RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 SLC26A4O43511 780 aa16.89■□□□□ 0.29
SRRT-209ENST00000474896 PRAMEF12O95522 483 aa16.89■□□□□ 0.29
SRRT-209ENST00000474896 KRT18P05783 430 aaKnown RBP16.89■□□□□ 0.29
SRRT-209ENST00000474896 CDC25CP30307 473 aa16.89■□□□□ 0.29
SRRT-209ENST00000474896 NMT1P30419 496 aaKnown RBP16.89■□□□□ 0.29
SRRT-209ENST00000474896 ZNF131P52739 623 aa16.89■□□□□ 0.29
SRRT-209ENST00000474896 GTF2BQ00403 316 aa16.89■□□□□ 0.29
SRRT-209ENST00000474896 PLCB2Q00722 1185 aa16.89■□□□□ 0.29
SRRT-209ENST00000474896 CCINQ13939 588 aa16.89■□□□□ 0.29
SRRT-209ENST00000474896 PRR23CQ6ZRP0 262 aa16.89■□□□□ 0.29
SRRT-209ENST00000474896 CEP68Q76N32 757 aa16.89■□□□□ 0.29
SRRT-209ENST00000474896 LRRTM3Q86VH5 581 aa16.89■□□□□ 0.29
SRRT-209ENST00000474896 THEM5Q8N1Q8 247 aa16.89■□□□□ 0.29
SRRT-209ENST00000474896 SYNPOQ8N3V7 929 aa16.89■□□□□ 0.29
SRRT-209ENST00000474896 SPRYD3Q8NCJ5 442 aa16.89■□□□□ 0.29
SRRT-209ENST00000474896 PYM1Q9BRP8 204 aaKnown RBP16.89■□□□□ 0.29
SRRT-209ENST00000474896 IL21Q9HBE4 155 aa16.89■□□□□ 0.29
SRRT-209ENST00000474896 GKN1Q9NS71 199 aa16.89■□□□□ 0.29
SRRT-209ENST00000474896 BLOC1S4Q9NUP1 217 aa16.89■□□□□ 0.29
SRRT-209ENST00000474896 SDK1Q7Z5N4 2213 aa16.89■□□□□ 0.29
SRRT-209ENST00000474896 SCN1AP35498 2009 aa16.89■□□□□ 0.29
SRRT-209ENST00000474896 GDF9O60383 454 aa16.88■□□□□ 0.29
SRRT-209ENST00000474896 KRT37O76014 449 aa16.88■□□□□ 0.29
SRRT-209ENST00000474896 ATF6P18850 670 aa16.88■□□□□ 0.29
SRRT-209ENST00000474896 HOXA6P31267 233 aa16.88■□□□□ 0.29
SRRT-209ENST00000474896 ITPRIPL2Q3MIP1 535 aa16.88■□□□□ 0.29
SRRT-209ENST00000474896 ZC2HC1CQ53FD0 456 aaPredicted RBP16.88■□□□□ 0.29
SRRT-209ENST00000474896 PPM1JQ5JR12 505 aa16.88■□□□□ 0.29
SRRT-209ENST00000474896 ADALQ6DHV7 355 aa16.88■□□□□ 0.29
SRRT-209ENST00000474896 WDR5BQ86VZ2 330 aa16.88■□□□□ 0.29
SRRT-209ENST00000474896 FAM160A2Q8N612 972 aaPredicted RBP16.88■□□□□ 0.29
SRRT-209ENST00000474896 GCNAQ96QF7 691 aa16.88■□□□□ 0.29
SRRT-209ENST00000474896 FIZ1Q96SL8 496 aa16.88■□□□□ 0.29
SRRT-209ENST00000474896 ASB7Q9H672 318 aa16.88■□□□□ 0.29
SRRT-209ENST00000474896 DPP3Q9NY33 737 aa16.88■□□□□ 0.29
SRRT-209ENST00000474896 NUP210Q8TEM1 1887 aaPredicted RBP16.87■□□□□ 0.29
SRRT-209ENST00000474896 KIF26AQ9ULI4 1882 aaPredicted RBP16.87■□□□□ 0.29
SRRT-209ENST00000474896 TISP43B9A030 160 aa16.87■□□□□ 0.29
SRRT-209ENST00000474896 EXTL3O43909 919 aa16.87■□□□□ 0.29
SRRT-209ENST00000474896 ADRB1P08588 477 aa16.87■□□□□ 0.29
SRRT-209ENST00000474896 HAPLN1P10915 354 aaPredicted RBP16.87■□□□□ 0.29
SRRT-209ENST00000474896 PLCG1P19174 1290 aa16.87■□□□□ 0.29
SRRT-209ENST00000474896 TAF6P49848 677 aa16.87■□□□□ 0.29
SRRT-209ENST00000474896 KARSQ15046 597 aaKnown RBP16.87■□□□□ 0.29
SRRT-209ENST00000474896 PTPAQ15257 358 aa16.87■□□□□ 0.29
SRRT-209ENST00000474896 WSCD1Q658N2 575 aa16.87■□□□□ 0.29
SRRT-209ENST00000474896 SLFN12LQ6IEE8 588 aa16.87■□□□□ 0.29
SRRT-209ENST00000474896 CMTM8Q8IZV2 173 aa16.87■□□□□ 0.29
SRRT-209ENST00000474896 RASSF8Q8NHQ8 419 aa16.87■□□□□ 0.29
SRRT-209ENST00000474896 C2orf15Q8WU43 125 aaKnown RBP16.87■□□□□ 0.29
SRRT-209ENST00000474896 RAD54LQ92698 747 aa16.87■□□□□ 0.29
SRRT-209ENST00000474896 AGO2Q9UKV8 859 aaKnown RBP16.87■□□□□ 0.29
SRRT-209ENST00000474896 C2CD2Q9Y426 696 aa16.87■□□□□ 0.29
SRRT-209ENST00000474896 ATG2BQ96BY7 2078 aa16.86■□□□□ 0.29
SRRT-209ENST00000474896 AXIN1O15169 862 aa16.86■□□□□ 0.29
SRRT-209ENST00000474896 TBCAO75347 108 aaKnown RBP16.86■□□□□ 0.29
SRRT-209ENST00000474896 PDCP20941 246 aa16.86■□□□□ 0.29
SRRT-209ENST00000474896 ABCD1P33897 745 aa16.86■□□□□ 0.29
SRRT-209ENST00000474896 GRIN1Q05586 938 aa16.86■□□□□ 0.29
SRRT-209ENST00000474896 SMARCB1Q12824 385 aa16.86■□□□□ 0.29
SRRT-209ENST00000474896 LARP1BQ659C4 914 aaKnown RBP16.86■□□□□ 0.29
SRRT-209ENST00000474896 MAB21L3Q8N8X9 362 aa16.86■□□□□ 0.29
SRRT-209ENST00000474896 SPPL2BQ8TCT7 592 aa16.86■□□□□ 0.29
SRRT-209ENST00000474896 FAM83CQ9BQN1 747 aa16.86■□□□□ 0.29
SRRT-209ENST00000474896 ABI2Q9NYB9 513 aaPredicted RBP16.86■□□□□ 0.29
SRRT-209ENST00000474896 ACACBO00763 2458 aa16.86■□□□□ 0.29
SRRT-209ENST00000474896 KPNA7A9QM74 516 aa16.85■□□□□ 0.29
SRRT-209ENST00000474896 TULP1O00294 542 aaPredicted RBP16.85■□□□□ 0.29
SRRT-209ENST00000474896 F11P03951 625 aa16.85■□□□□ 0.29
SRRT-209ENST00000474896 DDIT3P35638 169 aa16.85■□□□□ 0.29
SRRT-209ENST00000474896 LONP1P36776 959 aaKnown RBP16.85■□□□□ 0.29
SRRT-209ENST00000474896 AVPR1AP37288 418 aa16.85■□□□□ 0.29
SRRT-209ENST00000474896 PXNP49023 591 aaPredicted RBP16.85■□□□□ 0.29
SRRT-209ENST00000474896 GRSF1Q12849 480 aaKnown RBP eCLIP16.85■□□□□ 0.29
SRRT-209ENST00000474896 RUNX3Q13761 415 aa16.85■□□□□ 0.29
SRRT-209ENST00000474896 TRIM68Q6AZZ1 485 aa16.85■□□□□ 0.29
SRRT-209ENST00000474896 PKN3Q6P5Z2 889 aa16.85■□□□□ 0.29
SRRT-209ENST00000474896 TMEM150AQ86TG1 271 aa16.85■□□□□ 0.29
SRRT-209ENST00000474896 DCP1BQ8IZD4 617 aaKnown RBP16.85■□□□□ 0.29
SRRT-209ENST00000474896 ARRDC1-AS1Q9H2J1 176 aa16.85■□□□□ 0.29
SRRT-209ENST00000474896 IKZF4Q9H2S9 585 aa16.85■□□□□ 0.29
SRRT-209ENST00000474896 EBF3Q9H4W6 596 aa16.85■□□□□ 0.29
SRRT-209ENST00000474896 ZMYM5Q9UJ78 669 aa16.85■□□□□ 0.29
SRRT-209ENST00000474896 CCL26Q9Y258 94 aa16.85■□□□□ 0.29
SRRT-209ENST00000474896 STYXL1Q9Y6J8 313 aa16.85■□□□□ 0.29
SRRT-209ENST00000474896 EPG5Q9HCE0 2579 aa16.84■□□□□ 0.29
SRRT-209ENST00000474896 OTOL1A6NHN0 477 aaPredicted RBP16.84■□□□□ 0.29
SRRT-209ENST00000474896 FOXD2O60548 495 aaPredicted RBP16.84■□□□□ 0.29
SRRT-209ENST00000474896 HMGA1P17096 107 aaKnown RBP16.84■□□□□ 0.29
SRRT-209ENST00000474896 NLRP12P59046 1061 aa16.84■□□□□ 0.29
SRRT-209ENST00000474896 BFSP1Q12934 665 aa16.84■□□□□ 0.29
SRRT-209ENST00000474896 TMEM196Q5HYL7 178 aa16.84■□□□□ 0.29
SRRT-209ENST00000474896 TXNDC8Q6A555 127 aa16.84■□□□□ 0.29
SRRT-209ENST00000474896 FSTL4Q6MZW2 842 aa16.84■□□□□ 0.29
SRRT-209ENST00000474896 CRELD2Q6UXH1 353 aaPredicted RBP16.84■□□□□ 0.29
SRRT-209ENST00000474896 ZNF720Q7Z2F6 126 aa16.84■□□□□ 0.29
SRRT-209ENST00000474896 KRI1Q8N9T8 703 aaKnown RBP16.84■□□□□ 0.29
SRRT-209ENST00000474896 POMGNT1Q8WZA1 660 aa16.84■□□□□ 0.29
SRRT-209ENST00000474896 LARP4BQ92615 738 aaKnown RBP16.84■□□□□ 0.29
SRRT-209ENST00000474896 USP13Q92995 863 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms