RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 WDR72Q3MJ13 1102 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 PABPC1LQ4VXU2 614 aaKnown RBP17.66■□□□□ 0.42
ATG4B-216ENST00000475195 SLC39A12Q504Y0 691 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 ISM2Q6H9L7 571 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 FAM171BQ6P995 826 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 ADGRF2Q8IZF7 708 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 TRIML1Q8N9V2 468 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 TAF4BQ92750 862 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 NXPE3Q969Y0 559 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 ZNF512Q96ME7 567 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-216ENST00000475195 LRRC3Q9BY71 257 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 C11orf16Q9NQ32 467 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 LMBRD1Q9NUN5 540 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 IGSF9Q9P2J2 1179 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 POLIQ9UNA4 740 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 SLC27A5Q9Y2P5 690 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 YIPF1Q9Y548 306 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 ASB3Q9Y575 518 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 ANHXE9PGG2 379 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 PSMA7O14818 248 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 PHACTR2O75167 634 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 RHOP08100 348 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 LMO2P25791 158 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 PCSK1P29120 753 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 GTF2H1P32780 548 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 PLD1Q13393 1074 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 STIM1Q13586 685 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 NCOA4Q13772 614 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 NFE2Q16621 373 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-216ENST00000475195 INTS6LQ5JSJ4 861 aaKnown RBP17.65■□□□□ 0.42
ATG4B-216ENST00000475195 PRSS36Q5K4E3 855 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 LEMD2Q8NC56 503 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 ITFG1Q8TB96 612 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 TSG101Q99816 390 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 DNAJC25Q9H1X3 360 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 KCNK12Q9HB15 430 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 TMLHEQ9NVH6 421 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 CDH7Q9ULB5 785 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 SORCS3Q9UPU3 1222 aa17.65■□□□□ 0.42
ATG4B-216ENST00000475195 ZNF197O14709 1029 aa17.64■□□□□ 0.41
ATG4B-216ENST00000475195 SLC16A3O15427 465 aaKnown RBP17.64■□□□□ 0.41
ATG4B-216ENST00000475195 ASS1P00966 412 aaKnown RBP17.64■□□□□ 0.41
ATG4B-216ENST00000475195 HAPLN1P10915 354 aaPredicted RBP17.64■□□□□ 0.41
ATG4B-216ENST00000475195 KRT13P13646 458 aa17.64■□□□□ 0.41
ATG4B-216ENST00000475195 GBP2P32456 591 aaPredicted RBP17.64■□□□□ 0.41
ATG4B-216ENST00000475195 ALDH1A3P47895 512 aa17.64■□□□□ 0.41
ATG4B-216ENST00000475195 EPHB3P54753 998 aa17.64■□□□□ 0.41
ATG4B-216ENST00000475195 TSPY1Q01534 308 aa17.64■□□□□ 0.41
ATG4B-216ENST00000475195 PPP3CAQ08209 521 aa17.64■□□□□ 0.41
ATG4B-216ENST00000475195 BIRC3Q13489 604 aa17.64■□□□□ 0.41
ATG4B-216ENST00000475195 IQCEQ6IPM2 695 aa17.64■□□□□ 0.41
ATG4B-216ENST00000475195 POTEHQ6S545 545 aa17.64■□□□□ 0.41
ATG4B-216ENST00000475195 ELMOD1Q8N336 334 aa17.64■□□□□ 0.41
ATG4B-216ENST00000475195 FGF13Q92913 245 aa17.64■□□□□ 0.41
ATG4B-216ENST00000475195 EEF2KMTQ96G04 330 aa17.64■□□□□ 0.41
ATG4B-216ENST00000475195 MMS19Q96T76 1030 aa17.64■□□□□ 0.41
ATG4B-216ENST00000475195 ABCB6Q9NP58 842 aa17.64■□□□□ 0.41
ATG4B-216ENST00000475195 GTF3C4Q9UKN8 822 aa17.64■□□□□ 0.41
ATG4B-216ENST00000475195 CDH9Q9ULB4 789 aa17.64■□□□□ 0.41
ATG4B-216ENST00000475195 NME7Q9Y5B8 376 aa17.64■□□□□ 0.41
ATG4B-216ENST00000475195 TRIM49BA6NDI0 452 aa17.63■□□□□ 0.41
ATG4B-216ENST00000475195 GNL1P36915 607 aaPredicted RBP17.63■□□□□ 0.41
ATG4B-216ENST00000475195 TNNC1P63316 161 aa17.63■□□□□ 0.41
ATG4B-216ENST00000475195 CAMK4Q16566 473 aa17.63■□□□□ 0.41
ATG4B-216ENST00000475195 SLC5A9Q2M3M2 681 aa17.63■□□□□ 0.41
ATG4B-216ENST00000475195 CFAP221Q4G0U5 840 aa17.63■□□□□ 0.41
ATG4B-216ENST00000475195 TTI2Q6NXR4 508 aa17.63■□□□□ 0.41
ATG4B-216ENST00000475195 FILIP1Q7Z7B0 1213 aa17.63■□□□□ 0.41
ATG4B-216ENST00000475195 TTC9BQ8N6N2 239 aa17.63■□□□□ 0.41
ATG4B-216ENST00000475195 PSMG2Q969U7 264 aa17.63■□□□□ 0.41
ATG4B-216ENST00000475195 FUBP3Q96I24 572 aaKnown RBP eCLIP17.63■□□□□ 0.41
ATG4B-216ENST00000475195 CEP63Q96MT8 703 aa17.63■□□□□ 0.41
ATG4B-216ENST00000475195 DUSP9Q99956 384 aaKnown RBP17.63■□□□□ 0.41
ATG4B-216ENST00000475195 CORO1BQ9BR76 489 aa17.63■□□□□ 0.41
ATG4B-216ENST00000475195 MRPL45Q9BRJ2 306 aaKnown RBP17.63■□□□□ 0.41
ATG4B-216ENST00000475195 TMEM8AQ9HCN3 771 aa17.63■□□□□ 0.41
ATG4B-216ENST00000475195 GDE1Q9NZC3 331 aa17.63■□□□□ 0.41
ATG4B-216ENST00000475195 MRPS23Q9Y3D9 190 aaKnown RBP17.63■□□□□ 0.41
ATG4B-216ENST00000475195 PCDHB5Q9Y5E4 795 aa17.63■□□□□ 0.41
ATG4B-216ENST00000475195 MYBPHLA2RUH7 354 aa17.62■□□□□ 0.41
ATG4B-216ENST00000475195 HCRTO43612 131 aa17.62■□□□□ 0.41
ATG4B-216ENST00000475195 MOSPD3O75425 235 aa17.62■□□□□ 0.41
ATG4B-216ENST00000475195 TRIM49P0CI25 452 aa17.62■□□□□ 0.41
ATG4B-216ENST00000475195 TRIM49CP0CI26 452 aa17.62■□□□□ 0.41
ATG4B-216ENST00000475195 EPB41P11171 864 aaKnown RBP17.62■□□□□ 0.41
ATG4B-216ENST00000475195 ACAT1P24752 427 aaKnown RBP17.62■□□□□ 0.41
ATG4B-216ENST00000475195 CCR2P41597 374 aa17.62■□□□□ 0.41
ATG4B-216ENST00000475195 GCLMP48507 274 aa17.62■□□□□ 0.41
ATG4B-216ENST00000475195 ZNF667Q5HYK9 610 aa17.62■□□□□ 0.41
ATG4B-216ENST00000475195 CYP4A22Q5TCH4 519 aa17.62■□□□□ 0.41
ATG4B-216ENST00000475195 TRIM67Q6ZTA4 783 aa17.62■□□□□ 0.41
ATG4B-216ENST00000475195 GET4Q7L5D6 327 aaPredicted RBP17.62■□□□□ 0.41
ATG4B-216ENST00000475195 DNAJB7Q7Z6W7 309 aaPredicted RBP17.62■□□□□ 0.41
ATG4B-216ENST00000475195 TMC8Q8IU68 726 aa17.62■□□□□ 0.41
ATG4B-216ENST00000475195 NPAS3Q8IXF0 933 aa17.62■□□□□ 0.41
ATG4B-216ENST00000475195 UBALD2Q8IYN6 164 aa17.62■□□□□ 0.41
ATG4B-216ENST00000475195 HS6ST3Q8IZP7 471 aa17.62■□□□□ 0.41
ATG4B-216ENST00000475195 SLC44A3Q8N4M1 653 aa17.62■□□□□ 0.41
ATG4B-216ENST00000475195 FAXDC2Q96IV6 333 aa17.62■□□□□ 0.41
ATG4B-216ENST00000475195 CLSTN2Q9H4D0 955 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms