RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 TMEM209Q96SK2 561 aa18.13■□□□□ 0.49
SCAF11-206ENST00000474828 MRPL45Q9BRJ2 306 aaKnown RBP18.13■□□□□ 0.49
SCAF11-206ENST00000474828 SDCBP2Q9H190 292 aa18.13■□□□□ 0.49
SCAF11-206ENST00000474828 HSD3B7Q9H2F3 369 aa18.13■□□□□ 0.49
SCAF11-206ENST00000474828 CYP3A43Q9HB55 503 aa18.13■□□□□ 0.49
SCAF11-206ENST00000474828 POLIQ9UNA4 740 aa18.13■□□□□ 0.49
SCAF11-206ENST00000474828 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.13■□□□□ 0.49
SCAF11-206ENST00000474828 GTPBP10A4D1E9 387 aaKnown RBP18.12■□□□□ 0.49
SCAF11-206ENST00000474828 MTMR11A4FU01 709 aa18.12■□□□□ 0.49
SCAF11-206ENST00000474828 SEC24AO95486 1093 aa18.12■□□□□ 0.49
SCAF11-206ENST00000474828 AFPP02771 609 aaKnown RBP18.12■□□□□ 0.49
SCAF11-206ENST00000474828 P4HA1P13674 534 aa18.12■□□□□ 0.49
SCAF11-206ENST00000474828 LMO2P25791 158 aa18.12■□□□□ 0.49
SCAF11-206ENST00000474828 EEF1GP26641 437 aaKnown RBP18.12■□□□□ 0.49
SCAF11-206ENST00000474828 NFKBIBQ15653 356 aa18.12■□□□□ 0.49
SCAF11-206ENST00000474828 SPOPLQ6IQ16 392 aa18.12■□□□□ 0.49
SCAF11-206ENST00000474828 CCDC149Q6ZUS6 474 aa18.12■□□□□ 0.49
SCAF11-206ENST00000474828 GLYCTKQ8IVS8 523 aa18.12■□□□□ 0.49
SCAF11-206ENST00000474828 FAM114A1Q8IWE2 563 aa18.12■□□□□ 0.49
SCAF11-206ENST00000474828 PRKD2Q9BZL6 878 aa18.12■□□□□ 0.49
SCAF11-206ENST00000474828 IMPG2Q9BZV3 1241 aa18.12■□□□□ 0.49
SCAF11-206ENST00000474828 NIF3L1Q9GZT8 377 aa18.12■□□□□ 0.49
SCAF11-206ENST00000474828 CRISPLD1Q9H336 500 aa18.12■□□□□ 0.49
SCAF11-206ENST00000474828 ABCB6Q9NP58 842 aa18.12■□□□□ 0.49
SCAF11-206ENST00000474828 NXF1Q9UBU9 619 aaKnown RBP18.12■□□□□ 0.49
SCAF11-206ENST00000474828 CDH9Q9ULB4 789 aa18.12■□□□□ 0.49
SCAF11-206ENST00000474828 NFE2L3Q9Y4A8 694 aa18.12■□□□□ 0.49
SCAF11-206ENST00000474828 LRRC10BA6NIK2 292 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 RFPL2O75678 378 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 C8AP07357 584 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 OR4Q2P0C623 313 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 SPATA31D3P0C874 917 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 CPB1P15086 417 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 ZNF18P17022 549 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 GNL1P36915 607 aaPredicted RBP18.11■□□□□ 0.49
SCAF11-206ENST00000474828 MYL5Q02045 173 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 NFE2Q16621 373 aaPredicted RBP18.11■□□□□ 0.49
SCAF11-206ENST00000474828 CFAP221Q4G0U5 840 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 MIIPQ5JXC2 388 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 PTCRAQ6ISU1 281 aaPredicted RBP18.11■□□□□ 0.49
SCAF11-206ENST00000474828 SPATA31D4Q6ZUB0 917 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 UNC93AQ86WB7 457 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 DCP1BQ8IZD4 617 aaKnown RBP18.11■□□□□ 0.49
SCAF11-206ENST00000474828 CRYBG2Q8N1P7 616 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 C12orf76Q8N812 135 aaPredicted RBP18.11■□□□□ 0.49
SCAF11-206ENST00000474828 SPPL2BQ8TCT7 592 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 FUBP3Q96I24 572 aaKnown RBP eCLIP18.11■□□□□ 0.49
SCAF11-206ENST00000474828 NECTIN4Q96NY8 510 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 MMS19Q96T76 1030 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 PI4K2AQ9BTU6 479 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 DNAJC25Q9H1X3 360 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 SMYD3Q9H7B4 428 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 AVENQ9NQS1 362 aaPredicted RBP18.11■□□□□ 0.49
SCAF11-206ENST00000474828 SAMSN1Q9NSI8 373 aaKnown RBP18.11■□□□□ 0.49
SCAF11-206ENST00000474828 USP15Q9Y4E8 981 aaPredicted RBP18.11■□□□□ 0.49
SCAF11-206ENST00000474828 C5orf42Q9H799 3197 aa18.11■□□□□ 0.49
SCAF11-206ENST00000474828 CCDC195A0A1B0GUA6 201 aa18.1■□□□□ 0.49
SCAF11-206ENST00000474828 TULP1O00294 542 aaPredicted RBP18.1■□□□□ 0.49
SCAF11-206ENST00000474828 KCNQ1P51787 676 aa18.1■□□□□ 0.49
SCAF11-206ENST00000474828 CDH8P55286 799 aa18.1■□□□□ 0.49
SCAF11-206ENST00000474828 TSPY1Q01534 308 aa18.1■□□□□ 0.49
SCAF11-206ENST00000474828 ADCY1Q08828 1119 aa18.1■□□□□ 0.49
SCAF11-206ENST00000474828 MAN2A1Q16706 1144 aa18.1■□□□□ 0.49
SCAF11-206ENST00000474828 TCP11X2Q5H9J9 407 aa18.1■□□□□ 0.49
SCAF11-206ENST00000474828 LIN9Q5TKA1 542 aa18.1■□□□□ 0.49
SCAF11-206ENST00000474828 TTC39CQ8N584 583 aa18.1■□□□□ 0.49
SCAF11-206ENST00000474828 UBR7Q8N806 425 aa18.1■□□□□ 0.49
SCAF11-206ENST00000474828 SLC7A14Q8TBB6 771 aa18.1■□□□□ 0.49
SCAF11-206ENST00000474828 FEZF2Q8TBJ5 459 aa18.1■□□□□ 0.49
SCAF11-206ENST00000474828 CRTAC1Q9NQ79 661 aa18.1■□□□□ 0.49
SCAF11-206ENST00000474828 TMLHEQ9NVH6 421 aa18.1■□□□□ 0.49
SCAF11-206ENST00000474828 PRKAG3Q9UGI9 489 aa18.1■□□□□ 0.49
SCAF11-206ENST00000474828 FAM50BQ9Y247 325 aa18.1■□□□□ 0.49
SCAF11-206ENST00000474828 INSL5Q9Y5Q6 135 aa18.1■□□□□ 0.49
SCAF11-206ENST00000474828 MYBPHLA2RUH7 354 aa18.09■□□□□ 0.49
SCAF11-206ENST00000474828 HCRTO43612 131 aa18.09■□□□□ 0.49
SCAF11-206ENST00000474828 MTHFRP42898 656 aa18.09■□□□□ 0.49
SCAF11-206ENST00000474828 MAPRE1Q15691 268 aaKnown RBP18.09■□□□□ 0.49
SCAF11-206ENST00000474828 TPD52L1Q16890 204 aaPredicted RBP18.09■□□□□ 0.49
SCAF11-206ENST00000474828 ZSCAN23Q3MJ62 389 aa18.09■□□□□ 0.49
SCAF11-206ENST00000474828 ANO6Q4KMQ2 910 aa18.09■□□□□ 0.49
SCAF11-206ENST00000474828 SLC39A12Q504Y0 691 aa18.09■□□□□ 0.49
SCAF11-206ENST00000474828 RARS2Q5T160 578 aaKnown RBP18.09■□□□□ 0.49
SCAF11-206ENST00000474828 CES5AQ6NT32 575 aa18.09■□□□□ 0.49
SCAF11-206ENST00000474828 TMC5Q6UXY8 1006 aa18.09■□□□□ 0.49
SCAF11-206ENST00000474828 ATAD1Q8NBU5 361 aa18.09■□□□□ 0.49
SCAF11-206ENST00000474828 CCDC150Q8NCX0 1101 aa18.09■□□□□ 0.49
SCAF11-206ENST00000474828 EHBP1Q8NDI1 1231 aa18.09■□□□□ 0.49
SCAF11-206ENST00000474828 MYCBPAPQ8TBZ2 947 aa18.09■□□□□ 0.49
SCAF11-206ENST00000474828 ELMO3Q96BJ8 720 aa18.09■□□□□ 0.49
SCAF11-206ENST00000474828 SYT15Q9BQS2 421 aa18.09■□□□□ 0.49
SCAF11-206ENST00000474828 NAT10Q9H0A0 1025 aaKnown RBP18.09■□□□□ 0.49
SCAF11-206ENST00000474828 MMRN2Q9H8L6 949 aa18.09■□□□□ 0.49
SCAF11-206ENST00000474828 DENND4AQ7Z401 1863 aa18.08■□□□□ 0.49
SCAF11-206ENST00000474828 KCNJ18B7U540 433 aa18.08■□□□□ 0.48
SCAF11-206ENST00000474828 CILPO75339 1184 aa18.08■□□□□ 0.48
SCAF11-206ENST00000474828 CAVIN2O95810 425 aa18.08■□□□□ 0.48
SCAF11-206ENST00000474828 MAGEA11P43364 429 aa18.08■□□□□ 0.48
SCAF11-206ENST00000474828 EPHA5P54756 1037 aa18.08■□□□□ 0.48
SCAF11-206ENST00000474828 ARPP19P56211 112 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms