□□ -1.28
CLDN4-205ENST00000476494 ELOA2Q8IYF1 753 aaPredicted RBP7.07□□□□□ -1.28
CLDN4-205ENST00000476494 TSTD1Q8NFU3 115 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms