RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 C9orf57Q5W0N0 161 aa22.14■■□□□ 1.13
VPS36-203ENST00000475375 TRIM68Q6AZZ1 485 aa22.14■■□□□ 1.13
VPS36-203ENST00000475375 CC2D1AQ6P1N0 951 aaPredicted RBP22.14■■□□□ 1.13
VPS36-203ENST00000475375 CD302Q8IX05 232 aa22.14■■□□□ 1.13
VPS36-203ENST00000475375 THEM5Q8N1Q8 247 aa22.14■■□□□ 1.13
VPS36-203ENST00000475375 MAB21L3Q8N8X9 362 aa22.14■■□□□ 1.13
VPS36-203ENST00000475375 ZCWPW1Q9H0M4 648 aa22.14■■□□□ 1.13
VPS36-203ENST00000475375 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.14■■□□□ 1.13
VPS36-203ENST00000475375 ABI2Q9NYB9 513 aaPredicted RBP22.14■■□□□ 1.13
VPS36-203ENST00000475375 TBX20Q9UMR3 447 aa22.14■■□□□ 1.13
VPS36-203ENST00000475375 GREB1Q4ZG55 1949 aa22.14■■□□□ 1.13
VPS36-203ENST00000475375 EIF5BO60841 1220 aaKnown RBP22.13■■□□□ 1.13
VPS36-203ENST00000475375 NFICP08651 508 aa22.13■■□□□ 1.13
VPS36-203ENST00000475375 MPLP40238 635 aa22.13■■□□□ 1.13
VPS36-203ENST00000475375 HYIQ5T013 277 aa22.13■■□□□ 1.13
VPS36-203ENST00000475375 MCTP1Q6DN14 999 aa22.13■■□□□ 1.13
VPS36-203ENST00000475375 ZSCAN31Q96LW9 406 aaPredicted RBP22.13■■□□□ 1.13
VPS36-203ENST00000475375 FAM83CQ9BQN1 747 aa22.13■■□□□ 1.13
VPS36-203ENST00000475375 PYM1Q9BRP8 204 aaKnown RBP22.13■■□□□ 1.13
VPS36-203ENST00000475375 HPS4Q9NQG7 708 aa22.13■■□□□ 1.13
VPS36-203ENST00000475375 POLR3BQ9NW08 1133 aaPredicted RBP22.13■■□□□ 1.13
VPS36-203ENST00000475375 CCL26Q9Y258 94 aa22.13■■□□□ 1.13
VPS36-203ENST00000475375 PCDHGA5Q9Y5G8 931 aa22.13■■□□□ 1.13
VPS36-203ENST00000475375 KIF26AQ9ULI4 1882 aaPredicted RBP22.13■■□□□ 1.13
VPS36-203ENST00000475375 SPAG17Q6Q759 2223 aa22.12■■□□□ 1.13
VPS36-203ENST00000475375 CEP295Q9C0D2 2601 aa22.12■■□□□ 1.13
VPS36-203ENST00000475375 LAMA1P25391 3075 aa22.12■■□□□ 1.13
VPS36-203ENST00000475375 VWA3AA6NCI4 1184 aa22.12■■□□□ 1.13
VPS36-203ENST00000475375 CYB561D2O14569 222 aa22.12■■□□□ 1.13
VPS36-203ENST00000475375 TM4SF5O14894 197 aa22.12■■□□□ 1.13
VPS36-203ENST00000475375 FAM189A1O60320 539 aa22.12■■□□□ 1.13
VPS36-203ENST00000475375 RNF40O75150 1001 aa22.12■■□□□ 1.13
VPS36-203ENST00000475375 EGFP01133 1207 aa22.12■■□□□ 1.13
VPS36-203ENST00000475375 CYP11A1P05108 521 aa22.12■■□□□ 1.13
VPS36-203ENST00000475375 NMT1P30419 496 aaKnown RBP22.12■■□□□ 1.13
VPS36-203ENST00000475375 AMPD2Q01433 879 aa22.12■■□□□ 1.13
VPS36-203ENST00000475375 DHX8Q14562 1220 aaKnown RBP22.12■■□□□ 1.13
VPS36-203ENST00000475375 RNF43Q68DV7 783 aa22.12■■□□□ 1.13
VPS36-203ENST00000475375 KCTD17Q8N5Z5 321 aa22.12■■□□□ 1.13
VPS36-203ENST00000475375 MYCT1Q8N699 235 aa22.12■■□□□ 1.13
VPS36-203ENST00000475375 TTC16Q8NEE8 873 aa22.12■■□□□ 1.13
VPS36-203ENST00000475375 HHIPQ96QV1 700 aa22.12■■□□□ 1.13
VPS36-203ENST00000475375 ZMYM5Q9UJ78 669 aa22.12■■□□□ 1.13
VPS36-203ENST00000475375 A0A0B4J269 797 aa22.11■■□□□ 1.13
VPS36-203ENST00000475375 PIRO00625 290 aa22.11■■□□□ 1.13
VPS36-203ENST00000475375 TRDMT1O14717 391 aaKnown RBP22.11■■□□□ 1.13
VPS36-203ENST00000475375 AKAP3O75969 853 aa22.11■■□□□ 1.13
VPS36-203ENST00000475375 FAM13AO94988 1023 aa22.11■■□□□ 1.13
VPS36-203ENST00000475375 ADRB2P07550 413 aa22.11■■□□□ 1.13
VPS36-203ENST00000475375 HAPLN1P10915 354 aaPredicted RBP22.11■■□□□ 1.13
VPS36-203ENST00000475375 ARSAP15289 507 aa22.11■■□□□ 1.13
VPS36-203ENST00000475375 SHC2P98077 582 aa22.11■■□□□ 1.13
VPS36-203ENST00000475375 ELF2Q15723 593 aa22.11■■□□□ 1.13
VPS36-203ENST00000475375 ARSHQ5FYA8 562 aa22.11■■□□□ 1.13
VPS36-203ENST00000475375 GPBP1Q86WP2 473 aa22.11■■□□□ 1.13
VPS36-203ENST00000475375 SPPL2BQ8TCT7 592 aa22.11■■□□□ 1.13
VPS36-203ENST00000475375 C2orf15Q8WU43 125 aaKnown RBP22.11■■□□□ 1.13
VPS36-203ENST00000475375 USP13Q92995 863 aaPredicted RBP22.11■■□□□ 1.13
VPS36-203ENST00000475375 REEP2Q9BRK0 252 aa22.11■■□□□ 1.13
VPS36-203ENST00000475375 SH2B1Q9NRF2 756 aaPredicted RBP22.11■■□□□ 1.13
VPS36-203ENST00000475375 VPS45Q9NRW7 570 aa22.11■■□□□ 1.13
VPS36-203ENST00000475375 TDP1Q9NUW8 608 aa22.11■■□□□ 1.13
VPS36-203ENST00000475375 CPSF3Q9UKF6 684 aaKnown RBP22.11■■□□□ 1.13
VPS36-203ENST00000475375 ODF2LQ9ULJ1 636 aa22.11■■□□□ 1.13
VPS36-203ENST00000475375 MAGED2Q9UNF1 606 aaPredicted RBP22.11■■□□□ 1.13
VPS36-203ENST00000475375 FRYQ5TBA9 3013 aa22.11■■□□□ 1.13
VPS36-203ENST00000475375 OTOL1A6NHN0 477 aaPredicted RBP22.1■■□□□ 1.13
VPS36-203ENST00000475375 TULP1O00294 542 aaPredicted RBP22.1■■□□□ 1.13
VPS36-203ENST00000475375 KCNK5O95279 499 aa22.1■■□□□ 1.13
VPS36-203ENST00000475375 PIGRP01833 764 aa22.1■■□□□ 1.13
VPS36-203ENST00000475375 NLRP12P59046 1061 aa22.1■■□□□ 1.13
VPS36-203ENST00000475375 ATP2C1P98194 919 aaPredicted RBP22.1■■□□□ 1.13
VPS36-203ENST00000475375 SMARCB1Q12824 385 aa22.1■■□□□ 1.13
VPS36-203ENST00000475375 PLA2G2CQ5R387 149 aa22.1■■□□□ 1.13
VPS36-203ENST00000475375 TCEAL6Q6IPX3 200 aa22.1■■□□□ 1.13
VPS36-203ENST00000475375 CAMKK1Q8N5S9 505 aa22.1■■□□□ 1.13
VPS36-203ENST00000475375 MRPS31Q92665 395 aaKnown RBP22.1■■□□□ 1.13
VPS36-203ENST00000475375 TCEAL3Q969E4 200 aa22.1■■□□□ 1.13
VPS36-203ENST00000475375 ZHX3Q9H4I2 956 aa22.1■■□□□ 1.13
VPS36-203ENST00000475375 KIF9Q9HAQ2 790 aa22.1■■□□□ 1.13
VPS36-203ENST00000475375 DERAQ9Y315 318 aa22.1■■□□□ 1.13
VPS36-203ENST00000475375 ANO9A1A5B4 782 aa22.09■■□□□ 1.13
VPS36-203ENST00000475375 KRT18P05783 430 aaKnown RBP22.09■■□□□ 1.13
VPS36-203ENST00000475375 DRD1P21728 446 aa22.09■■□□□ 1.13
VPS36-203ENST00000475375 DDX6P26196 483 aaKnown RBP eCLIP22.09■■□□□ 1.13
VPS36-203ENST00000475375 ACOT2P49753 483 aa22.09■■□□□ 1.13
VPS36-203ENST00000475375 TAF6P49848 677 aa22.09■■□□□ 1.13
VPS36-203ENST00000475375 CREB5Q02930 508 aa22.09■■□□□ 1.13
VPS36-203ENST00000475375 PLK5Q496M5 336 aa22.09■■□□□ 1.13
VPS36-203ENST00000475375 TMEM119Q4V9L6 283 aa22.09■■□□□ 1.13
VPS36-203ENST00000475375 WSCD1Q658N2 575 aa22.09■■□□□ 1.13
VPS36-203ENST00000475375 TXNDC8Q6A555 127 aa22.09■■□□□ 1.13
VPS36-203ENST00000475375 PSAPL1Q6NUJ1 521 aa22.09■■□□□ 1.13
VPS36-203ENST00000475375 LRRTM3Q86VH5 581 aa22.09■■□□□ 1.13
VPS36-203ENST00000475375 DCP1BQ8IZD4 617 aaKnown RBP22.09■■□□□ 1.13
VPS36-203ENST00000475375 EXOC4Q96A65 974 aa22.09■■□□□ 1.13
VPS36-203ENST00000475375 ZC3H10Q96K80 434 aaKnown RBP22.09■■□□□ 1.13
VPS36-203ENST00000475375 P2RY13Q9BPV8 354 aa22.09■■□□□ 1.13
VPS36-203ENST00000475375 EDEM2Q9BV94 578 aa22.09■■□□□ 1.13
VPS36-203ENST00000475375 LSM14BQ9BX40 385 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms