RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 NOD2Q9HC29 1040 aa7.29□□□□□ -1.24
UBR4-212ENST00000475973 TMEM8AQ9HCN3 771 aa7.29□□□□□ -1.24
UBR4-212ENST00000475973 SSU72Q9NP77 194 aaKnown RBP7.29□□□□□ -1.24
UBR4-212ENST00000475973 UBE2TQ9NPD8 197 aaPredicted RBP7.29□□□□□ -1.24
UBR4-212ENST00000475973 CYLDQ9NQC7 956 aa7.29□□□□□ -1.24
UBR4-212ENST00000475973 HOMER3Q9NSC5 361 aa7.29□□□□□ -1.24
UBR4-212ENST00000475973 ANKEF1Q9NU02 776 aa7.29□□□□□ -1.24
UBR4-212ENST00000475973 FBXO28Q9NVF7 368 aa7.29□□□□□ -1.24
UBR4-212ENST00000475973 HSPBP1Q9NZL4 362 aa7.29□□□□□ -1.24
UBR4-212ENST00000475973 FLRT1Q9NZU1 646 aa7.29□□□□□ -1.24
UBR4-212ENST00000475973 LARSQ9P2J5 1176 aaKnown RBP7.29□□□□□ -1.24
UBR4-212ENST00000475973 PRKAG2Q9UGJ0 569 aa7.29□□□□□ -1.24
UBR4-212ENST00000475973 MTUS1Q9ULD2 1270 aa7.29□□□□□ -1.24
UBR4-212ENST00000475973 MRPL11Q9Y3B7 192 aaKnown RBP7.29□□□□□ -1.24
UBR4-212ENST00000475973 USP15Q9Y4E8 981 aaPredicted RBP7.29□□□□□ -1.24
UBR4-212ENST00000475973 UMODL1Q5DID0 1318 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 TCRBV5S1A1TA0A578 114 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 H0YHG0 523 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 IPO5O00410 1097 aaKnown RBP7.28□□□□□ -1.24
UBR4-212ENST00000475973 LIN7AO14910 233 aaPredicted RBP7.28□□□□□ -1.24
UBR4-212ENST00000475973 PRPF4O43172 522 aaKnown RBP eCLIP7.28□□□□□ -1.242e-6■■□□□ 13.8
UBR4-212ENST00000475973 TLL1O43897 1013 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 EXOC3O60645 756 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 GAS7O60861 476 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 ZBED4O75132 1171 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 ASMTLO95671 621 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 ECEL1O95672 775 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 RARBP10826 455 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 SYN1P17600 705 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 TAC1P20366 129 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 ABCB4P21439 1286 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 SCP2P22307 547 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 GCAP28676 217 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 HOXA13P31271 388 aaPredicted RBP7.28□□□□□ -1.24
UBR4-212ENST00000475973 BMP8BP34820 402 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 GCKP35557 465 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 STAT2P52630 851 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 OAZ1P54368 228 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 YARSP54577 528 aaKnown RBP7.28□□□□□ -1.24
UBR4-212ENST00000475973 MGAT5Q09328 741 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 CETN1Q12798 172 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 IKQ13123 557 aaPredicted RBP7.28□□□□□ -1.24
UBR4-212ENST00000475973 PARP6Q2NL67 630 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 ODF2Q5BJF6 829 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 SEL1L2Q5TEA6 688 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 KRT39Q6A163 491 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 SNRNP48Q6IEG0 339 aaKnown RBP7.28□□□□□ -1.24
UBR4-212ENST00000475973 PTCRAQ6ISU1 281 aaPredicted RBP7.28□□□□□ -1.24
UBR4-212ENST00000475973 HIBCHQ6NVY1 386 aaPredicted RBP7.28□□□□□ -1.24
UBR4-212ENST00000475973 SLC39A4Q6P5W5 647 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 CPNE8Q86YQ8 564 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 KSR1Q8IVT5 923 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 TPH2Q8IWU9 490 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 MCOLN2Q8IZK6 566 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 ZNF276Q8N554 614 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 UBR7Q8N806 425 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 CCDC63Q8NA47 563 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 TMEM161BQ8NDZ6 487 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 ATL2Q8NHH9 583 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 ZNF564Q8TBZ8 553 aaPredicted RBP7.28□□□□□ -1.24
UBR4-212ENST00000475973 EPS8L3Q8TE67 593 aaKnown RBP7.28□□□□□ -1.24
UBR4-212ENST00000475973 CHURC1Q8WUH1 139 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 MIEF2Q96C03 454 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 MAML3Q96JK9 1138 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 MAGEB18Q96M61 343 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 TMEM237Q96Q45 408 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 LBHD1Q9BQE6 289 aaPredicted RBP7.28□□□□□ -1.24
UBR4-212ENST00000475973 CBWD1Q9BRT8 395 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 LXNQ9BS40 222 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 TEKT3Q9BXF9 490 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 SENP6Q9GZR1 1112 aaPredicted RBP7.28□□□□□ -1.24
UBR4-212ENST00000475973 NSRP1Q9H0G5 558 aaKnown RBP7.28□□□□□ -1.24
UBR4-212ENST00000475973 PRO3102Q9H379 93 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 ZHX3Q9H4I2 956 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 EHMT1Q9H9B1 1298 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 PPCSQ9HAB8 311 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 RXFP1Q9HBX9 757 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 AGO4Q9HCK5 861 aaKnown RBP7.28□□□□□ -1.24
UBR4-212ENST00000475973 UBN1Q9NPG3 1134 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 BATF3Q9NR55 127 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 ABCF3Q9NUQ8 709 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 NINJ2Q9NZG7 142 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 CTTNBP2NLQ9P2B4 639 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 FBXO40Q9UH90 709 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 FEM1BQ9UK73 627 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 ZNF214Q9UL59 606 aaPredicted RBP7.28□□□□□ -1.24
UBR4-212ENST00000475973 ADAMTS5Q9UNA0 930 aa7.28□□□□□ -1.24
UBR4-212ENST00000475973 MROH7Q68CQ1 1323 aa7.27□□□□□ -1.24
UBR4-212ENST00000475973 ZNF236Q9UL36 1845 aa7.27□□□□□ -1.25
UBR4-212ENST00000475973 KIAA0100Q14667 2235 aaKnown RBP7.27□□□□□ -1.25
UBR4-212ENST00000475973 BACH1O14867 736 aa7.27□□□□□ -1.25
UBR4-212ENST00000475973 ATP2A1O14983 1001 aa7.27□□□□□ -1.25
UBR4-212ENST00000475973 PROSCO94903 275 aa7.27□□□□□ -1.25
UBR4-212ENST00000475973 UBOX5O94941 541 aa7.27□□□□□ -1.25
UBR4-212ENST00000475973 IL1BP01584 269 aa7.27□□□□□ -1.25
UBR4-212ENST00000475973 PIGRP01833 764 aa7.27□□□□□ -1.25
UBR4-212ENST00000475973 SKIP12755 728 aa7.27□□□□□ -1.25
UBR4-212ENST00000475973 KRT13P13646 458 aa7.27□□□□□ -1.25
UBR4-212ENST00000475973 AKR1A1P14550 325 aa7.27□□□□□ -1.25
UBR4-212ENST00000475973 ACO1P21399 889 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms