RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 ATOH1Q92858 354 aaPredicted RBP13.19□□□□□ -0.3
SSR1-205ENST00000475213 ANKRD36BP1Q96IX9 119 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 ASB16Q96NS5 453 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 SLC39A2Q9NP94 309 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 AGPAT3Q9NRZ7 376 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 FAM86C1Q9NVL1 165 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 INTS13Q9NVM9 706 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 CACNA1IQ9P0X4 2223 aa13.19□□□□□ -0.3
SSR1-205ENST00000475213 DMDP11532 3685 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 PTPRJQ12913 1337 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 A0A1B0GVL5 298 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 CLIC2O15247 247 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 KLRC4O43908 158 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 KRT19P08727 400 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 PFKFB1P16118 471 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 CMA1P23946 247 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 STARD6P59095 220 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 KRT85P78386 507 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 RBP5P82980 135 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 BFSP1Q12934 665 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 SURF1Q15526 300 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 TEAD2Q15562 447 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 BMT2Q1RMZ1 405 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 SLC44A4Q53GD3 710 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 DNAJB7Q7Z6W7 309 aaPredicted RBP13.18□□□□□ -0.3
SSR1-205ENST00000475213 CCDC105Q8IYK2 499 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 RDH13Q8NBN7 331 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 OR5B17Q8NGF7 314 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 C2orf15Q8WU43 125 aaKnown RBP13.18□□□□□ -0.3
SSR1-205ENST00000475213 PSMG2Q969U7 264 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 PAGE5Q96GU1 130 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 SPATA32Q96LK8 384 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 SEPT5Q99719 369 aaPredicted RBP13.18□□□□□ -0.3
SSR1-205ENST00000475213 KIAA1586Q9HCI6 787 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 ZFP14Q9HCL3 533 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 GDAP2Q9NXN4 497 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 L1RE1Q9UN81 338 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 ASB3Q9Y575 518 aa13.18□□□□□ -0.3
SSR1-205ENST00000475213 NUP210Q8TEM1 1887 aaPredicted RBP13.18□□□□□ -0.3
SSR1-205ENST00000475213 ZNF638Q14966 1978 aaKnown RBP13.18□□□□□ -0.3
SSR1-205ENST00000475213 F5P12259 2224 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 TICRRQ7Z2Z1 1910 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 A0A1W2PRU2 124 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 HUS1O60921 280 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 DCNP07585 359 aaKnown RBP13.17□□□□□ -0.3
SSR1-205ENST00000475213 TUFMP49411 452 aaKnown RBP13.17□□□□□ -0.3
SSR1-205ENST00000475213 CYP2J2P51589 502 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 SNRPFP62306 86 aaKnown RBP13.17□□□□□ -0.3
SSR1-205ENST00000475213 PFKPQ01813 784 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 SMARCB1Q12824 385 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 MLF2Q15773 248 aaPredicted RBP13.17□□□□□ -0.3
SSR1-205ENST00000475213 SNRNP35Q16560 246 aaKnown RBP13.17□□□□□ -0.3
SSR1-205ENST00000475213 DUOXA2Q1HG44 320 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 MGAT5BQ3V5L5 792 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 ITIH5Q86UX2 942 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 DCP1BQ8IZD4 617 aaKnown RBP13.17□□□□□ -0.3
SSR1-205ENST00000475213 TMEM86AQ8N2M4 240 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 DTWD2Q8NBA8 298 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 ZSCAN18Q8TBC5 510 aaPredicted RBP13.17□□□□□ -0.3
SSR1-205ENST00000475213 SPPL2BQ8TCT7 592 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 SMARCD2Q92925 531 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 SHDQ96IW2 340 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 LPIN3Q9BQK8 851 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 FOXQ1Q9C009 403 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 ZNF334Q9HCZ1 680 aaPredicted RBP13.17□□□□□ -0.3
SSR1-205ENST00000475213 TMLHEQ9NVH6 421 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 DDX43Q9NXZ2 648 aaKnown RBP13.17□□□□□ -0.3
SSR1-205ENST00000475213 HPSEQ9Y251 543 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 SIT1Q9Y3P8 196 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 SNX9Q9Y5X1 595 aa13.17□□□□□ -0.3
SSR1-205ENST00000475213 OBSL1O75147 1896 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 ZFHX2Q9C0A1 2572 aaPredicted RBP13.16□□□□□ -0.3
SSR1-205ENST00000475213 TNNC2P02585 160 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 HAPLN1P10915 354 aaPredicted RBP13.16□□□□□ -0.3
SSR1-205ENST00000475213 ATF6P18850 670 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 VIPR2P41587 438 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 TSPY1Q01534 308 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 PRKCQQ04759 706 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 CYP24A1Q07973 514 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 STK4Q13043 487 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 GRM2Q14416 872 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 KNOP1Q1ED39 458 aaKnown RBP13.16□□□□□ -0.3
SSR1-205ENST00000475213 STXBP5Q5T5C0 1151 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 VITQ6UXI7 678 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 GAREM2Q75VX8 874 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 HS2ST1Q7LGA3 356 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 OSTM1Q86WC4 334 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 WDR49Q8IV35 697 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 TOP6BLQ8N6T0 577 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 XXYLT1Q8NBI6 393 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 PJA1Q8NG27 643 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 FAM200AQ8TCP9 573 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 ACBD6Q9BR61 282 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 DDX23Q9BUQ8 820 aaKnown RBP13.16□□□□□ -0.3
SSR1-205ENST00000475213 GPR88Q9GZN0 384 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 SLITRK6Q9H5Y7 841 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 TRPV4Q9HBA0 871 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 ABI2Q9NYB9 513 aaPredicted RBP13.16□□□□□ -0.3
SSR1-205ENST00000475213 DLGAP2Q9P1A6 1054 aa13.16□□□□□ -0.3
SSR1-205ENST00000475213 CGNQ9P2M7 1197 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms