RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 TOR1BO14657 336 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 SLC5A1P13866 664 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 KCNA2P16389 499 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 CHRM3P20309 590 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 DDX6P26196 483 aaKnown RBP eCLIP6.1□□□□□ -1.43
PTCD3-211ENST00000476215 SLC11A2P49281 568 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 NEK3P51956 506 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 UCP3P55916 312 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 CTBP1Q13363 440 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 TIGD2Q4W5G0 525 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 PPP1R32Q7Z5V6 425 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 CLNKQ7Z7G1 428 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 SYNE4Q8N205 404 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 MPP5Q8N3R9 675 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 SLC15A4Q8N697 577 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 DNAJC5GQ8N7S2 189 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 LRIG1Q96JA1 1093 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 NAA15Q9BXJ9 866 aaKnown RBP6.1□□□□□ -1.43
PTCD3-211ENST00000476215 ALOXE3Q9BYJ1 711 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 DPH1Q9BZG8 443 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 BTBD1Q9H0C5 482 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 ETAA1Q9NY74 926 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 CTTNBP2NLQ9P2B4 639 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 CORO2BQ9UQ03 480 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 TMX2Q9Y320 296 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 NEU2Q9Y3R4 380 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 GRID2IPA4D2P6 1211 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 UNC119BA6NIH7 251 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 CDKL5O76039 1030 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 SUN1O94901 812 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 RPL17P18621 184 aaKnown RBP6.09□□□□□ -1.43
PTCD3-211ENST00000476215 FDXRP22570 491 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 INHBEP58166 350 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 TCF15Q12870 199 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 RAB32Q13637 225 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 CYP2A13Q16696 494 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 KRTAP15-1Q3LI76 137 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 PREPLQ4J6C6 727 aaPredicted RBP6.09□□□□□ -1.43
PTCD3-211ENST00000476215 SLC44A4Q53GD3 710 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 C3orf38Q5JPI3 329 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 LY6G5CQ5SRR4 150 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 SYCP2LQ5T4T6 812 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 C11orf96Q7Z7L8 435 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 Q8NA96 180 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 PSD4Q8NDX1 1056 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 PARD3BQ8TEW8 1205 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 PHKBQ93100 1093 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 AGAP2Q99490 1192 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 MLST8Q9BVC4 326 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 TTYH3Q9C0H2 523 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 SMURF2Q9HAU4 748 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 CHST12Q9NRB3 414 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 XPR1Q9UBH6 696 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 AFF4Q9UHB7 1163 aaKnown RBP6.09□□□□□ -1.43
PTCD3-211ENST00000476215 DMRT1Q9Y5R6 373 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 COL4A3Q01955 1670 aa6.09□□□□□ -1.43
PTCD3-211ENST00000476215 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 PRAMEF33A0A0G2JMD5 474 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 PRAMEF10O60809 474 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 ZFPL1O95159 310 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 PROZP22891 400 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 BMPR1AP36894 532 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 PIK3CBP42338 1070 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 ANXA11P50995 505 aaKnown RBP6.08□□□□□ -1.44
PTCD3-211ENST00000476215 MC2RQ01718 297 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 FPGSQ05932 587 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 IFIT5Q13325 482 aaKnown RBP6.08□□□□□ -1.44
PTCD3-211ENST00000476215 HDAC1Q13547 482 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-211ENST00000476215 SMN1Q16637 294 aaKnown RBP6.08□□□□□ -1.44
PTCD3-211ENST00000476215 GEN1Q17RS7 908 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 CD300EQ496F6 205 aaPredicted RBP6.08□□□□□ -1.44
PTCD3-211ENST00000476215 ARMC6Q6NXE6 501 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 TAF2Q6P1X5 1199 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 SESTD1Q86VW0 696 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 POC1BQ8TC44 478 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 MAML1Q92585 1016 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 TMEM125Q96AQ2 219 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 NACC2Q96BF6 587 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 BOD1Q96IK1 185 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 SLC46A1Q96NT5 459 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 TBCBQ99426 244 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 ADAM2Q99965 735 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 SPATA5L1Q9BVQ7 753 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 ZNF518BQ9C0D4 1074 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 SMOC2Q9H3U7 446 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 GALNT9Q9HCQ5 603 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 SLC52A1Q9NWF4 448 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 HESX1Q9UBX0 185 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 RAD54BQ9Y620 910 aa6.08□□□□□ -1.44
PTCD3-211ENST00000476215 A0A087WWL8 130 aa6.07□□□□□ -1.44
PTCD3-211ENST00000476215 CENPVL1A0A0U1RR11 272 aa6.07□□□□□ -1.44
PTCD3-211ENST00000476215 A0A1W2PS29 197 aa6.07□□□□□ -1.44
PTCD3-211ENST00000476215 TRIM43BA6NCK2 446 aa6.07□□□□□ -1.44
PTCD3-211ENST00000476215 TMEM233B4DJY2 109 aa6.07□□□□□ -1.44
PTCD3-211ENST00000476215 KPNA5O15131 536 aa6.07□□□□□ -1.44
PTCD3-211ENST00000476215 LPXNO60711 386 aa6.07□□□□□ -1.44
PTCD3-211ENST00000476215 TOB1P50616 345 aaPredicted RBP6.07□□□□□ -1.44
PTCD3-211ENST00000476215 RPS7P62081 194 aaKnown RBP6.07□□□□□ -1.44
PTCD3-211ENST00000476215 RPS16P62249 146 aaKnown RBP6.07□□□□□ -1.44
PTCD3-211ENST00000476215 GUCY1B3Q02153 619 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms