RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 WNT7BP56706 349 aa16.81■□□□□ 0.28
CPSF3-203ENST00000475482 HSP90AA4PQ58FG1 418 aa16.81■□□□□ 0.28
CPSF3-203ENST00000475482 CREBRFQ8IUR6 639 aa16.81■□□□□ 0.28
CPSF3-203ENST00000475482 ZSWIM2Q8NEG5 633 aa16.81■□□□□ 0.28
CPSF3-203ENST00000475482 ITFG1Q8TB96 612 aa16.81■□□□□ 0.28
CPSF3-203ENST00000475482 FGF13Q92913 245 aa16.81■□□□□ 0.28
CPSF3-203ENST00000475482 FAM212AQ96EL1 285 aa16.81■□□□□ 0.28
CPSF3-203ENST00000475482 BORCS6Q96GS4 357 aa16.81■□□□□ 0.28
CPSF3-203ENST00000475482 IL18RAPO95256 599 aa16.8■□□□□ 0.28
CPSF3-203ENST00000475482 LDHAP00338 332 aaKnown RBP16.8■□□□□ 0.28
CPSF3-203ENST00000475482 NR2F2P24468 414 aa16.8■□□□□ 0.28
CPSF3-203ENST00000475482 ELF1P32519 619 aa16.8■□□□□ 0.28
CPSF3-203ENST00000475482 HOXD13P35453 343 aa16.8■□□□□ 0.28
CPSF3-203ENST00000475482 NUBP1P53384 320 aa16.8■□□□□ 0.28
CPSF3-203ENST00000475482 ADAM9Q13443 819 aa16.8■□□□□ 0.28
CPSF3-203ENST00000475482 KRT31Q15323 416 aa16.8■□□□□ 0.28
CPSF3-203ENST00000475482 PABPC1LQ4VXU2 614 aaKnown RBP16.8■□□□□ 0.28
CPSF3-203ENST00000475482 POTEHQ6S545 545 aa16.8■□□□□ 0.28
CPSF3-203ENST00000475482 BRSK2Q8IWQ3 736 aa16.8■□□□□ 0.28
CPSF3-203ENST00000475482 ZC3H3Q8IXZ2 948 aaKnown RBP16.8■□□□□ 0.28
CPSF3-203ENST00000475482 PRSS33Q8NF86 280 aa16.8■□□□□ 0.28
CPSF3-203ENST00000475482 SENP8Q96LD8 212 aa16.8■□□□□ 0.28
CPSF3-203ENST00000475482 CNOT6LQ96LI5 555 aaKnown RBP16.8■□□□□ 0.28
CPSF3-203ENST00000475482 PRRX2Q99811 253 aa16.8■□□□□ 0.28
CPSF3-203ENST00000475482 CBWD1Q9BRT8 395 aa16.8■□□□□ 0.28
CPSF3-203ENST00000475482 IMPACTQ9P2X3 320 aa16.8■□□□□ 0.28
CPSF3-203ENST00000475482 WNT16Q9UBV4 365 aa16.8■□□□□ 0.28
CPSF3-203ENST00000475482 POLIQ9UNA4 740 aa16.8■□□□□ 0.28
CPSF3-203ENST00000475482 TIMM13Q9Y5L4 95 aaPredicted RBP16.8■□□□□ 0.28
CPSF3-203ENST00000475482 INSL5Q9Y5Q6 135 aa16.8■□□□□ 0.28
CPSF3-203ENST00000475482 A0A1B0GTH6 734 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 OR6C75A6NL08 312 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 SLC16A3O15427 465 aaKnown RBP16.79■□□□□ 0.28
CPSF3-203ENST00000475482 NARSO43776 548 aaKnown RBP16.79■□□□□ 0.28
CPSF3-203ENST00000475482 MICAL2O94851 1124 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 NR3C1P04150 777 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 RHOP08100 348 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 SRFP11831 508 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 NPR3P17342 541 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 PTPN2P17706 415 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 COPB1P53618 953 aaKnown RBP16.79■□□□□ 0.28
CPSF3-203ENST00000475482 ARPP19P56211 112 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 ADCY1Q08828 1119 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 GPR17Q13304 367 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 SLC5A9Q2M3M2 681 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 CCDC40Q4G0X9 1142 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 PRSS36Q5K4E3 855 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 DSTYKQ6XUX3 929 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 RNF19BQ6ZMZ0 732 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 NPAS3Q8IXF0 933 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 CXorf38Q8TB03 319 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 TMEM174Q8WUU8 243 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 FGF14Q92915 247 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 FAM213AQ9BRX8 229 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 TUBGCP2Q9BSJ2 902 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 CYP4F11Q9HBI6 524 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 METTL14Q9HCE5 456 aaKnown RBP16.79■□□□□ 0.28
CPSF3-203ENST00000475482 DPP3Q9NY33 737 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 FRMD4BQ9Y2L6 1034 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 NUMBLQ9Y6R0 609 aa16.79■□□□□ 0.28
CPSF3-203ENST00000475482 PRRG1O14668 218 aa16.78■□□□□ 0.28
CPSF3-203ENST00000475482 KIAA0391O15091 583 aaKnown RBP16.78■□□□□ 0.28
CPSF3-203ENST00000475482 EXTL3O43909 919 aa16.78■□□□□ 0.28
CPSF3-203ENST00000475482 LRG1P02750 347 aa16.78■□□□□ 0.28
CPSF3-203ENST00000475482 EPB41P11171 864 aaKnown RBP16.78■□□□□ 0.28
CPSF3-203ENST00000475482 HOXD11P31277 338 aaPredicted RBP16.78■□□□□ 0.28
CPSF3-203ENST00000475482 CLCN5P51795 746 aa16.78■□□□□ 0.28
CPSF3-203ENST00000475482 EPHA5P54756 1037 aa16.78■□□□□ 0.28
CPSF3-203ENST00000475482 NHLH1Q02575 133 aa16.78■□□□□ 0.28
CPSF3-203ENST00000475482 TCF15Q12870 199 aa16.78■□□□□ 0.28
CPSF3-203ENST00000475482 NR1I3Q14994 352 aa16.78■□□□□ 0.28
CPSF3-203ENST00000475482 HS1BP3Q53T59 392 aa16.78■□□□□ 0.28
CPSF3-203ENST00000475482 CWF19L1Q69YN2 538 aaKnown RBP16.78■□□□□ 0.28
CPSF3-203ENST00000475482 OVOS1Q6IE37 1185 aa16.78■□□□□ 0.28
CPSF3-203ENST00000475482 IRF2BP1Q8IU81 584 aa16.78■□□□□ 0.28
CPSF3-203ENST00000475482 SLC9A9Q8IVB4 645 aa16.78■□□□□ 0.28
CPSF3-203ENST00000475482 SAAL1Q96ER3 474 aa16.78■□□□□ 0.28
CPSF3-203ENST00000475482 MKNK1Q9BUB5 465 aa16.78■□□□□ 0.28
CPSF3-203ENST00000475482 RPP25Q9BUL9 199 aaKnown RBP16.78■□□□□ 0.28
CPSF3-203ENST00000475482 SLC2A4RGQ9NR83 387 aa16.78■□□□□ 0.28
CPSF3-203ENST00000475482 TGFB1I1O43294 461 aa16.77■□□□□ 0.28
CPSF3-203ENST00000475482 ODC1P11926 461 aa16.77■□□□□ 0.28
CPSF3-203ENST00000475482 TAF6P49848 677 aa16.77■□□□□ 0.28
CPSF3-203ENST00000475482 MARSP56192 900 aaKnown RBP16.77■□□□□ 0.28
CPSF3-203ENST00000475482 GSDMDP57764 484 aa16.77■□□□□ 0.28
CPSF3-203ENST00000475482 MAN2A1Q16706 1144 aa16.77■□□□□ 0.28
CPSF3-203ENST00000475482 FKBP15Q5T1M5 1219 aa16.77■□□□□ 0.28
CPSF3-203ENST00000475482 ASTLQ6HA08 431 aaPredicted RBP16.77■□□□□ 0.28
CPSF3-203ENST00000475482 PARM1Q6UWI2 310 aa16.77■□□□□ 0.28
CPSF3-203ENST00000475482 MTSS1LQ765P7 747 aa16.77■□□□□ 0.28
CPSF3-203ENST00000475482 FRMD5Q7Z6J6 570 aa16.77■□□□□ 0.28
CPSF3-203ENST00000475482 USP37Q86T82 979 aa16.77■□□□□ 0.28
CPSF3-203ENST00000475482 C12orf56Q8IXR9 622 aa16.77■□□□□ 0.28
CPSF3-203ENST00000475482 TMEM105Q8N8V8 129 aa16.77■□□□□ 0.28
CPSF3-203ENST00000475482 NAP1L5Q96NT1 182 aaPredicted RBP16.77■□□□□ 0.28
CPSF3-203ENST00000475482 CRISPLD1Q9H336 500 aa16.77■□□□□ 0.28
CPSF3-203ENST00000475482 RTN4Q9NQC3 1192 aaKnown RBP16.77■□□□□ 0.28
CPSF3-203ENST00000475482 AGPAT3Q9NRZ7 376 aa16.77■□□□□ 0.28
CPSF3-203ENST00000475482 GDE1Q9NZC3 331 aa16.77■□□□□ 0.28
CPSF3-203ENST00000475482 CEP72Q9P209 647 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms